RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 SLAIN2Q9P270 581 aa23.7■■□□□ 1.38
COL13A1-202ENST00000357811 CTIFO43310 598 aaKnown RBP23.7■■□□□ 1.38
COL13A1-202ENST00000357811 PRKAB2O43741 272 aa23.7■■□□□ 1.38
COL13A1-202ENST00000357811 MAGEB6Q8N7X4 407 aa23.7■■□□□ 1.38
COL13A1-202ENST00000357811 SLC26A6Q9BXS9 759 aa23.7■■□□□ 1.38
COL13A1-202ENST00000357811 LAMB4A4D0S4 1761 aa23.69■■□□□ 1.38
COL13A1-202ENST00000357811 A0A1W2PQ27 194 aa23.69■■□□□ 1.38
COL13A1-202ENST00000357811 A0A1W2PQ64 194 aa23.69■■□□□ 1.38
COL13A1-202ENST00000357811 A0A1W2PQD8 194 aa23.69■■□□□ 1.38
COL13A1-202ENST00000357811 YEATS4O95619 227 aa23.69■■□□□ 1.38
COL13A1-202ENST00000357811 TMEM67Q5HYA8 995 aa23.69■■□□□ 1.38
COL13A1-202ENST00000357811 BTG4Q9NY30 223 aa23.69■■□□□ 1.38
COL13A1-202ENST00000357811 PDE8BO95263 885 aa23.69■■□□□ 1.38
COL13A1-202ENST00000357811 SYKP43405 635 aa23.69■■□□□ 1.38
COL13A1-202ENST00000357811 BRAPQ7Z569 592 aa23.68■■□□□ 1.38
COL13A1-202ENST00000357811 NUP188Q5SRE5 1749 aa23.68■■□□□ 1.38
COL13A1-202ENST00000357811 MBD4O95243 580 aa23.68■■□□□ 1.38
COL13A1-202ENST00000357811 MIGA1Q8NAN2 632 aa23.68■■□□□ 1.38
COL13A1-202ENST00000357811 GOLGA8AA7E2F4 631 aa23.67■■□□□ 1.38
COL13A1-202ENST00000357811 SH2B2O14492 632 aaPredicted RBP23.67■■□□□ 1.38
COL13A1-202ENST00000357811 ZBTB43O43298 467 aa23.67■■□□□ 1.38
COL13A1-202ENST00000357811 RANBP6O60518 1105 aaKnown RBP23.67■■□□□ 1.38
COL13A1-202ENST00000357811 SEC31BQ9NQW1 1179 aa23.67■■□□□ 1.38
COL13A1-202ENST00000357811 GUCY1A2P33402 732 aa23.67■■□□□ 1.38
COL13A1-202ENST00000357811 TRIM28Q13263 835 aaKnown RBP23.67■■□□□ 1.38
COL13A1-202ENST00000357811 SHC4Q6S5L8 630 aa23.67■■□□□ 1.38
COL13A1-202ENST00000357811 ANKRD7Q92527 254 aa23.67■■□□□ 1.38
COL13A1-202ENST00000357811 ZNF215Q9UL58 517 aaPredicted RBP23.67■■□□□ 1.38
COL13A1-202ENST00000357811 KCNJ14Q9UNX9 436 aa23.67■■□□□ 1.38
COL13A1-202ENST00000357811 IFIT3O14879 490 aaKnown RBP23.67■■□□□ 1.38
COL13A1-202ENST00000357811 FOXN1O15353 648 aa23.67■■□□□ 1.38
COL13A1-202ENST00000357811 IARSP41252 1262 aaKnown RBP23.67■■□□□ 1.38
COL13A1-202ENST00000357811 ZSWIM5Q9P217 1185 aa23.67■■□□□ 1.38
COL13A1-202ENST00000357811 TACC3Q9Y6A5 838 aa23.67■■□□□ 1.38
COL13A1-202ENST00000357811 ZMYM6O95789 1325 aa23.66■■□□□ 1.38
COL13A1-202ENST00000357811 ARMCX5Q6P1M9 558 aa23.66■■□□□ 1.38
COL13A1-202ENST00000357811 CCAR2Q8N163 923 aaKnown RBP23.66■■□□□ 1.38
COL13A1-202ENST00000357811 NAPBQ9H115 298 aa23.66■■□□□ 1.38
COL13A1-202ENST00000357811 SMIM22K7EJ46 135 aa23.65■■□□□ 1.38
COL13A1-202ENST00000357811 SLC39A14Q15043 492 aa23.65■■□□□ 1.38
COL13A1-202ENST00000357811 FBXL16Q8N461 479 aa23.65■■□□□ 1.38
COL13A1-202ENST00000357811 VGLL2Q8N8G2 317 aa23.65■■□□□ 1.38
COL13A1-202ENST00000357811 EPB41L4AQ9HCS5 686 aaPredicted RBP23.65■■□□□ 1.38
COL13A1-202ENST00000357811 DZIP3Q86Y13 1208 aaKnown RBP23.65■■□□□ 1.38
COL13A1-202ENST00000357811 DPF2Q92785 391 aa23.65■■□□□ 1.38
COL13A1-202ENST00000357811 CHMP4CQ96CF2 233 aa23.65■■□□□ 1.38
COL13A1-202ENST00000357811 STRBPQ96SI9 672 aaKnown RBP23.65■■□□□ 1.38
COL13A1-202ENST00000357811 MYH15Q9Y2K3 1946 aa23.65■■□□□ 1.38
COL13A1-202ENST00000357811 CMA1P23946 247 aa23.64■■□□□ 1.38
COL13A1-202ENST00000357811 NLRP12P59046 1061 aa23.64■■□□□ 1.37
COL13A1-202ENST00000357811 RBM6P78332 1123 aaKnown RBP23.64■■□□□ 1.37
COL13A1-202ENST00000357811 RASGRF1Q13972 1273 aa23.64■■□□□ 1.37
COL13A1-202ENST00000357811 PLA2G12BQ9BX93 195 aa23.64■■□□□ 1.37
COL13A1-202ENST00000357811 UBN2Q6ZU65 1347 aa23.64■■□□□ 1.37
COL13A1-202ENST00000357811 MYO5AQ9Y4I1 1855 aaKnown RBP23.64■■□□□ 1.37
COL13A1-202ENST00000357811 GRIN1Q05586 938 aa23.64■■□□□ 1.37
COL13A1-202ENST00000357811 TRIM29Q14134 588 aa23.64■■□□□ 1.37
COL13A1-202ENST00000357811 NCAPHQ15003 741 aa23.64■■□□□ 1.37
COL13A1-202ENST00000357811 SMAP1Q8IYB5 467 aaPredicted RBP23.64■■□□□ 1.37
COL13A1-202ENST00000357811 IGDCC4Q8TDY8 1250 aa23.64■■□□□ 1.37
COL13A1-202ENST00000357811 NUP133Q8WUM0 1156 aa23.64■■□□□ 1.37
COL13A1-202ENST00000357811 PAXBP1Q9Y5B6 917 aa23.64■■□□□ 1.37
COL13A1-202ENST00000357811 SLC12A7Q9Y666 1083 aa23.64■■□□□ 1.37
COL13A1-202ENST00000357811 BTBD18B2RXH4 712 aa23.63■■□□□ 1.37
COL13A1-202ENST00000357811 LONRF3Q496Y0 759 aa23.63■■□□□ 1.37
COL13A1-202ENST00000357811 CPLX2Q6PUV4 134 aaKnown RBP23.63■■□□□ 1.37
COL13A1-202ENST00000357811 LY9Q9HBG7 655 aa23.63■■□□□ 1.37
COL13A1-202ENST00000357811 CYP19A1P11511 503 aaPredicted RBP23.63■■□□□ 1.37
COL13A1-202ENST00000357811 PDILTQ8N807 584 aa23.63■■□□□ 1.37
COL13A1-202ENST00000357811 FAM217BQ9NTX9 383 aaPredicted RBP23.63■■□□□ 1.37
COL13A1-202ENST00000357811 FBXO3Q9UK99 471 aa23.63■■□□□ 1.37
COL13A1-202ENST00000357811 hCG_1642624A0A1W2PR95 340 aa23.62■■□□□ 1.37
COL13A1-202ENST00000357811 SFPQP23246 707 aaKnown RBP eCLIP23.62■■□□□ 1.37
COL13A1-202ENST00000357811 BCAMP50895 628 aa23.62■■□□□ 1.37
COL13A1-202ENST00000357811 IFNL3Q8IZI9 196 aa23.62■■□□□ 1.37
COL13A1-202ENST00000357811 SPATA5Q8NB90 893 aa23.62■■□□□ 1.37
COL13A1-202ENST00000357811 TNS2Q63HR2 1409 aa23.62■■□□□ 1.37
COL13A1-202ENST00000357811 WTIPA6NIX2 430 aaPredicted RBP23.62■■□□□ 1.37
COL13A1-202ENST00000357811 SERPINC1P01008 464 aa23.62■■□□□ 1.37
COL13A1-202ENST00000357811 FANCCQ00597 558 aa23.62■■□□□ 1.37
COL13A1-202ENST00000357811 E4F1Q66K89 784 aaPredicted RBP23.62■■□□□ 1.37
COL13A1-202ENST00000357811 ZNF335Q9H4Z2 1342 aaPredicted RBP23.62■■□□□ 1.37
COL13A1-202ENST00000357811 TDO2P48775 406 aa23.61■■□□□ 1.37
COL13A1-202ENST00000357811 TTF1Q15361 905 aaPredicted RBP23.61■■□□□ 1.37
COL13A1-202ENST00000357811 ZNF827Q17R98 1081 aa23.61■■□□□ 1.37
COL13A1-202ENST00000357811 SYT10Q6XYQ8 523 aa23.61■■□□□ 1.37
COL13A1-202ENST00000357811 NYAP1Q6ZVC0 841 aa23.61■■□□□ 1.37
COL13A1-202ENST00000357811 MPHOSPH8Q99549 860 aa23.61■■□□□ 1.37
COL13A1-202ENST00000357811 DCCP43146 1447 aa23.61■■□□□ 1.37
COL13A1-202ENST00000357811 NEMFO60524 1076 aa23.61■■□□□ 1.37
COL13A1-202ENST00000357811 UBE3CQ15386 1083 aa23.61■■□□□ 1.37
COL13A1-202ENST00000357811 CFAP100Q494V2 611 aa23.61■■□□□ 1.37
COL13A1-202ENST00000357811 GRAMD1CQ8IYS0 662 aa23.61■■□□□ 1.37
COL13A1-202ENST00000357811 TEX13AQ9BXU3 409 aaPredicted RBP23.61■■□□□ 1.37
COL13A1-202ENST00000357811 TCRBV5S4A2TA0A5A2 114 aa23.6■■□□□ 1.37
COL13A1-202ENST00000357811 PDE8AO60658 829 aa23.6■■□□□ 1.37
COL13A1-202ENST00000357811 NTRK3Q16288 839 aa23.6■■□□□ 1.37
COL13A1-202ENST00000357811 FOXP4Q8IVH2 680 aaPredicted RBP23.6■■□□□ 1.37
COL13A1-202ENST00000357811 TMEM232C9JQI7 657 aa23.6■■□□□ 1.37
COL13A1-202ENST00000357811 PTPAQ15257 358 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms