RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 CTCFLQ8NI51 663 aaPredicted RBP17.43■□□□□ 0.38
STRN3-201ENST00000355683 EPC1Q9H2F5 836 aa17.43■□□□□ 0.38
STRN3-201ENST00000355683 KDRP35968 1356 aa17.43■□□□□ 0.38
STRN3-201ENST00000355683 SLIT1O75093 1534 aa17.43■□□□□ 0.38
STRN3-201ENST00000355683 ZNF500O60304 480 aaPredicted RBP17.43■□□□□ 0.38
STRN3-201ENST00000355683 CAVIN4Q5BKX8 364 aa17.43■□□□□ 0.38
STRN3-201ENST00000355683 IQCA1Q86XH1 822 aa17.43■□□□□ 0.38
STRN3-201ENST00000355683 VPS16Q9H269 839 aa17.43■□□□□ 0.38
STRN3-201ENST00000355683 ZBTB1Q9Y2K1 713 aa17.43■□□□□ 0.38
STRN3-201ENST00000355683 N4BP3O15049 544 aa17.42■□□□□ 0.38
STRN3-201ENST00000355683 HS1BP3Q53T59 392 aa17.42■□□□□ 0.38
STRN3-201ENST00000355683 TSPYL1Q9H0U9 437 aa17.42■□□□□ 0.38
STRN3-201ENST00000355683 ERBB3P21860 1342 aa17.42■□□□□ 0.38
STRN3-201ENST00000355683 MYO3AQ8NEV4 1616 aa17.42■□□□□ 0.38
STRN3-201ENST00000355683 NR5A1Q13285 461 aa17.42■□□□□ 0.38
STRN3-201ENST00000355683 SF3B2Q13435 895 aaKnown RBP17.42■□□□□ 0.38
STRN3-201ENST00000355683 KCNG4Q8TDN1 519 aa17.42■□□□□ 0.38
STRN3-201ENST00000355683 SAP30BPQ9UHR5 308 aaKnown RBP17.42■□□□□ 0.38
STRN3-201ENST00000355683 CTAGE5O15320 804 aa17.42■□□□□ 0.38
STRN3-201ENST00000355683 RHOXF2BP0C7M4 288 aa17.42■□□□□ 0.38
STRN3-201ENST00000355683 PSMB7Q99436 277 aa17.42■□□□□ 0.38
STRN3-201ENST00000355683 RHOXF2Q9BQY4 288 aa17.42■□□□□ 0.38
STRN3-201ENST00000355683 SRRTQ9BXP5 876 aaKnown RBP17.42■□□□□ 0.38
STRN3-201ENST00000355683 AP5Z1O43299 807 aa17.41■□□□□ 0.38
STRN3-201ENST00000355683 MTX1Q13505 466 aa17.41■□□□□ 0.38
STRN3-201ENST00000355683 KAZALD1Q96I82 304 aa17.41■□□□□ 0.38
STRN3-201ENST00000355683 PFKFB1P16118 471 aa17.41■□□□□ 0.38
STRN3-201ENST00000355683 MYSM1Q5VVJ2 828 aa17.41■□□□□ 0.38
STRN3-201ENST00000355683 TAF3Q5VWG9 929 aa17.41■□□□□ 0.38
STRN3-201ENST00000355683 HAUS7Q99871 368 aa17.41■□□□□ 0.38
STRN3-201ENST00000355683 IFIT1BQ5T764 474 aaKnown RBP17.41■□□□□ 0.38
STRN3-201ENST00000355683 RRAGBQ5VZM2 374 aa17.41■□□□□ 0.38
STRN3-201ENST00000355683 CDK5RAP3Q96JB5 506 aa17.41■□□□□ 0.38
STRN3-201ENST00000355683 FANCCQ00597 558 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 NOM1Q5C9Z4 860 aaKnown RBP17.4■□□□□ 0.38
STRN3-201ENST00000355683 CAPZA3Q96KX2 299 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 CARD6Q9BX69 1037 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 TM6SF1Q9BZW5 370 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 GOLPH3LQ9H4A5 285 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 DEF6Q9H4E7 631 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.4■□□□□ 0.38
STRN3-201ENST00000355683 TECPR2O15040 1411 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 LMAN1P49257 510 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 PICALMQ13492 652 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 AATFQ9NY61 560 aaKnown RBP eCLIP17.4■□□□□ 0.38
STRN3-201ENST00000355683 ANGEL1Q9UNK9 670 aaKnown RBP17.4■□□□□ 0.38
STRN3-201ENST00000355683 ZBTB22O15209 634 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 CASQ1P31415 396 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 ARID5AQ03989 594 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 APPBP2Q92624 585 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 FANCLQ9NW38 375 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 PPP1R1BQ9UD71 204 aaPredicted RBP17.4■□□□□ 0.38
STRN3-201ENST00000355683 CD163L1Q9NR16 1453 aa17.4■□□□□ 0.38
STRN3-201ENST00000355683 NBPF26B4DH59 902 aa17.39■□□□□ 0.38
STRN3-201ENST00000355683 C6orf229H3BNL8 230 aa17.39■□□□□ 0.38
STRN3-201ENST00000355683 NBPF14Q5TI25 921 aa17.39■□□□□ 0.38
STRN3-201ENST00000355683 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.38
STRN3-201ENST00000355683 CATIPQ7Z7H3 387 aa17.39■□□□□ 0.38
STRN3-201ENST00000355683 NBPF15Q8N660 670 aa17.39■□□□□ 0.38
STRN3-201ENST00000355683 KRT18P05783 430 aaKnown RBP17.39■□□□□ 0.37
STRN3-201ENST00000355683 HEATR3Q7Z4Q2 680 aa17.39■□□□□ 0.37
STRN3-201ENST00000355683 KCNH3Q9ULD8 1083 aa17.39■□□□□ 0.37
STRN3-201ENST00000355683 DLC1Q96QB1 1528 aa17.39■□□□□ 0.37
STRN3-201ENST00000355683 HOXB7P09629 217 aa17.39■□□□□ 0.37
STRN3-201ENST00000355683 TXLNAP40222 546 aa17.39■□□□□ 0.37
STRN3-201ENST00000355683 AK7Q96M32 723 aa17.39■□□□□ 0.37
STRN3-201ENST00000355683 UBA5Q9GZZ9 404 aa17.39■□□□□ 0.37
STRN3-201ENST00000355683 COPRSQ9NQ92 184 aa17.39■□□□□ 0.37
STRN3-201ENST00000355683 MCM9Q9NXL9 1143 aa17.39■□□□□ 0.37
STRN3-201ENST00000355683 MAGEC2Q9UBF1 373 aaPredicted RBP17.39■□□□□ 0.37
STRN3-201ENST00000355683 TMX4Q9H1E5 349 aaPredicted RBP17.38■□□□□ 0.37
STRN3-201ENST00000355683 CWC15Q9P013 229 aaKnown RBP17.38■□□□□ 0.37
STRN3-201ENST00000355683 NFE2L3Q9Y4A8 694 aa17.38■□□□□ 0.37
STRN3-201ENST00000355683 BAZ2BQ9UIF8 2168 aaKnown RBP17.38■□□□□ 0.37
STRN3-201ENST00000355683 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
STRN3-201ENST00000355683 RAD51AP2Q09MP3 1159 aa17.38■□□□□ 0.37
STRN3-201ENST00000355683 RPAP1Q9BWH6 1393 aaPredicted RBP17.38■□□□□ 0.37
STRN3-201ENST00000355683 AOX1Q06278 1338 aa17.38■□□□□ 0.37
STRN3-201ENST00000355683 MED14O60244 1454 aa17.38■□□□□ 0.37
STRN3-201ENST00000355683 KIF24Q5T7B8 1368 aa17.38■□□□□ 0.37
STRN3-201ENST00000355683 SPTY2D1Q68D10 685 aaPredicted RBP17.38■□□□□ 0.37
STRN3-201ENST00000355683 SENP2Q9HC62 589 aa17.38■□□□□ 0.37
STRN3-201ENST00000355683 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
STRN3-201ENST00000355683 PTPROQ16827 1216 aa17.38■□□□□ 0.37
STRN3-201ENST00000355683 NAA16Q6N069 864 aaPredicted RBP17.38■□□□□ 0.37
STRN3-201ENST00000355683 KIAA1328Q86T90 577 aa17.38■□□□□ 0.37
STRN3-201ENST00000355683 KIAA1524Q8TCG1 905 aa17.38■□□□□ 0.37
STRN3-201ENST00000355683 SERTAD1Q9UHV2 236 aa17.38■□□□□ 0.37
STRN3-201ENST00000355683 CBFA2T2O43439 604 aa17.37■□□□□ 0.37
STRN3-201ENST00000355683 SETQ01105 290 aaPredicted RBP17.37■□□□□ 0.37
STRN3-201ENST00000355683 CCDC191Q8NCU4 936 aa17.37■□□□□ 0.37
STRN3-201ENST00000355683 FOXN1O15353 648 aa17.37■□□□□ 0.37
STRN3-201ENST00000355683 PIK3AP1Q6ZUJ8 805 aa17.37■□□□□ 0.37
STRN3-201ENST00000355683 KRT222Q8N1A0 295 aa17.37■□□□□ 0.37
STRN3-201ENST00000355683 IQGAP1P46940 1657 aa17.37■□□□□ 0.37
STRN3-201ENST00000355683 CCDC194A0A1B0GVG4 234 aa17.37■□□□□ 0.37
STRN3-201ENST00000355683 TCIRG1Q13488 830 aa17.37■□□□□ 0.37
STRN3-201ENST00000355683 CCDC178Q5BJE1 867 aa17.37■□□□□ 0.37
STRN3-201ENST00000355683 ACBD3Q9H3P7 528 aa17.37■□□□□ 0.37
STRN3-201ENST00000355683 HELLSQ9NRZ9 838 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms