RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 EFCC1Q9HA90 598 aa12.74□□□□□ -0.37
LINC01560-201ENST00000357412 DAGLAQ9Y4D2 1042 aa12.74□□□□□ -0.37
LINC01560-201ENST00000357412 MYH3P11055 1940 aa12.74□□□□□ -0.37
LINC01560-201ENST00000357412 SALL1Q9NSC2 1324 aa12.73□□□□□ -0.37
LINC01560-201ENST00000357412 ADORA1P30542 326 aa12.73□□□□□ -0.37
LINC01560-201ENST00000357412 TAF1CQ15572 869 aaPredicted RBP12.73□□□□□ -0.37
LINC01560-201ENST00000357412 DCAF15Q66K64 600 aa12.73□□□□□ -0.37
LINC01560-201ENST00000357412 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
LINC01560-201ENST00000357412 ARHGAP45Q92619 1136 aa12.73□□□□□ -0.37
LINC01560-201ENST00000357412 HOOK2Q96ED9 719 aa12.73□□□□□ -0.37
LINC01560-201ENST00000357412 ZFYVE28Q9HCC9 887 aa12.73□□□□□ -0.37
LINC01560-201ENST00000357412 GNL3LQ9NVN8 582 aaKnown RBP12.73□□□□□ -0.37
LINC01560-201ENST00000357412 HDAC5Q9UQL6 1122 aa12.73□□□□□ -0.37
LINC01560-201ENST00000357412 RPAP1Q9BWH6 1393 aaPredicted RBP12.72□□□□□ -0.37
LINC01560-201ENST00000357412 BTBD19C9JJ37 291 aa12.72□□□□□ -0.37
LINC01560-201ENST00000357412 SEMA3EO15041 775 aa12.72□□□□□ -0.37
LINC01560-201ENST00000357412 LDHBP07195 334 aaKnown RBP12.72□□□□□ -0.37
LINC01560-201ENST00000357412 CETPP11597 493 aa12.72□□□□□ -0.37
LINC01560-201ENST00000357412 INPP5BP32019 993 aa12.72□□□□□ -0.37
LINC01560-201ENST00000357412 PPIL2Q13356 520 aa12.72□□□□□ -0.37
LINC01560-201ENST00000357412 PRPF38BQ5VTL8 546 aaKnown RBP12.72□□□□□ -0.37
LINC01560-201ENST00000357412 CCDC102BQ68D86 513 aa12.72□□□□□ -0.37
LINC01560-201ENST00000357412 ARMC5Q96C12 935 aa12.72□□□□□ -0.37
LINC01560-201ENST00000357412 ZNF341Q9BYN7 854 aa12.72□□□□□ -0.37
LINC01560-201ENST00000357412 FAM198AQ9UFP1 575 aa12.72□□□□□ -0.37
LINC01560-201ENST00000357412 ZNF112Q9UJU3 913 aa12.72□□□□□ -0.37
LINC01560-201ENST00000357412 DENND2AQ9ULE3 1009 aa12.72□□□□□ -0.37
LINC01560-201ENST00000357412 SPEF2Q9C093 1822 aa12.72□□□□□ -0.37
LINC01560-201ENST00000357412 HTTP42858 3142 aa12.71□□□□□ -0.37
LINC01560-201ENST00000357412 POTEFA5A3E0 1075 aa12.71□□□□□ -0.37
LINC01560-201ENST00000357412 TIMM10P62072 90 aa12.71□□□□□ -0.37
LINC01560-201ENST00000357412 PPATQ06203 517 aa12.71□□□□□ -0.37
LINC01560-201ENST00000357412 TCP10Q12799 353 aa12.71□□□□□ -0.37
LINC01560-201ENST00000357412 SNAPC2Q13487 334 aa12.71□□□□□ -0.37
LINC01560-201ENST00000357412 MTX1Q13505 466 aa12.71□□□□□ -0.37
LINC01560-201ENST00000357412 RASGRF1Q13972 1273 aa12.71□□□□□ -0.37
LINC01560-201ENST00000357412 ZFPM1Q8IX07 1006 aa12.71□□□□□ -0.37
LINC01560-201ENST00000357412 USP40Q9NVE5 1235 aa12.71□□□□□ -0.37
LINC01560-201ENST00000357412 TLR2O60603 784 aa12.7□□□□□ -0.38
LINC01560-201ENST00000357412 ZCCHC17Q9NP64 241 aaKnown RBP12.7□□□□□ -0.38
LINC01560-201ENST00000357412 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.7□□□□□ -0.38
LINC01560-201ENST00000357412 GAKO14976 1311 aa12.69□□□□□ -0.38
LINC01560-201ENST00000357412 A0A1B0GUL7 405 aa12.69□□□□□ -0.38
LINC01560-201ENST00000357412 SRGAP3O43295 1099 aa12.69□□□□□ -0.38
LINC01560-201ENST00000357412 GNAI3P08754 354 aa12.69□□□□□ -0.38
LINC01560-201ENST00000357412 TRIM27P14373 513 aa12.69□□□□□ -0.38
LINC01560-201ENST00000357412 TFCP2Q12800 502 aa12.69□□□□□ -0.38
LINC01560-201ENST00000357412 NOL9Q5SY16 702 aaKnown RBP12.69□□□□□ -0.38
LINC01560-201ENST00000357412 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.69□□□□□ -0.38
LINC01560-201ENST00000357412 FAM163AQ96GL9 167 aaPredicted RBP12.69□□□□□ -0.38
LINC01560-201ENST00000357412 IDI2Q9BXS1 227 aa12.69□□□□□ -0.38
LINC01560-201ENST00000357412 KCNH4Q9UQ05 1017 aa12.69□□□□□ -0.38
LINC01560-201ENST00000357412 TNNQ9UQP3 1299 aa12.69□□□□□ -0.38
LINC01560-201ENST00000357412 ATRNL1Q5VV63 1379 aa12.69□□□□□ -0.38
LINC01560-201ENST00000357412 PDS5AQ29RF7 1337 aaKnown RBP12.68□□□□□ -0.38
LINC01560-201ENST00000357412 BCAR3O75815 825 aa12.68□□□□□ -0.38
LINC01560-201ENST00000357412 MOGSQ13724 837 aa12.68□□□□□ -0.38
LINC01560-201ENST00000357412 ARHGEF6Q15052 776 aa12.68□□□□□ -0.38
LINC01560-201ENST00000357412 SH3BP5LQ7L8J4 393 aa12.68□□□□□ -0.38
LINC01560-201ENST00000357412 ZGPATQ8N5A5 531 aaKnown RBP12.68□□□□□ -0.38
LINC01560-201ENST00000357412 XAGE2Q96GT9 111 aa12.68□□□□□ -0.38
LINC01560-201ENST00000357412 ZNF333Q96JL9 665 aa12.68□□□□□ -0.38
LINC01560-201ENST00000357412 ARHGAP39Q9C0H5 1083 aa12.68□□□□□ -0.38
LINC01560-201ENST00000357412 PTCH2Q9Y6C5 1203 aa12.68□□□□□ -0.38
LINC01560-201ENST00000357412 PHF20L1A8MW92 1017 aa12.67□□□□□ -0.38
LINC01560-201ENST00000357412 ENTPD3O75355 529 aa12.67□□□□□ -0.38
LINC01560-201ENST00000357412 WDHD1O75717 1129 aaPredicted RBP12.67□□□□□ -0.38
LINC01560-201ENST00000357412 RGS3P49796 1198 aa12.67□□□□□ -0.38
LINC01560-201ENST00000357412 LACTBP83111 547 aaPredicted RBP12.67□□□□□ -0.38
LINC01560-201ENST00000357412 C17orf99Q6UX52 265 aa12.67□□□□□ -0.38
LINC01560-201ENST00000357412 ATF7IPQ6VMQ6 1270 aa12.67□□□□□ -0.38
LINC01560-201ENST00000357412 ANKRD23Q86SG2 305 aa12.67□□□□□ -0.38
LINC01560-201ENST00000357412 DDX4Q9NQI0 724 aaKnown RBP12.67□□□□□ -0.38
LINC01560-201ENST00000357412 ABCF2Q9UG63 623 aa12.67□□□□□ -0.38
LINC01560-201ENST00000357412 AKAP2Q9Y2D5 859 aa12.67□□□□□ -0.38
LINC01560-201ENST00000357412 CACNA1FO60840 1977 aa12.67□□□□□ -0.38
LINC01560-201ENST00000357412 PDE4DIPQ5VU43 2346 aa12.66□□□□□ -0.38
LINC01560-201ENST00000357412 CXCL11O14625 94 aa12.66□□□□□ -0.38
LINC01560-201ENST00000357412 IPO8O15397 1037 aaKnown RBP12.66□□□□□ -0.38
LINC01560-201ENST00000357412 GNAI2P04899 355 aa12.66□□□□□ -0.38
LINC01560-201ENST00000357412 SLURP2P0DP57 97 aa12.66□□□□□ -0.38
LINC01560-201ENST00000357412 EN2P19622 333 aaPredicted RBP12.66□□□□□ -0.38
LINC01560-201ENST00000357412 BTDP43251 543 aa12.66□□□□□ -0.38
LINC01560-201ENST00000357412 MAP3K10Q02779 954 aa12.66□□□□□ -0.38
LINC01560-201ENST00000357412 MVPQ14764 893 aaKnown RBP12.66□□□□□ -0.38
LINC01560-201ENST00000357412 DZIP1Q86YF9 867 aaKnown RBP12.66□□□□□ -0.38
LINC01560-201ENST00000357412 ZNF384Q8TF68 577 aa12.66□□□□□ -0.38
LINC01560-201ENST00000357412 CPA4Q9UI42 421 aa12.66□□□□□ -0.38
LINC01560-201ENST00000357412 RFX7Q2KHR2 1363 aa12.66□□□□□ -0.38
LINC01560-201ENST00000357412 GPR75-ASB3A0A0A6YYF3 556 aa12.65□□□□□ -0.38
LINC01560-201ENST00000357412 PNMA6EA0A0J9YXQ4 647 aa12.65□□□□□ -0.38
LINC01560-201ENST00000357412 DDTLA6NHG4 134 aaPredicted RBP12.65□□□□□ -0.38
LINC01560-201ENST00000357412 PDHXO00330 501 aa12.65□□□□□ -0.38
LINC01560-201ENST00000357412 CTGFP29279 349 aa12.65□□□□□ -0.38
LINC01560-201ENST00000357412 RHBDL3P58872 404 aa12.65□□□□□ -0.38
LINC01560-201ENST00000357412 SPTY2D1Q68D10 685 aaPredicted RBP12.65□□□□□ -0.38
LINC01560-201ENST00000357412 GPAT2Q6NUI2 795 aa12.65□□□□□ -0.38
LINC01560-201ENST00000357412 FRAT1Q92837 279 aaPredicted RBP12.65□□□□□ -0.38
LINC01560-201ENST00000357412 CLUAP1Q96AJ1 413 aa12.65□□□□□ -0.38
LINC01560-201ENST00000357412 HMG20BQ9P0W2 317 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms