RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 PAXIP1Q6ZW49 1069 aaPredicted RBP16.64■□□□□ 0.26
SHANK2-202ENST00000357171 ERICH6Q7L0X2 663 aa16.64■□□□□ 0.26
SHANK2-202ENST00000357171 NSUN4Q96CB9 384 aaKnown RBP16.64■□□□□ 0.26
SHANK2-202ENST00000357171 CDK5RAP2Q96SN8 1893 aa16.64■□□□□ 0.25
SHANK2-202ENST00000357171 TCP10L2B9ZVM9 353 aa16.64■□□□□ 0.25
SHANK2-202ENST00000357171 CYP2E1P05181 493 aaPredicted RBP16.64■□□□□ 0.25
SHANK2-202ENST00000357171 CACNB3P54284 484 aa16.64■□□□□ 0.25
SHANK2-202ENST00000357171 ARMC9Q7Z3E5 817 aa16.64■□□□□ 0.25
SHANK2-202ENST00000357171 AACSQ86V21 672 aa16.64■□□□□ 0.25
SHANK2-202ENST00000357171 RASAL3Q86YV0 1011 aa16.64■□□□□ 0.25
SHANK2-202ENST00000357171 CDAN1Q8IWY9 1227 aa16.64■□□□□ 0.25
SHANK2-202ENST00000357171 SLF2Q8IX21 1173 aa16.64■□□□□ 0.25
SHANK2-202ENST00000357171 ZIC5Q96T25 663 aa16.64■□□□□ 0.25
SHANK2-202ENST00000357171 TMEM39BQ9GZU3 492 aa16.64■□□□□ 0.25
SHANK2-202ENST00000357171 DCTPP1Q9H773 170 aa16.64■□□□□ 0.25
SHANK2-202ENST00000357171 IL1RAPL2Q9NP60 686 aa16.64■□□□□ 0.25
SHANK2-202ENST00000357171 PCDHB15Q9Y5E8 787 aa16.64■□□□□ 0.25
SHANK2-202ENST00000357171 MROH7-TTC4A0A0A0MT08 1334 aa16.63■□□□□ 0.25
SHANK2-202ENST00000357171 AK9Q5TCS8 1911 aa16.63■□□□□ 0.25
SHANK2-202ENST00000357171 GPR75-ASB3A0A0A6YYF3 556 aa16.63■□□□□ 0.25
SHANK2-202ENST00000357171 USP2O75604 605 aaPredicted RBP16.63■□□□□ 0.25
SHANK2-202ENST00000357171 DZIP1Q86YF9 867 aaKnown RBP16.63■□□□□ 0.25
SHANK2-202ENST00000357171 CLASRPQ8N2M8 674 aaKnown RBP16.63■□□□□ 0.25
SHANK2-202ENST00000357171 IDI2Q9BXS1 227 aa16.63■□□□□ 0.25
SHANK2-202ENST00000357171 TMOD2Q9NZR1 351 aa16.63■□□□□ 0.25
SHANK2-202ENST00000357171 FOCADQ5VW36 1801 aa16.62■□□□□ 0.25
SHANK2-202ENST00000357171 PPP1R12BO60237 982 aaPredicted RBP16.62■□□□□ 0.25
SHANK2-202ENST00000357171 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.62■□□□□ 0.25
SHANK2-202ENST00000357171 FAM151AQ8WW52 585 aa16.62■□□□□ 0.25
SHANK2-202ENST00000357171 SNRKQ9NRH2 765 aa16.62■□□□□ 0.25
SHANK2-202ENST00000357171 FAM198AQ9UFP1 575 aa16.62■□□□□ 0.25
SHANK2-202ENST00000357171 ANGEL1Q9UNK9 670 aaKnown RBP16.62■□□□□ 0.25
SHANK2-202ENST00000357171 ZAP70P43403 619 aa16.61■□□□□ 0.25
SHANK2-202ENST00000357171 RHBDL3P58872 404 aa16.61■□□□□ 0.25
SHANK2-202ENST00000357171 NFIAQ12857 509 aa16.61■□□□□ 0.25
SHANK2-202ENST00000357171 GRM1Q13255 1194 aa16.61■□□□□ 0.25
SHANK2-202ENST00000357171 TTLL12Q14166 644 aaPredicted RBP16.61■□□□□ 0.25
SHANK2-202ENST00000357171 CRBNQ96SW2 442 aa16.61■□□□□ 0.25
SHANK2-202ENST00000357171 USP40Q9NVE5 1235 aa16.61■□□□□ 0.25
SHANK2-202ENST00000357171 FZD1Q9UP38 647 aa16.61■□□□□ 0.25
SHANK2-202ENST00000357171 FOXN1O15353 648 aa16.6■□□□□ 0.25
SHANK2-202ENST00000357171 NPM3O75607 178 aaKnown RBP16.6■□□□□ 0.25
SHANK2-202ENST00000357171 MAP4K4O95819 1239 aaPredicted RBP16.6■□□□□ 0.25
SHANK2-202ENST00000357171 LDHCP07864 332 aa16.6■□□□□ 0.25
SHANK2-202ENST00000357171 GSTO1P78417 241 aa16.6■□□□□ 0.25
SHANK2-202ENST00000357171 LRP2BPQ9P2M1 347 aa16.6■□□□□ 0.25
SHANK2-202ENST00000357171 ENTPD3O75355 529 aa16.59■□□□□ 0.25
SHANK2-202ENST00000357171 WDHD1O75717 1129 aaPredicted RBP16.59■□□□□ 0.25
SHANK2-202ENST00000357171 BTDP43251 543 aa16.59■□□□□ 0.25
SHANK2-202ENST00000357171 KIF23Q02241 960 aaPredicted RBP16.59■□□□□ 0.25
SHANK2-202ENST00000357171 AAMPQ13685 434 aa16.59■□□□□ 0.25
SHANK2-202ENST00000357171 PRKG1Q13976 671 aa16.59■□□□□ 0.25
SHANK2-202ENST00000357171 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
SHANK2-202ENST00000357171 LRRCC1Q9C099 1032 aa16.59■□□□□ 0.25
SHANK2-202ENST00000357171 PIH1D3Q9NQM4 214 aaKnown RBP16.59■□□□□ 0.25
SHANK2-202ENST00000357171 RAI14Q9P0K7 980 aa16.59■□□□□ 0.25
SHANK2-202ENST00000357171 APBB1O00213 710 aa16.58■□□□□ 0.24
SHANK2-202ENST00000357171 IFIT2P09913 472 aaKnown RBP16.58■□□□□ 0.24
SHANK2-202ENST00000357171 IREB2P48200 963 aaKnown RBP16.58■□□□□ 0.24
SHANK2-202ENST00000357171 PPP4CP60510 307 aa16.58■□□□□ 0.24
SHANK2-202ENST00000357171 TMED8Q6PL24 325 aaPredicted RBP16.58■□□□□ 0.24
SHANK2-202ENST00000357171 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.58■□□□□ 0.24
SHANK2-202ENST00000357171 CSRNP1Q96S65 589 aa16.58■□□□□ 0.24
SHANK2-202ENST00000357171 ATRNL1Q5VV63 1379 aa16.58■□□□□ 0.24
SHANK2-202ENST00000357171 MYH7P12883 1935 aa16.58■□□□□ 0.24
SHANK2-202ENST00000357171 CA12O43570 354 aa16.57■□□□□ 0.24
SHANK2-202ENST00000357171 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.57■□□□□ 0.24
SHANK2-202ENST00000357171 ANKRD13AQ8IZ07 590 aa16.57■□□□□ 0.24
SHANK2-202ENST00000357171 HOOK2Q96ED9 719 aa16.57■□□□□ 0.24
SHANK2-202ENST00000357171 CLMNQ96JQ2 1002 aa16.57■□□□□ 0.24
SHANK2-202ENST00000357171 ANTXR1Q9H6X2 564 aa16.57■□□□□ 0.24
SHANK2-202ENST00000357171 COL2A1P02458 1487 aaPredicted RBP16.57■□□□□ 0.24
SHANK2-202ENST00000357171 ATP5JP18859 108 aa16.56■□□□□ 0.24
SHANK2-202ENST00000357171 CTCFP49711 727 aaPredicted RBP16.56■□□□□ 0.24
SHANK2-202ENST00000357171 RGS3P49796 1198 aa16.56■□□□□ 0.24
SHANK2-202ENST00000357171 MAP3K10Q02779 954 aa16.56■□□□□ 0.24
SHANK2-202ENST00000357171 SPRYD7Q5W111 196 aa16.56■□□□□ 0.24
SHANK2-202ENST00000357171 NAA16Q6N069 864 aaPredicted RBP16.56■□□□□ 0.24
SHANK2-202ENST00000357171 ADGRA1Q86SQ6 560 aa16.56■□□□□ 0.24
SHANK2-202ENST00000357171 ZFPM1Q8IX07 1006 aa16.56■□□□□ 0.24
SHANK2-202ENST00000357171 AIDAQ96BJ3 306 aa16.56■□□□□ 0.24
SHANK2-202ENST00000357171 DDX4Q9NQI0 724 aaKnown RBP16.56■□□□□ 0.24
SHANK2-202ENST00000357171 NDUFB9Q9Y6M9 179 aa16.56■□□□□ 0.24
SHANK2-202ENST00000357171 ZBTB48P10074 688 aaPredicted RBP16.55■□□□□ 0.24
SHANK2-202ENST00000357171 HSPA8P11142 646 aaKnown RBP16.55■□□□□ 0.24
SHANK2-202ENST00000357171 TM4SF4P48230 202 aa16.55■□□□□ 0.24
SHANK2-202ENST00000357171 TCP10Q12799 353 aa16.55■□□□□ 0.24
SHANK2-202ENST00000357171 SH3BP5LQ7L8J4 393 aa16.55■□□□□ 0.24
SHANK2-202ENST00000357171 SLC10A4Q96EP9 437 aa16.55■□□□□ 0.24
SHANK2-202ENST00000357171 PRDM10Q9NQV6 1147 aa16.55■□□□□ 0.24
SHANK2-202ENST00000357171 ZNF112Q9UJU3 913 aa16.55■□□□□ 0.24
SHANK2-202ENST00000357171 SMARCA5O60264 1052 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-202ENST00000357171 MAP3K9P80192 1104 aa16.54■□□□□ 0.24
SHANK2-202ENST00000357171 HDAC1Q13547 482 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-202ENST00000357171 WNK4Q96J92 1243 aa16.54■□□□□ 0.24
SHANK2-202ENST00000357171 BEGAINQ9BUH8 593 aa16.54■□□□□ 0.24
SHANK2-202ENST00000357171 SAGE1Q9NXZ1 904 aa16.54■□□□□ 0.24
SHANK2-202ENST00000357171 SIPA1L1O43166 1804 aa16.54■□□□□ 0.24
SHANK2-202ENST00000357171 VGLL4Q14135 290 aa16.53■□□□□ 0.24
SHANK2-202ENST00000357171 TTF1Q15361 905 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms