RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 MGEA5O60502 916 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 LDHBP07195 334 aaKnown RBP19.29■□□□□ 0.68
COL27A1-201ENST00000356083 UBE2HP62256 183 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 IL1RL1Q01638 556 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 RAD51AP2Q09MP3 1159 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 PCK1P35558 622 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 RABEP2Q9H5N1 569 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 GPR162Q16538 588 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 LETM2Q2VYF4 491 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 ECHDC1Q9NTX5 307 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 INPP1P49441 399 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 PDCD7Q8N8D1 485 aaKnown RBP19.29■□□□□ 0.68
COL27A1-201ENST00000356083 FAM83GA6ND36 823 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 SLC39A6Q13433 755 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 TMTC2Q8N394 836 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 UQCRFS1P1P0C7P4 283 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 BRF1Q92994 677 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 TBC1D7Q9P0N9 293 aa19.29■□□□□ 0.68
COL27A1-201ENST00000356083 IFNL2Q8IZJ0 200 aa19.28■□□□□ 0.68
COL27A1-201ENST00000356083 NYXQ9GZU5 481 aa19.28■□□□□ 0.68
COL27A1-201ENST00000356083 CNNM2Q9H8M5 875 aa19.28■□□□□ 0.68
COL27A1-201ENST00000356083 KIF9Q9HAQ2 790 aa19.28■□□□□ 0.68
COL27A1-201ENST00000356083 FNDC3AQ9Y2H6 1198 aaKnown RBP19.28■□□□□ 0.68
COL27A1-201ENST00000356083 BICDL2A1A5D9 508 aa19.28■□□□□ 0.68
COL27A1-201ENST00000356083 TRAF5O00463 557 aa19.28■□□□□ 0.68
COL27A1-201ENST00000356083 PRPF6O94906 941 aaKnown RBP19.28■□□□□ 0.68
COL27A1-201ENST00000356083 DCUN1D2Q6PH85 259 aa19.28■□□□□ 0.68
COL27A1-201ENST00000356083 SEPT8Q92599 483 aa19.28■□□□□ 0.68
COL27A1-201ENST00000356083 LACTBP83111 547 aaPredicted RBP19.28■□□□□ 0.68
COL27A1-201ENST00000356083 SRGAP1Q7Z6B7 1085 aa19.28■□□□□ 0.68
COL27A1-201ENST00000356083 CDAN1Q8IWY9 1227 aa19.28■□□□□ 0.68
COL27A1-201ENST00000356083 CNPY2Q9Y2B0 182 aa19.27■□□□□ 0.68
COL27A1-201ENST00000356083 CCDC171Q6TFL3 1326 aa19.27■□□□□ 0.68
COL27A1-201ENST00000356083 CETN3O15182 167 aa19.27■□□□□ 0.68
COL27A1-201ENST00000356083 POMGNT1Q8WZA1 660 aa19.27■□□□□ 0.68
COL27A1-201ENST00000356083 CSRNP2Q9H175 543 aa19.27■□□□□ 0.68
COL27A1-201ENST00000356083 VWA3AA6NCI4 1184 aa19.27■□□□□ 0.68
COL27A1-201ENST00000356083 RBBP5Q15291 538 aaKnown RBP19.27■□□□□ 0.68
COL27A1-201ENST00000356083 CCDC24Q8N4L8 307 aa19.27■□□□□ 0.68
COL27A1-201ENST00000356083 MRPL46Q9H2W6 279 aaKnown RBP19.27■□□□□ 0.68
COL27A1-201ENST00000356083 ZSCAN16Q9H4T2 348 aaPredicted RBP19.27■□□□□ 0.68
COL27A1-201ENST00000356083 UTP11Q9Y3A2 253 aaKnown RBP19.27■□□□□ 0.68
COL27A1-201ENST00000356083 KRT83P78385 493 aa19.27■□□□□ 0.67
COL27A1-201ENST00000356083 PPP2R5AQ15172 486 aa19.27■□□□□ 0.67
COL27A1-201ENST00000356083 ABCF3Q9NUQ8 709 aa19.27■□□□□ 0.67
COL27A1-201ENST00000356083 ITM2BQ9Y287 266 aa19.27■□□□□ 0.67
COL27A1-201ENST00000356083 PLEKHH1Q9ULM0 1364 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 FBXW4P57775 412 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 FBXO31Q5XUX0 539 aaPredicted RBP19.26■□□□□ 0.67
COL27A1-201ENST00000356083 GSTA1P08263 222 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 GSTA2P09210 222 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 LCA5Q86VQ0 697 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 ST7Q9NRC1 585 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 SMIM24O75264 130 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 SKILP12757 684 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 CASP2P42575 452 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 CDR2Q01850 454 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 FYB2Q5VWT5 728 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 ANKRD24Q8TF21 1146 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 TBC1D8O95759 1140 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 SNRPA1P09661 255 aaKnown RBP19.26■□□□□ 0.67
COL27A1-201ENST00000356083 TNFAIP3P21580 790 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 SPC25Q9HBM1 224 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 PAXBP1Q9Y5B6 917 aa19.26■□□□□ 0.67
COL27A1-201ENST00000356083 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.26■□□□□ 0.67
COL27A1-201ENST00000356083 ZNF853P0CG23 659 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 MX2P20592 715 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 TNPO1Q92973 898 aaKnown RBP19.25■□□□□ 0.67
COL27A1-201ENST00000356083 AMOTL2Q9Y2J4 779 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 PAGR1Q9BTK6 254 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 EMILIN1Q9Y6C2 1016 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 CUX1P39880 1505 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 VAV2P52735 878 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 RYBPQ8N488 228 aaPredicted RBP19.25■□□□□ 0.67
COL27A1-201ENST00000356083 KCNG4Q8TDN1 519 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 SLC52A1Q9NWF4 448 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 UTP14CQ5TAP6 766 aaKnown RBP19.25■□□□□ 0.67
COL27A1-201ENST00000356083 CHPF2Q9P2E5 772 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 PHF8Q9UPP1 1060 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 TOM1O60784 492 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 CALML3P27482 149 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 PPFIBP2Q8ND30 876 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 TRIM75PA6NK02 468 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 PARP1P09874 1014 aaKnown RBP19.25■□□□□ 0.67
COL27A1-201ENST00000356083 MGARPQ8TDB4 240 aa19.25■□□□□ 0.67
COL27A1-201ENST00000356083 HP1BP3Q5SSJ5 553 aaPredicted RBP19.24■□□□□ 0.67
COL27A1-201ENST00000356083 ZCRB1Q8TBF4 217 aaKnown RBP19.24■□□□□ 0.67
COL27A1-201ENST00000356083 LRPPRCP42704 1394 aaKnown RBP19.24■□□□□ 0.67
COL27A1-201ENST00000356083 CCDC26Q8TAB7 109 aa19.24■□□□□ 0.67
COL27A1-201ENST00000356083 FAM193BQ96PV7 902 aaPredicted RBP19.24■□□□□ 0.67
COL27A1-201ENST00000356083 EBAG9O00559 213 aa19.24■□□□□ 0.67
COL27A1-201ENST00000356083 SLC4A1P02730 911 aa19.24■□□□□ 0.67
COL27A1-201ENST00000356083 CCDC62Q6P9F0 684 aa19.24■□□□□ 0.67
COL27A1-201ENST00000356083 TPTE2Q6XPS3 522 aa19.24■□□□□ 0.67
COL27A1-201ENST00000356083 CXorf38Q8TB03 319 aa19.24■□□□□ 0.67
COL27A1-201ENST00000356083 CTNND2Q9UQB3 1225 aa19.24■□□□□ 0.67
COL27A1-201ENST00000356083 GNA11P29992 359 aa19.24■□□□□ 0.67
COL27A1-201ENST00000356083 TCIRG1Q13488 830 aa19.24■□□□□ 0.67
COL27A1-201ENST00000356083 DDB1Q16531 1140 aa19.24■□□□□ 0.67
COL27A1-201ENST00000356083 DZIP3Q86Y13 1208 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms