RNA–Protein interactions for RNA: ENST00000356462.10

NEDD4L-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-202ENST00000356462 UQCRHP07919 91 aa17.83■□□□□ 0.44
NEDD4L-202ENST00000356462 UQCRFS1P1P0C7P4 283 aa17.83■□□□□ 0.44
NEDD4L-202ENST00000356462 KRT40Q6A162 431 aa17.83■□□□□ 0.44
NEDD4L-202ENST00000356462 CPLX2Q6PUV4 134 aaKnown RBP17.83■□□□□ 0.44
NEDD4L-202ENST00000356462 SMARCC2Q8TAQ2 1214 aa17.83■□□□□ 0.44
NEDD4L-202ENST00000356462 SETDB2Q96T68 719 aa17.83■□□□□ 0.44
NEDD4L-202ENST00000356462 CLSTN2Q9H4D0 955 aa17.83■□□□□ 0.44
NEDD4L-202ENST00000356462 BTBD18B2RXH4 712 aa17.82■□□□□ 0.44
NEDD4L-202ENST00000356462 TXNRD3Q86VQ6 643 aa17.82■□□□□ 0.44
NEDD4L-202ENST00000356462 ZNF274Q96GC6 653 aaPredicted RBP17.82■□□□□ 0.44
NEDD4L-202ENST00000356462 NR5A1Q13285 461 aa17.82■□□□□ 0.44
NEDD4L-202ENST00000356462 NACAP1Q9BZK3 213 aa17.82■□□□□ 0.44
NEDD4L-202ENST00000356462 DDX19AQ9NUU7 478 aaKnown RBP17.82■□□□□ 0.44
NEDD4L-202ENST00000356462 TRMT1Q9NXH9 659 aaKnown RBP17.82■□□□□ 0.44
NEDD4L-202ENST00000356462 CCNL1Q9UK58 526 aaPredicted RBP17.82■□□□□ 0.44
NEDD4L-202ENST00000356462 SPTLC2O15270 562 aa17.82■□□□□ 0.44
NEDD4L-202ENST00000356462 PRDX5P30044 214 aa17.82■□□□□ 0.44
NEDD4L-202ENST00000356462 CAVIN4Q5BKX8 364 aa17.82■□□□□ 0.44
NEDD4L-202ENST00000356462 FBXO18Q8NFZ0 1043 aa17.82■□□□□ 0.44
NEDD4L-202ENST00000356462 C16orf45Q96MC5 204 aaPredicted RBP17.82■□□□□ 0.44
NEDD4L-202ENST00000356462 GSG1L2A8MUP6 293 aa17.81■□□□□ 0.44
NEDD4L-202ENST00000356462 SMC2O95347 1197 aa17.81■□□□□ 0.44
NEDD4L-202ENST00000356462 CDC5LQ99459 802 aaKnown RBP17.81■□□□□ 0.44
NEDD4L-202ENST00000356462 ZNF219Q9P2Y4 722 aaPredicted RBP17.81■□□□□ 0.44
NEDD4L-202ENST00000356462 ZNF652Q9Y2D9 606 aa17.81■□□□□ 0.44
NEDD4L-202ENST00000356462 CYP2D6P10635 497 aa17.81■□□□□ 0.44
NEDD4L-202ENST00000356462 WTAPQ15007 396 aa17.81■□□□□ 0.44
NEDD4L-202ENST00000356462 MYSM1Q5VVJ2 828 aa17.81■□□□□ 0.44
NEDD4L-202ENST00000356462 MROH5Q6ZUA9 1318 aa17.81■□□□□ 0.44
NEDD4L-202ENST00000356462 NTSR2O95665 410 aa17.8■□□□□ 0.44
NEDD4L-202ENST00000356462 PLA2G12BQ9BX93 195 aa17.8■□□□□ 0.44
NEDD4L-202ENST00000356462 PATL2C9JE40 543 aaKnown RBP17.8■□□□□ 0.44
NEDD4L-202ENST00000356462 CLIP2Q9UDT6 1046 aa17.8■□□□□ 0.44
NEDD4L-202ENST00000356462 MAGEB6P1A0A0J9YX57 407 aa17.8■□□□□ 0.44
NEDD4L-202ENST00000356462 ERVV-1B6SEH8 477 aa17.8■□□□□ 0.44
NEDD4L-202ENST00000356462 F8W031 263 aaPredicted RBP17.8■□□□□ 0.44
NEDD4L-202ENST00000356462 RAD21O60216 631 aa17.8■□□□□ 0.44
NEDD4L-202ENST00000356462 NAA16Q6N069 864 aaPredicted RBP17.8■□□□□ 0.44
NEDD4L-202ENST00000356462 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.8■□□□□ 0.44
NEDD4L-202ENST00000356462 FUCA2Q9BTY2 467 aa17.8■□□□□ 0.44
NEDD4L-202ENST00000356462 CDHR2Q9BYE9 1310 aa17.79■□□□□ 0.44
NEDD4L-202ENST00000356462 USP17L12C9JPN9 530 aa17.79■□□□□ 0.44
NEDD4L-202ENST00000356462 USP17L21D6R901 530 aa17.79■□□□□ 0.44
NEDD4L-202ENST00000356462 COBLO75128 1261 aa17.79■□□□□ 0.44
NEDD4L-202ENST00000356462 LMOD1P29536 600 aaPredicted RBP17.79■□□□□ 0.44
NEDD4L-202ENST00000356462 NOLC1Q14978 699 aaKnown RBP eCLIP17.79■□□□□ 0.44
NEDD4L-202ENST00000356462 STAMQ92783 540 aa17.79■□□□□ 0.44
NEDD4L-202ENST00000356462 MRPS27Q92552 414 aaKnown RBP17.79■□□□□ 0.44
NEDD4L-202ENST00000356462 NLRP3Q96P20 1036 aa17.79■□□□□ 0.44
NEDD4L-202ENST00000356462 LLPHQ9BRT6 129 aaKnown RBP17.79■□□□□ 0.44
NEDD4L-202ENST00000356462 VPS54Q9P1Q0 977 aa17.79■□□□□ 0.44
NEDD4L-202ENST00000356462 FAM205CA6NFA0 338 aa17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 AKAP17AQ02040 695 aaKnown RBP17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 AKNAD1Q5T1N1 836 aa17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 UBE3CQ15386 1083 aa17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 DIXDC1Q155Q3 683 aa17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 ZNF827Q17R98 1081 aa17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 GRAMD1CQ8IYS0 662 aa17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 USP21Q9UK80 565 aa17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 SH2B2O14492 632 aaPredicted RBP17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 OFD1O75665 1012 aa17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 RFC4P35249 363 aa17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 SSRP1Q08945 709 aaKnown RBP17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 DPCR1Q3MIW9 517 aa17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 SAP30BPQ9UHR5 308 aaKnown RBP17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 MINPP1Q9UNW1 487 aa17.78■□□□□ 0.44
NEDD4L-202ENST00000356462 WDHD1O75717 1129 aaPredicted RBP17.77■□□□□ 0.44
NEDD4L-202ENST00000356462 TNS2Q63HR2 1409 aa17.77■□□□□ 0.44
NEDD4L-202ENST00000356462 GRIN1Q05586 938 aa17.77■□□□□ 0.44
NEDD4L-202ENST00000356462 HSP90AA2PQ14568 343 aaPredicted RBP17.77■□□□□ 0.44
NEDD4L-202ENST00000356462 RTN1Q16799 776 aa17.77■□□□□ 0.44
NEDD4L-202ENST00000356462 OXER1Q8TDS5 423 aa17.77■□□□□ 0.44
NEDD4L-202ENST00000356462 FOXN1O15353 648 aa17.77■□□□□ 0.43
NEDD4L-202ENST00000356462 TOM1O60784 492 aa17.77■□□□□ 0.43
NEDD4L-202ENST00000356462 SART3Q15020 963 aaKnown RBP17.77■□□□□ 0.43
NEDD4L-202ENST00000356462 ANO1Q5XXA6 986 aa17.77■□□□□ 0.43
NEDD4L-202ENST00000356462 CABP5Q9NP86 173 aa17.77■□□□□ 0.43
NEDD4L-202ENST00000356462 GNL3LQ9NVN8 582 aaKnown RBP17.77■□□□□ 0.43
NEDD4L-202ENST00000356462 RPS8P62241 208 aaKnown RBP17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 KIF23Q02241 960 aaPredicted RBP17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 GOLGA8FQ08AF8 430 aa17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 GOLGA8DPQ0D2H9 430 aa17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 PNOCQ13519 176 aa17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 LINC00301Q8NCQ3 95 aa17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 KCNF1Q9H3M0 494 aa17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 LY9Q9HBG7 655 aa17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 RCOR1Q9UKL0 485 aa17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 TCRBV5S4A2TA0A5A2 114 aa17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 FGFR2P21802 821 aa17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 CASP1P29466 404 aa17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 PPARAQ07869 468 aa17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 CPVLQ9H3G5 476 aa17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 V9GY48 417 aaPredicted RBP17.76■□□□□ 0.43
NEDD4L-202ENST00000356462 ZNF202O95125 648 aa17.75■□□□□ 0.43
NEDD4L-202ENST00000356462 FAM160A1Q05DH4 1040 aa17.75■□□□□ 0.43
NEDD4L-202ENST00000356462 PARP10Q53GL7 1025 aa17.75■□□□□ 0.43
NEDD4L-202ENST00000356462 FAM196AQ6ZSG2 479 aa17.75■□□□□ 0.43
NEDD4L-202ENST00000356462 DIS3L2Q8IYB7 885 aaKnown RBP17.75■□□□□ 0.43
NEDD4L-202ENST00000356462 XIRP1Q702N8 1843 aaKnown RBP17.75■□□□□ 0.43
NEDD4L-202ENST00000356462 SLC3A2P08195 630 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms