RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 IRX3P78415 501 aaPredicted RBP11.79□□□□□ -0.52
FXR1-202ENST00000357559 ITKQ08881 620 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 PPP2R5AQ15172 486 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 CCDC62Q6P9F0 684 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.79□□□□□ -0.52
FXR1-202ENST00000357559 RBM8AQ9Y5S9 174 aaKnown RBP11.79□□□□□ -0.52
FXR1-202ENST00000357559 PLEKHH2Q8IVE3 1493 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 TRAF5O00463 557 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 ANKRD24Q8TF21 1146 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 VPS16Q9H269 839 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 CETN3O15182 167 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 DDX21Q9NR30 783 aaKnown RBP eCLIP11.79□□□□□ -0.52
FXR1-202ENST00000357559 MYO1AQ9UBC5 1043 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 C9orf84Q5VXU9 1444 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 PTPROQ16827 1216 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 TNFAIP3P21580 790 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 CNNM2Q9H8M5 875 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 TFCP2L1Q9NZI6 479 aa11.79□□□□□ -0.52
FXR1-202ENST00000357559 STRN3Q13033 797 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 TRIM68Q6AZZ1 485 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 MORC4Q8TE76 937 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 PICK1Q9NRD5 415 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 NSFL1CQ9UNZ2 370 aaKnown RBP11.78□□□□□ -0.52
FXR1-202ENST00000357559 PA2G4Q9UQ80 394 aaKnown RBP11.78□□□□□ -0.52
FXR1-202ENST00000357559 KIF22Q14807 665 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 TTC22Q5TAA0 569 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 HMG20BQ9P0W2 317 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 MX2P20592 715 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 MCMDC2Q4G0Z9 681 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 KRT28Q7Z3Y7 464 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 CCDC26Q8TAB7 109 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 NOC4LQ9BVI4 516 aaKnown RBP11.78□□□□□ -0.52
FXR1-202ENST00000357559 IRAK4Q9NWZ3 460 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 POLA1P09884 1462 aaPredicted RBP11.78□□□□□ -0.52
FXR1-202ENST00000357559 TNNC1P63316 161 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 PPFIA1Q13136 1202 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 AFAP1L2Q8N4X5 818 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 RNF169Q8NCN4 708 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 WDR97A6NE52 1622 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 B4DLN1 442 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 MRPL12P52815 198 aaKnown RBP11.78□□□□□ -0.52
FXR1-202ENST00000357559 MED10Q9BTT4 135 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 TRIM75PA6NK02 468 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 INPP1P49441 399 aa11.78□□□□□ -0.52
FXR1-202ENST00000357559 TACO1Q9BSH4 297 aaKnown RBP11.78□□□□□ -0.52
FXR1-202ENST00000357559 CLNS1AP54105 237 aaKnown RBP11.77□□□□□ -0.52
FXR1-202ENST00000357559 JDP2Q8WYK2 163 aa11.77□□□□□ -0.52
FXR1-202ENST00000357559 POMGNT1Q8WZA1 660 aa11.77□□□□□ -0.52
FXR1-202ENST00000357559 PARP3Q9Y6F1 533 aa11.77□□□□□ -0.52
FXR1-202ENST00000357559 SETD1BQ9UPS6 1966 aaKnown RBP11.77□□□□□ -0.52
FXR1-202ENST00000357559 AQRO60306 1485 aaKnown RBP eCLIP11.77□□□□□ -0.522e-8■■■■□ 23.5
FXR1-202ENST00000357559 ATAD2Q6PL18 1390 aa11.77□□□□□ -0.52
FXR1-202ENST00000357559 SPTLC2O15270 562 aa11.77□□□□□ -0.52
FXR1-202ENST00000357559 UQCRFS1P1P0C7P4 283 aa11.77□□□□□ -0.52
FXR1-202ENST00000357559 PPP2R3AQ06190 1150 aa11.77□□□□□ -0.52
FXR1-202ENST00000357559 PTPRCP08575 1304 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 RPS6KA2Q15349 733 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 CAPN12Q6ZSI9 719 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 PAG1Q9NWQ8 432 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 ATP5DP30049 168 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 TAB3Q8N5C8 712 aaPredicted RBP11.77□□□□□ -0.53
FXR1-202ENST00000357559 NSMCE1Q8WV22 266 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 CCDC61Q9Y6R9 512 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 NMIQ13287 307 aaPredicted RBP11.77□□□□□ -0.53
FXR1-202ENST00000357559 ANKRD13DQ6ZTN6 518 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 ASIC3Q9UHC3 531 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 PARP1P09874 1014 aaKnown RBP11.77□□□□□ -0.53
FXR1-202ENST00000357559 ASIC2Q16515 512 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 NBPF8Q3BBV2 869 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 NLRP3Q96P20 1036 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 CAMSAP2Q08AD1 1489 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 ALDH1L2Q3SY69 923 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 CCDC125Q86Z20 511 aa11.77□□□□□ -0.53
FXR1-202ENST00000357559 XAB2Q9HCS7 855 aaKnown RBP11.77□□□□□ -0.53
FXR1-202ENST00000357559 FAM135AQ9P2D6 1515 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 XRCC6P12956 609 aaKnown RBP eCLIP11.76□□□□□ -0.53
FXR1-202ENST00000357559 SESN3P58005 492 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 TYRO3Q06418 890 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 MAP7Q14244 749 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 GOLGA6CA6NDK9 693 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 GOLGA6BA6NDN3 693 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 I3L4J1 428 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 GOLGA6DP0CG33 693 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 LRMPQ12912 555 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 NCAPH2Q6IBW4 605 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 KLHL7Q8IXQ5 586 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 RIOK1Q9BRS2 568 aaKnown RBP11.76□□□□□ -0.53
FXR1-202ENST00000357559 ABCF3Q9NUQ8 709 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 GOLGA6AQ9NYA3 693 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 MAGED2Q9UNF1 606 aaPredicted RBP11.76□□□□□ -0.53
FXR1-202ENST00000357559 ZC3H12CQ9C0D7 883 aaKnown RBP11.76□□□□□ -0.53
FXR1-202ENST00000357559 A0A1B0GVL5 298 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 AFAP1L1Q8TED9 768 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 XAGE3Q8WTP9 111 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 PRIMPOLQ96LW4 560 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 TMOD4Q9NZQ9 345 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 LUC7L2Q9Y383 392 aaKnown RBP11.76□□□□□ -0.53
FXR1-202ENST00000357559 SDSP20132 328 aa11.76□□□□□ -0.53
FXR1-202ENST00000357559 PLCB4Q15147 1175 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms