RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 ANKRD36CQ5JPF3 1778 aa16.36■□□□□ 0.21
LSS-201ENST00000356396 GUCY1A2P33402 732 aa16.36■□□□□ 0.21
LSS-201ENST00000356396 ZSCAN23Q3MJ62 389 aa16.36■□□□□ 0.21
LSS-201ENST00000356396 NSUN7Q8NE18 718 aaKnown RBP16.36■□□□□ 0.21
LSS-201ENST00000356396 BRCA2P51587 3418 aa16.36■□□□□ 0.21
LSS-201ENST00000356396 MAGEB6P1A0A0J9YX57 407 aa16.35■□□□□ 0.21
LSS-201ENST00000356396 GTF2IP78347 998 aa16.35■□□□□ 0.21
LSS-201ENST00000356396 PICALMQ13492 652 aa16.35■□□□□ 0.21
LSS-201ENST00000356396 GIMAP6Q6P9H5 292 aa16.35■□□□□ 0.21
LSS-201ENST00000356396 MAPKAPK5Q8IW41 473 aa16.35■□□□□ 0.21
LSS-201ENST00000356396 IFIT3O14879 490 aaKnown RBP16.35■□□□□ 0.21
LSS-201ENST00000356396 FDPSP14324 419 aaKnown RBP16.35■□□□□ 0.21
LSS-201ENST00000356396 TTC6Q86TZ1 520 aa16.35■□□□□ 0.21
LSS-201ENST00000356396 FAM196BA6NMK8 535 aa16.35■□□□□ 0.21
LSS-201ENST00000356396 TRDNQ13061 729 aa16.35■□□□□ 0.21
LSS-201ENST00000356396 MB21D2Q8IYB1 491 aaPredicted RBP16.35■□□□□ 0.21
LSS-201ENST00000356396 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.35■□□□□ 0.21
LSS-201ENST00000356396 TNRC6CQ9HCJ0 1690 aaKnown RBP16.34■□□□□ 0.21
LSS-201ENST00000356396 WDR33Q9C0J8 1336 aaKnown RBP16.34■□□□□ 0.21
LSS-201ENST00000356396 VEGFAP15692 232 aaPredicted RBP16.34■□□□□ 0.21
LSS-201ENST00000356396 TMEM67Q5HYA8 995 aa16.34■□□□□ 0.21
LSS-201ENST00000356396 DZIP1Q86YF9 867 aaKnown RBP16.34■□□□□ 0.21
LSS-201ENST00000356396 CKAP2LQ8IYA6 745 aa16.34■□□□□ 0.21
LSS-201ENST00000356396 NCOA7Q8NI08 942 aa16.34■□□□□ 0.21
LSS-201ENST00000356396 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
LSS-201ENST00000356396 HPS5Q9UPZ3 1129 aa16.34■□□□□ 0.21
LSS-201ENST00000356396 EIF6P56537 245 aaKnown RBP16.34■□□□□ 0.21
LSS-201ENST00000356396 TGFBRAP1Q8WUH2 860 aa16.34■□□□□ 0.21
LSS-201ENST00000356396 GRAPQ13588 217 aa16.33■□□□□ 0.21
LSS-201ENST00000356396 TTF1Q15361 905 aaPredicted RBP16.33■□□□□ 0.21
LSS-201ENST00000356396 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.21
LSS-201ENST00000356396 SH3RF3Q8TEJ3 882 aaPredicted RBP16.33■□□□□ 0.21
LSS-201ENST00000356396 CPLX1O14810 134 aa16.33■□□□□ 0.2
LSS-201ENST00000356396 LIG1P18858 919 aa16.33■□□□□ 0.2
LSS-201ENST00000356396 UBE3CQ15386 1083 aa16.33■□□□□ 0.2
LSS-201ENST00000356396 NSUN4Q96CB9 384 aaKnown RBP16.33■□□□□ 0.2
LSS-201ENST00000356396 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
LSS-201ENST00000356396 BAZ2AQ9UIF9 1905 aaKnown RBP16.33■□□□□ 0.2
LSS-201ENST00000356396 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
LSS-201ENST00000356396 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
LSS-201ENST00000356396 MCM5P33992 734 aa16.32■□□□□ 0.2
LSS-201ENST00000356396 MCM9Q9NXL9 1143 aa16.32■□□□□ 0.2
LSS-201ENST00000356396 KCNJ14Q9UNX9 436 aa16.32■□□□□ 0.2
LSS-201ENST00000356396 C4BP0C0L5 1744 aa16.32■□□□□ 0.2
LSS-201ENST00000356396 ST5P78524 1137 aa16.32■□□□□ 0.2
LSS-201ENST00000356396 UBE4AQ14139 1066 aa16.32■□□□□ 0.2
LSS-201ENST00000356396 SHROOM1Q2M3G4 852 aaPredicted RBP16.32■□□□□ 0.2
LSS-201ENST00000356396 RBSNQ9H1K0 784 aa16.32■□□□□ 0.2
LSS-201ENST00000356396 COL5A3P25940 1745 aaPredicted RBP16.32■□□□□ 0.2
LSS-201ENST00000356396 RAD21O60216 631 aa16.32■□□□□ 0.2
LSS-201ENST00000356396 KRT32Q14532 448 aa16.32■□□□□ 0.2
LSS-201ENST00000356396 SLC10A5Q5PT55 438 aa16.32■□□□□ 0.2
LSS-201ENST00000356396 MYH13Q9UKX3 1938 aa16.31■□□□□ 0.2
LSS-201ENST00000356396 ZBTB7AO95365 584 aa16.31■□□□□ 0.2
LSS-201ENST00000356396 SPECC1Q5M775 1068 aa16.31■□□□□ 0.2
LSS-201ENST00000356396 MFSD6Q6ZSS7 791 aa16.31■□□□□ 0.2
LSS-201ENST00000356396 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
LSS-201ENST00000356396 FBXO33Q7Z6M2 555 aa16.31■□□□□ 0.2
LSS-201ENST00000356396 SH2B1Q9NRF2 756 aaPredicted RBP16.31■□□□□ 0.2
LSS-201ENST00000356396 GNL3LQ9NVN8 582 aaKnown RBP16.31■□□□□ 0.2
LSS-201ENST00000356396 ORC3Q9UBD5 711 aaPredicted RBP16.31■□□□□ 0.2
LSS-201ENST00000356396 MRVI1Q9Y6F6 885 aa16.31■□□□□ 0.2
LSS-201ENST00000356396 CEP350Q5VT06 3117 aa16.3■□□□□ 0.2
LSS-201ENST00000356396 KIF28PB7ZC32 967 aa16.3■□□□□ 0.2
LSS-201ENST00000356396 PPARAQ07869 468 aa16.3■□□□□ 0.2
LSS-201ENST00000356396 ATF5Q9Y2D1 282 aaPredicted RBP16.3■□□□□ 0.2
LSS-201ENST00000356396 PNPLA7Q6ZV29 1317 aa16.3■□□□□ 0.2
LSS-201ENST00000356396 PLCD1P51178 756 aa16.3■□□□□ 0.2
LSS-201ENST00000356396 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
LSS-201ENST00000356396 MFSD14BQ5SR56 506 aa16.3■□□□□ 0.2
LSS-201ENST00000356396 ZSCAN31Q96LW9 406 aaPredicted RBP16.3■□□□□ 0.2
LSS-201ENST00000356396 SLC26A6Q9BXS9 759 aa16.3■□□□□ 0.2
LSS-201ENST00000356396 GRPEL1Q9HAV7 217 aa16.3■□□□□ 0.2
LSS-201ENST00000356396 THSD7AQ9UPZ6 1657 aa16.3■□□□□ 0.2
LSS-201ENST00000356396 USP17L3A6NCW0 530 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 USP17L4A6NCW7 530 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 ADAMTS3O15072 1205 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 ISM2Q6H9L7 571 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 USP17L1Q7RTZ2 530 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.29■□□□□ 0.2
LSS-201ENST00000356396 UIMC1Q96RL1 719 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 SBF2Q86WG5 1849 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 EIF5BO60841 1220 aaKnown RBP16.29■□□□□ 0.2
LSS-201ENST00000356396 MARCKSP29966 332 aaPredicted RBP16.29■□□□□ 0.2
LSS-201ENST00000356396 TCP10Q12799 353 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 KLHL40Q2TBA0 621 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 ZSCAN25Q6NSZ9 544 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 CTNNA3Q9UI47 895 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 TSGA10IPQ3SY00 556 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 KIAA0825Q8IV33 1275 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 CD209Q9NNX6 404 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 LAMA4Q16363 1823 aa16.29■□□□□ 0.2
LSS-201ENST00000356396 USP5P45974 858 aa16.28■□□□□ 0.2
LSS-201ENST00000356396 METAP2P50579 478 aaKnown RBP eCLIP16.28■□□□□ 0.2
LSS-201ENST00000356396 CTR9Q6PD62 1173 aa16.28■□□□□ 0.2
LSS-201ENST00000356396 TBC1D16Q8TBP0 767 aa16.28■□□□□ 0.2
LSS-201ENST00000356396 USP28Q96RU2 1077 aa16.28■□□□□ 0.2
LSS-201ENST00000356396 FAM205CA6NFA0 338 aa16.28■□□□□ 0.2
LSS-201ENST00000356396 PFKFB2O60825 505 aa16.28■□□□□ 0.2
LSS-201ENST00000356396 GOLGA8HP0CJ92 632 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms