RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 I3L4J1 428 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 KRT79Q5XKE5 535 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 IQUBQ8NA54 791 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 SPATS2LQ9NUQ6 558 aaKnown RBP14.37□□□□□ -0.11
SMC4-202ENST00000357388 GOLGA8KD6RF30 607 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 IGHDP01880 384 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 HSP90AA5PQ58FG0 334 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 UBL4BQ8N7F7 174 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 PARP2Q9UGN5 583 aa14.37□□□□□ -0.11
SMC4-202ENST00000357388 TTC36A6NLP5 189 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 FAM160A1Q05DH4 1040 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 HHATQ5VTY9 493 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 ZNF526Q8TF50 670 aaPredicted RBP14.36□□□□□ -0.11
SMC4-202ENST00000357388 HIP1RO75146 1068 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 TNNI2P48788 182 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 MUM1Q2TAK8 710 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 NAA16Q6N069 864 aaPredicted RBP14.36□□□□□ -0.11
SMC4-202ENST00000357388 MICAL1Q8TDZ2 1067 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 NOX5Q96PH1 765 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 ATP5J2-PTCD1G3V325 749 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 TMTC1Q8IUR5 882 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 EMILIN1Q9Y6C2 1016 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 SPDYE3A6NKU9 549 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 ARHGAP6O43182 974 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 PDE1CQ14123 709 aaPredicted RBP14.36□□□□□ -0.11
SMC4-202ENST00000357388 ELF2Q15723 593 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 RPAINQ86UA6 219 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 ZCRB1Q8TBF4 217 aaKnown RBP14.36□□□□□ -0.11
SMC4-202ENST00000357388 ZC3H12CQ9C0D7 883 aaKnown RBP14.36□□□□□ -0.11
SMC4-202ENST00000357388 PARP3Q9Y6F1 533 aa14.36□□□□□ -0.11
SMC4-202ENST00000357388 DNAJC8O75937 253 aaPredicted RBP14.35□□□□□ -0.11
SMC4-202ENST00000357388 KRT2P35908 639 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 ATP2B3Q16720 1220 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 MCMDC2Q4G0Z9 681 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 Q6ZUG5 572 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 KIFAP3Q92845 792 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 CARD6Q9BX69 1037 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 ZNF445P59923 1031 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 RHPN1Q8TCX5 695 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 MAK16Q9BXY0 300 aaKnown RBP14.35□□□□□ -0.11
SMC4-202ENST00000357388 UBAP1LF5GYI3 381 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 GJC1P36383 396 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 RILPL1Q5EBL4 403 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 BAIAP2L1Q9UHR4 511 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 CRCPO75575 148 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 SECISBP2LQ93073 1101 aaKnown RBP14.35□□□□□ -0.11
SMC4-202ENST00000357388 SH2D4AQ9H788 454 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 MARCKSP29966 332 aaPredicted RBP14.35□□□□□ -0.11
SMC4-202ENST00000357388 PDE1AP54750 535 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 HAND2P61296 217 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 HSP90AA4PQ58FG1 418 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 GOLGA5Q8TBA6 731 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 SLC4A4Q9Y6R1 1079 aa14.35□□□□□ -0.11
SMC4-202ENST00000357388 SNAPC4Q5SXM2 1469 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 GNAT2P19087 354 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 TPTE2Q6XPS3 522 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 IGSF22Q8N9C0 903 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 MAIP1Q8WWC4 291 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 TRIM4Q9C037 500 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 TTC41PQ6P2S7 1318 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 RLBP1P12271 317 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 ARID5AQ03989 594 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 C8orf34Q49A92 452 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 CCDC170Q8IYT3 715 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 WDR70Q9NW82 654 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 ZNF75DP51815 510 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 NAPAP54920 295 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 SATB1Q01826 763 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 PRR16Q569H4 304 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 SYCE1Q8N0S2 351 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 HAUS8Q9BT25 410 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 FAM204AQ9H8W3 233 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 TXNDC9O14530 226 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 TROVE2P10155 538 aaKnown RBP eCLIP14.34□□□□□ -0.111e-12■■■■■ 61.2
SMC4-202ENST00000357388 MCM7P33993 719 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 BRDTQ58F21 947 aaPredicted RBP14.34□□□□□ -0.11
SMC4-202ENST00000357388 ANKRD20A3Q5VUR7 823 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 SRGAP1Q7Z6B7 1085 aa14.34□□□□□ -0.11
SMC4-202ENST00000357388 HEATR3Q7Z4Q2 680 aa14.33□□□□□ -0.11
SMC4-202ENST00000357388 PI4KAP2A4QPH2 592 aa14.33□□□□□ -0.12
SMC4-202ENST00000357388 E7EVH7 732 aa14.33□□□□□ -0.12
SMC4-202ENST00000357388 ITIH3Q06033 890 aa14.33□□□□□ -0.12
SMC4-202ENST00000357388 PI4KAP1Q8N8J0 262 aa14.33□□□□□ -0.12
SMC4-202ENST00000357388 PLS1Q14651 629 aa14.33□□□□□ -0.12
SMC4-202ENST00000357388 VEZTQ9HBM0 779 aa14.33□□□□□ -0.12
SMC4-202ENST00000357388 CAPN7Q9Y6W3 813 aa14.33□□□□□ -0.12
SMC4-202ENST00000357388 LRRD1A4D1F6 860 aa14.33□□□□□ -0.12
SMC4-202ENST00000357388 IL15P40933 162 aaPredicted RBP14.33□□□□□ -0.12
SMC4-202ENST00000357388 APBA1Q02410 837 aa14.33□□□□□ -0.12
SMC4-202ENST00000357388 SKAP1Q86WV1 359 aa14.33□□□□□ -0.12
SMC4-202ENST00000357388 SH3BP5O60239 455 aa14.32□□□□□ -0.12
SMC4-202ENST00000357388 UTP14CQ5TAP6 766 aaKnown RBP14.32□□□□□ -0.12
SMC4-202ENST00000357388 FCHSD1Q86WN1 690 aa14.32□□□□□ -0.12
SMC4-202ENST00000357388 DDB1Q16531 1140 aa14.32□□□□□ -0.12
SMC4-202ENST00000357388 ANKRD44Q8N8A2 993 aa14.32□□□□□ -0.12
SMC4-202ENST00000357388 LEO1Q8WVC0 666 aaPredicted RBP14.32□□□□□ -0.12
SMC4-202ENST00000357388 P3H4Q92791 437 aa14.32□□□□□ -0.12
SMC4-202ENST00000357388 CLSTN2Q9H4D0 955 aa14.32□□□□□ -0.12
SMC4-202ENST00000357388 RRAGDQ9NQL2 400 aaPredicted RBP14.32□□□□□ -0.12
SMC4-202ENST00000357388 BIN2Q9UBW5 565 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms