RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 CDC23Q9UJX2 597 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 SUFUQ9UMX1 484 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 UBR2Q8IWV8 1755 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 SURF6O75683 361 aaKnown RBP9.82□□□□□ -0.84
GM2A-201ENST00000357164 HOXB7P09629 217 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 FOSBP53539 338 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 TUBB2AQ13885 445 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 MAP9Q49MG5 647 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 ZNF572Q7Z3I7 529 aaPredicted RBP9.82□□□□□ -0.84
GM2A-201ENST00000357164 TUBB2BQ9BVA1 445 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 IRX2Q9BZI1 471 aaPredicted RBP9.82□□□□□ -0.84
GM2A-201ENST00000357164 CCDC9Q9Y3X0 531 aaKnown RBP9.82□□□□□ -0.84
GM2A-201ENST00000357164 ADGRG1Q9Y653 693 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 CLIC4Q9Y696 253 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 PLEKHG3A1L390 1219 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 ZSCAN12O43309 604 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 ABL1P00519 1130 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 CMA1P23946 247 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 EIF5P55010 431 aaKnown RBP9.82□□□□□ -0.84
GM2A-201ENST00000357164 SKIDA1Q1XH10 827 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 RAD9BQ6WBX8 426 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 TICAM2Q86XR7 235 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 MICALL1Q8N3F8 863 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 PANX2Q96RD6 677 aa9.82□□□□□ -0.84
GM2A-201ENST00000357164 SEC62Q99442 399 aaKnown RBP9.82□□□□□ -0.84
GM2A-201ENST00000357164 HIP1O00291 1037 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 METTL16Q86W50 562 aaKnown RBP9.81□□□□□ -0.84
GM2A-201ENST00000357164 EGFL6Q8IUX8 553 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 AMOTL1Q8IY63 956 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 FSIP1Q8NA03 581 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 TSPYL4Q9UJ04 414 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 SH3TC1Q8TE82 1336 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 A0A1B0GTH6 734 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 ZEB2O60315 1214 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 TFRCP02786 760 aaKnown RBP9.81□□□□□ -0.84
GM2A-201ENST00000357164 CHMP4BP1P59074 171 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 Q6ZUG5 572 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 TRPM3Q9HCF6 1732 aaPredicted RBP9.81□□□□□ -0.84
GM2A-201ENST00000357164 ADAMTS13Q76LX8 1427 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 FLT4P35916 1363 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 ZKSCAN1P17029 563 aaPredicted RBP9.81□□□□□ -0.84
GM2A-201ENST00000357164 WWC2Q6AWC2 1192 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 YTHDF3Q7Z739 585 aaKnown RBP9.81□□□□□ -0.84
GM2A-201ENST00000357164 COG3Q96JB2 828 aa9.81□□□□□ -0.84
GM2A-201ENST00000357164 WDR17Q8IZU2 1322 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 A0A1B0GVL5 298 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 GOLGA6L4A6NEF3 574 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 KIF28PB7ZC32 967 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 RASSF9O75901 435 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 MRPL12P52815 198 aaKnown RBP9.8□□□□□ -0.84
GM2A-201ENST00000357164 SATB1Q01826 763 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 MTF1Q14872 753 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 ZNF662Q6ZS27 426 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 FAM204AQ9H8W3 233 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 HPS5Q9UPZ3 1129 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 PAPPAQ13219 1627 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 POTEB2H3BUK9 544 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 ZNF202O95125 648 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 GGT6Q6P531 493 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 SHC4Q6S5L8 630 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 TBC1D22AQ8WUA7 517 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 ZNF274Q96GC6 653 aaPredicted RBP9.8□□□□□ -0.84
GM2A-201ENST00000357164 C1orf167Q5SNV9 1468 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 MYH6P13533 1939 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 MYH1P12882 1939 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 EPB41P11171 864 aaKnown RBP9.8□□□□□ -0.84
GM2A-201ENST00000357164 SKOR1P84550 965 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 E2F4Q16254 413 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 FAM228AQ86W67 206 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 MNS1Q8NEH6 495 aa9.8□□□□□ -0.84
GM2A-201ENST00000357164 NUDT16Q96DE0 195 aaKnown RBP9.8□□□□□ -0.84
GM2A-201ENST00000357164 PTPDC1A2A3K4 754 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 HSP90AB4PQ58FF6 505 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 GOLGA6L1Q8N7Z2 621 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 NOA1Q8NC60 698 aaKnown RBP9.79□□□□□ -0.84
GM2A-201ENST00000357164 BAG1Q99933 345 aaPredicted RBP9.79□□□□□ -0.84
GM2A-201ENST00000357164 NID2Q14112 1375 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 BECN2A8MW95 431 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 KINO60870 393 aaKnown RBP9.79□□□□□ -0.84
GM2A-201ENST00000357164 PFKFB1P16118 471 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 SF3B2Q13435 895 aaKnown RBP9.79□□□□□ -0.84
GM2A-201ENST00000357164 PREPLQ4J6C6 727 aaPredicted RBP9.79□□□□□ -0.84
GM2A-201ENST00000357164 RESP18Q5W5W9 173 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 TRAPPC11Q7Z392 1133 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 NEK1Q96PY6 1258 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 NBPF3Q9H094 633 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 KIF13BQ9NQT8 1826 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 TARSL2A2RTX5 802 aaKnown RBP9.79□□□□□ -0.84
GM2A-201ENST00000357164 PDIA3P30101 505 aaKnown RBP9.79□□□□□ -0.84
GM2A-201ENST00000357164 RFX5P48382 616 aaPredicted RBP9.79□□□□□ -0.84
GM2A-201ENST00000357164 IRAK1P51617 712 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 MYL5Q02045 173 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 C6orf89Q6UWU4 347 aa9.79□□□□□ -0.84
GM2A-201ENST00000357164 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.79□□□□□ -0.84
GM2A-201ENST00000357164 RNF40O75150 1001 aa9.78□□□□□ -0.84
GM2A-201ENST00000357164 CHGBP05060 677 aa9.78□□□□□ -0.84
GM2A-201ENST00000357164 KRT32Q14532 448 aa9.78□□□□□ -0.84
GM2A-201ENST00000357164 C14orf37Q86TY3 774 aa9.78□□□□□ -0.84
GM2A-201ENST00000357164 MAGEC3Q8TD91 643 aa9.78□□□□□ -0.84
GM2A-201ENST00000357164 AENQ8WTP8 325 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms