RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 NEK4P51957 841 aa21.63■■□□□ 1.05
SMARCD3-202ENST00000356800 STOX1Q6ZVD7 989 aa21.63■■□□□ 1.05
SMARCD3-202ENST00000356800 SDR42E1Q8WUS8 393 aa21.63■■□□□ 1.05
SMARCD3-202ENST00000356800 FAM163AQ96GL9 167 aaPredicted RBP21.63■■□□□ 1.05
SMARCD3-202ENST00000356800 GAKO14976 1311 aa21.62■■□□□ 1.05
SMARCD3-202ENST00000356800 F8W031 263 aaPredicted RBP21.62■■□□□ 1.05
SMARCD3-202ENST00000356800 CPA1P15085 419 aa21.62■■□□□ 1.05
SMARCD3-202ENST00000356800 LTBP3Q9NS15 1303 aa21.62■■□□□ 1.05
SMARCD3-202ENST00000356800 ST18O60284 1047 aa21.61■■□□□ 1.05
SMARCD3-202ENST00000356800 CASTP20810 708 aaKnown RBP21.61■■□□□ 1.05
SMARCD3-202ENST00000356800 PPP4CP60510 307 aa21.61■■□□□ 1.05
SMARCD3-202ENST00000356800 HAND2P61296 217 aa21.61■■□□□ 1.05
SMARCD3-202ENST00000356800 NBPF3Q9H094 633 aa21.61■■□□□ 1.05
SMARCD3-202ENST00000356800 ZSWIM6Q9HCJ5 1215 aa21.61■■□□□ 1.05
SMARCD3-202ENST00000356800 TTF2Q9UNY4 1162 aaKnown RBP21.61■■□□□ 1.05
SMARCD3-202ENST00000356800 GPR75-ASB3A0A0A6YYF3 556 aa21.6■■□□□ 1.05
SMARCD3-202ENST00000356800 PRELPP51888 382 aa21.6■■□□□ 1.05
SMARCD3-202ENST00000356800 IMMTQ16891 758 aaKnown RBP21.6■■□□□ 1.05
SMARCD3-202ENST00000356800 SYT17Q9BSW7 474 aa21.6■■□□□ 1.05
SMARCD3-202ENST00000356800 DAGLAQ9Y4D2 1042 aa21.6■■□□□ 1.05
SMARCD3-202ENST00000356800 BTDP43251 543 aa21.6■■□□□ 1.05
SMARCD3-202ENST00000356800 RASSF7Q02833 373 aa21.6■■□□□ 1.05
SMARCD3-202ENST00000356800 SLF2Q8IX21 1173 aa21.6■■□□□ 1.05
SMARCD3-202ENST00000356800 NIM1KQ8IY84 436 aa21.6■■□□□ 1.05
SMARCD3-202ENST00000356800 SH3RF3Q8TEJ3 882 aaPredicted RBP21.6■■□□□ 1.05
SMARCD3-202ENST00000356800 TTC14Q96N46 770 aa21.6■■□□□ 1.05
SMARCD3-202ENST00000356800 NAPBQ9H115 298 aa21.6■■□□□ 1.05
SMARCD3-202ENST00000356800 ZNRF3Q9ULT6 936 aa21.6■■□□□ 1.05
SMARCD3-202ENST00000356800 E7EWF7 191 aa21.59■■□□□ 1.05
SMARCD3-202ENST00000356800 SCNN1DP51172 638 aa21.59■■□□□ 1.05
SMARCD3-202ENST00000356800 KRT32Q14532 448 aa21.59■■□□□ 1.05
SMARCD3-202ENST00000356800 CRNKL1Q9BZJ0 848 aaKnown RBP21.59■■□□□ 1.05
SMARCD3-202ENST00000356800 NACAP1Q9BZK3 213 aa21.59■■□□□ 1.05
SMARCD3-202ENST00000356800 FOCADQ5VW36 1801 aa21.59■■□□□ 1.05
SMARCD3-202ENST00000356800 K7ELQ4 463 aaPredicted RBP21.58■■□□□ 1.05
SMARCD3-202ENST00000356800 ZNF213O14771 459 aa21.58■■□□□ 1.05
SMARCD3-202ENST00000356800 RAD17O75943 681 aa21.58■■□□□ 1.05
SMARCD3-202ENST00000356800 BAG3O95817 575 aa21.58■■□□□ 1.05
SMARCD3-202ENST00000356800 RUFY3Q7L099 469 aa21.58■■□□□ 1.05
SMARCD3-202ENST00000356800 KIAA0825Q8IV33 1275 aa21.58■■□□□ 1.05
SMARCD3-202ENST00000356800 TIAM2Q8IVF5 1701 aa21.58■■□□□ 1.04
SMARCD3-202ENST00000356800 PSMA5P28066 241 aa21.57■■□□□ 1.04
SMARCD3-202ENST00000356800 TDO2P48775 406 aa21.57■■□□□ 1.04
SMARCD3-202ENST00000356800 TBC1D10CQ8IV04 446 aa21.57■■□□□ 1.04
SMARCD3-202ENST00000356800 CYP46A1Q9Y6A2 500 aa21.57■■□□□ 1.04
SMARCD3-202ENST00000356800 LAMB1P07942 1786 aa21.57■■□□□ 1.04
SMARCD3-202ENST00000356800 NAV1Q8NEY1 1877 aa21.57■■□□□ 1.04
SMARCD3-202ENST00000356800 PSMD14O00487 310 aa21.56■■□□□ 1.04
SMARCD3-202ENST00000356800 VIL1P09327 827 aaKnown RBP21.56■■□□□ 1.04
SMARCD3-202ENST00000356800 RHBDL3P58872 404 aa21.56■■□□□ 1.04
SMARCD3-202ENST00000356800 GIMAP6Q6P9H5 292 aa21.56■■□□□ 1.04
SMARCD3-202ENST00000356800 NEK1Q96PY6 1258 aa21.56■■□□□ 1.04
SMARCD3-202ENST00000356800 NOL10Q9BSC4 688 aaKnown RBP21.56■■□□□ 1.04
SMARCD3-202ENST00000356800 DCP1AQ9NPI6 582 aaPredicted RBP21.56■■□□□ 1.04
SMARCD3-202ENST00000356800 ECM29Q5VYK3 1845 aa21.56■■□□□ 1.04
SMARCD3-202ENST00000356800 RPS6KB1P23443 525 aa21.56■■□□□ 1.04
SMARCD3-202ENST00000356800 MCM2P49736 904 aa21.56■■□□□ 1.04
SMARCD3-202ENST00000356800 BLOC1S2Q6QNY1 142 aa21.56■■□□□ 1.04
SMARCD3-202ENST00000356800 HHIPL2Q6UWX4 724 aa21.56■■□□□ 1.04
SMARCD3-202ENST00000356800 MKRN1Q9UHC7 482 aaKnown RBP21.56■■□□□ 1.04
SMARCD3-202ENST00000356800 SBF1O95248 1867 aa21.55■■□□□ 1.04
SMARCD3-202ENST00000356800 SRCAPQ6ZRS2 3230 aa21.55■■□□□ 1.04
SMARCD3-202ENST00000356800 RSBN1LQ6PCB5 846 aaPredicted RBP21.55■■□□□ 1.04
SMARCD3-202ENST00000356800 GMLQ99445 158 aa21.55■■□□□ 1.04
SMARCD3-202ENST00000356800 MRIQ9BWK5 157 aa21.55■■□□□ 1.04
SMARCD3-202ENST00000356800 ATP8A2Q9NTI2 1148 aa21.55■■□□□ 1.04
SMARCD3-202ENST00000356800 TACC3Q9Y6A5 838 aa21.55■■□□□ 1.04
SMARCD3-202ENST00000356800 DDX60LQ5H9U9 1706 aaKnown RBP21.55■■□□□ 1.04
SMARCD3-202ENST00000356800 DICER1Q9UPY3 1922 aaKnown RBP21.54■■□□□ 1.04
SMARCD3-202ENST00000356800 SMIM22K7EJ46 135 aa21.54■■□□□ 1.04
SMARCD3-202ENST00000356800 CRKP46108 304 aa21.54■■□□□ 1.04
SMARCD3-202ENST00000356800 CTDSPL2Q05D32 466 aa21.54■■□□□ 1.04
SMARCD3-202ENST00000356800 CXCL9Q07325 125 aa21.54■■□□□ 1.04
SMARCD3-202ENST00000356800 CERS3Q8IU89 383 aa21.54■■□□□ 1.04
SMARCD3-202ENST00000356800 TEKT1Q969V4 418 aa21.54■■□□□ 1.04
SMARCD3-202ENST00000356800 PDRG1Q9NUG6 133 aa21.54■■□□□ 1.04
SMARCD3-202ENST00000356800 AK2P54819 239 aa21.53■■□□□ 1.04
SMARCD3-202ENST00000356800 HDLBPQ00341 1268 aaKnown RBP21.53■■□□□ 1.04
SMARCD3-202ENST00000356800 APOBEC3HQ6NTF7 200 aaKnown RBP21.53■■□□□ 1.04
SMARCD3-202ENST00000356800 CTR9Q6PD62 1173 aa21.53■■□□□ 1.04
SMARCD3-202ENST00000356800 JDP2Q8WYK2 163 aa21.53■■□□□ 1.04
SMARCD3-202ENST00000356800 TCEANC2Q96MN5 208 aa21.53■■□□□ 1.04
SMARCD3-202ENST00000356800 PCDHAC2Q9Y5I4 1007 aa21.53■■□□□ 1.04
SMARCD3-202ENST00000356800 CYP2D7A0A087X1C5 515 aa21.53■■□□□ 1.04
SMARCD3-202ENST00000356800 PLCG2P16885 1265 aa21.53■■□□□ 1.04
SMARCD3-202ENST00000356800 NKX2-3Q8TAU0 364 aa21.53■■□□□ 1.04
SMARCD3-202ENST00000356800 TGFBRAP1Q8WUH2 860 aa21.53■■□□□ 1.04
SMARCD3-202ENST00000356800 ZDHHC15Q96MV8 337 aa21.53■■□□□ 1.04
SMARCD3-202ENST00000356800 INCENPQ9NQS7 918 aa21.53■■□□□ 1.04
SMARCD3-202ENST00000356800 MYH1P12882 1939 aa21.52■■□□□ 1.04
SMARCD3-202ENST00000356800 MYO3BQ8WXR4 1341 aa21.52■■□□□ 1.04
SMARCD3-202ENST00000356800 USP17L12C9JPN9 530 aa21.52■■□□□ 1.04
SMARCD3-202ENST00000356800 USP17L21D6R901 530 aa21.52■■□□□ 1.04
SMARCD3-202ENST00000356800 EVX2Q03828 476 aa21.52■■□□□ 1.04
SMARCD3-202ENST00000356800 PPARAQ07869 468 aa21.52■■□□□ 1.04
SMARCD3-202ENST00000356800 ARHGAP27Q6ZUM4 889 aa21.52■■□□□ 1.04
SMARCD3-202ENST00000356800 TEX11Q8IYF3 940 aa21.52■■□□□ 1.04
SMARCD3-202ENST00000356800 ANAPC4Q9UJX5 808 aa21.52■■□□□ 1.04
SMARCD3-202ENST00000356800 ZBTB12Q9Y330 459 aaPredicted RBP21.52■■□□□ 1.04
SMARCD3-202ENST00000356800 MINDY4BA8MYZ0 360 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms