RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 TTF1Q15361 905 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-202ENST00000355815 CCDC102BQ68D86 513 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 STAMQ92783 540 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 NGLY1Q96IV0 654 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 PUS7LQ9H0K6 701 aaKnown RBP16.05■□□□□ 0.16
SREBF1-202ENST00000355815 M0R2C6 588 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 USP5P45974 858 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 KAZALD1Q96I82 304 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 ZBTB1Q9Y2K1 713 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 NBPF26B4DH59 902 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 ZEB2O60315 1214 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 SSBP05455 408 aaKnown RBP eCLIP16.05■□□□□ 0.16
SREBF1-202ENST00000355815 NEFHP12036 1026 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 DDB1Q16531 1140 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 MAP9Q49MG5 647 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 NBPF14Q5TI25 921 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 NBPF10Q6P3W6 841 aaKnown RBP16.05■□□□□ 0.16
SREBF1-202ENST00000355815 NBPF15Q8N660 670 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 ERO1AQ96HE7 468 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 MKNK2Q9HBH9 465 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 MAST3O60307 1309 aa16.04■□□□□ 0.16
SREBF1-202ENST00000355815 PDIA3P30101 505 aaKnown RBP16.04■□□□□ 0.16
SREBF1-202ENST00000355815 HLTFQ14527 1009 aaKnown RBP eCLIP16.04■□□□□ 0.16
SREBF1-202ENST00000355815 IQCA1Q86XH1 822 aa16.04■□□□□ 0.16
SREBF1-202ENST00000355815 ATRIPQ8WXE1 791 aa16.04■□□□□ 0.16
SREBF1-202ENST00000355815 STX8Q9UNK0 236 aa16.04■□□□□ 0.16
SREBF1-202ENST00000355815 RTN1Q16799 776 aa16.04■□□□□ 0.16
SREBF1-202ENST00000355815 KCNG4Q8TDN1 519 aa16.04■□□□□ 0.16
SREBF1-202ENST00000355815 JADE2Q9NQC1 790 aa16.04■□□□□ 0.16
SREBF1-202ENST00000355815 TMEM131LA2VDJ0 1609 aa16.04■□□□□ 0.16
SREBF1-202ENST00000355815 FAM160A1Q05DH4 1040 aa16.04■□□□□ 0.16
SREBF1-202ENST00000355815 CCDC150Q8NCX0 1101 aa16.04■□□□□ 0.16
SREBF1-202ENST00000355815 TSPY2A6NKD2 308 aa16.03■□□□□ 0.16
SREBF1-202ENST00000355815 NLRP5P59047 1200 aa16.03■□□□□ 0.16
SREBF1-202ENST00000355815 DZIP1Q86YF9 867 aaKnown RBP16.03■□□□□ 0.16
SREBF1-202ENST00000355815 PLIN2Q99541 437 aa16.03■□□□□ 0.16
SREBF1-202ENST00000355815 CLIC4Q9Y696 253 aa16.03■□□□□ 0.16
SREBF1-202ENST00000355815 TXLNAP40222 546 aa16.03■□□□□ 0.16
SREBF1-202ENST00000355815 BCAMP50895 628 aa16.03■□□□□ 0.16
SREBF1-202ENST00000355815 HLFQ16534 295 aa16.03■□□□□ 0.16
SREBF1-202ENST00000355815 DHX58Q96C10 678 aa16.03■□□□□ 0.16
SREBF1-202ENST00000355815 GOLGA6L7A0A1B0GV03 622 aa16.02■□□□□ 0.16
SREBF1-202ENST00000355815 MTX1Q13505 466 aa16.02■□□□□ 0.16
SREBF1-202ENST00000355815 CTCFLQ8NI51 663 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-202ENST00000355815 MRVI1Q9Y6F6 885 aa16.02■□□□□ 0.16
SREBF1-202ENST00000355815 ZPR1O75312 459 aa16.02■□□□□ 0.16
SREBF1-202ENST00000355815 IKQ13123 557 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-202ENST00000355815 CAPZA3Q96KX2 299 aa16.02■□□□□ 0.16
SREBF1-202ENST00000355815 GDAP1L1Q96MZ0 367 aa16.02■□□□□ 0.16
SREBF1-202ENST00000355815 CLIC6Q96NY7 704 aa16.02■□□□□ 0.16
SREBF1-202ENST00000355815 CABP5Q9NP86 173 aa16.02■□□□□ 0.16
SREBF1-202ENST00000355815 SEC31BQ9NQW1 1179 aa16.02■□□□□ 0.16
SREBF1-202ENST00000355815 ZNF219Q9P2Y4 722 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-202ENST00000355815 UQCRFS1P1P0C7P4 283 aa16.02■□□□□ 0.15
SREBF1-202ENST00000355815 BRD2P25440 801 aaKnown RBP16.02■□□□□ 0.15
SREBF1-202ENST00000355815 ZNF75DP51815 510 aa16.02■□□□□ 0.15
SREBF1-202ENST00000355815 PPP2R3AQ06190 1150 aa16.02■□□□□ 0.15
SREBF1-202ENST00000355815 NAA30Q147X3 362 aaPredicted RBP16.02■□□□□ 0.15
SREBF1-202ENST00000355815 FAM182BQ5T319 152 aa16.02■□□□□ 0.15
SREBF1-202ENST00000355815 NSUN7Q8NE18 718 aaKnown RBP16.02■□□□□ 0.15
SREBF1-202ENST00000355815 DYDC1Q8WWB3 177 aa16.02■□□□□ 0.15
SREBF1-202ENST00000355815 ANGEL1Q9UNK9 670 aaKnown RBP16.02■□□□□ 0.15
SREBF1-202ENST00000355815 CDC42BPGQ6DT37 1551 aa16.02■□□□□ 0.15
SREBF1-202ENST00000355815 SHPRHQ149N8 1683 aa16.02■□□□□ 0.15
SREBF1-202ENST00000355815 PREX1Q8TCU6 1659 aa16.02■□□□□ 0.15
SREBF1-202ENST00000355815 IVLP07476 585 aa16.02■□□□□ 0.15
SREBF1-202ENST00000355815 CCDC152Q4G0S7 254 aa16.02■□□□□ 0.15
SREBF1-202ENST00000355815 SDR42E1Q8WUS8 393 aa16.02■□□□□ 0.15
SREBF1-202ENST00000355815 TFCP2L1Q9NZI6 479 aa16.02■□□□□ 0.15
SREBF1-202ENST00000355815 GOLGA6L10A0A0M3HER8 536 aa16.01■□□□□ 0.15
SREBF1-202ENST00000355815 SCARF1Q14162 830 aa16.01■□□□□ 0.15
SREBF1-202ENST00000355815 ARID5BQ14865 1188 aa16.01■□□□□ 0.15
SREBF1-202ENST00000355815 ZNF202O95125 648 aa16.01■□□□□ 0.15
SREBF1-202ENST00000355815 SF3A3Q12874 501 aaKnown RBP eCLIP16.01■□□□□ 0.154e-7■■■■□ 20.8
SREBF1-202ENST00000355815 ANO1Q5XXA6 986 aa16.01■□□□□ 0.15
SREBF1-202ENST00000355815 KRT40Q6A162 431 aa16.01■□□□□ 0.15
SREBF1-202ENST00000355815 SMIM5Q71RC9 77 aa16.01■□□□□ 0.15
SREBF1-202ENST00000355815 WASF1Q92558 559 aa16.01■□□□□ 0.15
SREBF1-202ENST00000355815 PCDHA7Q9UN72 937 aa16.01■□□□□ 0.15
SREBF1-202ENST00000355815 CCDC196A0A1B0GTZ2 297 aa16.01■□□□□ 0.15
SREBF1-202ENST00000355815 GBP2P32456 591 aaPredicted RBP16.01■□□□□ 0.15
SREBF1-202ENST00000355815 CATIPQ7Z7H3 387 aa16.01■□□□□ 0.15
SREBF1-202ENST00000355815 MAATS1Q7Z4T9 603 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 ANKRD18AQ8IVF6 992 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 MAPK8IP1Q9UQF2 711 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 CTAGE15A4D2H0 777 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 CTAGE8P0CG41 777 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 PDIA6Q15084 440 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 ZSCAN26Q16670 478 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 CTAGE6Q86UF2 777 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 CTAGE4Q8IX94 777 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 EBAG9O00559 213 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 NDUFA8P51970 172 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 ZNF827Q17R98 1081 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 C11orf57Q6ZUT1 292 aaPredicted RBP16■□□□□ 0.15
SREBF1-202ENST00000355815 STOX1Q6ZVD7 989 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 PGBD1Q96JS3 809 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 PRM3Q9NNZ6 103 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 ZNF652Q9Y2D9 606 aa16■□□□□ 0.15
SREBF1-202ENST00000355815 PRKAB2O43741 272 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms