RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 MROH7-TTC4A0A0A0MT08 1334 aa16.18■□□□□ 0.18
HOXA1-202ENST00000355633 COL9A3Q14050 684 aaPredicted RBP16.18■□□□□ 0.18
HOXA1-202ENST00000355633 SLF2Q8IX21 1173 aa16.18■□□□□ 0.18
HOXA1-202ENST00000355633 TMX3Q96JJ7 454 aa16.18■□□□□ 0.18
HOXA1-202ENST00000355633 NOL10Q9BSC4 688 aaKnown RBP16.18■□□□□ 0.18
HOXA1-202ENST00000355633 CRNKL1Q9BZJ0 848 aaKnown RBP16.18■□□□□ 0.18
HOXA1-202ENST00000355633 BAG3O95817 575 aa16.17■□□□□ 0.18
HOXA1-202ENST00000355633 CERS5Q8N5B7 392 aa16.17■□□□□ 0.18
HOXA1-202ENST00000355633 STRIP1Q5VSL9 837 aa16.16■□□□□ 0.18
HOXA1-202ENST00000355633 TCEANC2Q96MN5 208 aa16.16■□□□□ 0.18
HOXA1-202ENST00000355633 ALDH8A1Q9H2A2 487 aaPredicted RBP16.16■□□□□ 0.18
HOXA1-202ENST00000355633 SPON1Q9HCB6 807 aa16.16■□□□□ 0.18
HOXA1-202ENST00000355633 LIMCH1Q9UPQ0 1083 aa16.16■□□□□ 0.18
HOXA1-202ENST00000355633 SCN9AQ15858 1988 aa16.16■□□□□ 0.18
HOXA1-202ENST00000355633 PPP4CP60510 307 aa16.16■□□□□ 0.18
HOXA1-202ENST00000355633 ANKRD1Q15327 319 aa16.16■□□□□ 0.18
HOXA1-202ENST00000355633 GIMAP6Q6P9H5 292 aa16.16■□□□□ 0.18
HOXA1-202ENST00000355633 DHX32Q7L7V1 743 aaKnown RBP16.16■□□□□ 0.18
HOXA1-202ENST00000355633 FAM163AQ96GL9 167 aaPredicted RBP16.16■□□□□ 0.18
HOXA1-202ENST00000355633 NBPF3Q9H094 633 aa16.16■□□□□ 0.18
HOXA1-202ENST00000355633 KCNQ5Q9NR82 932 aa16.16■□□□□ 0.18
HOXA1-202ENST00000355633 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
HOXA1-202ENST00000355633 FKBP1AP62942 108 aaKnown RBP16.15■□□□□ 0.18
HOXA1-202ENST00000355633 ILDR2Q71H61 639 aa16.15■□□□□ 0.18
HOXA1-202ENST00000355633 CERS3Q8IU89 383 aa16.15■□□□□ 0.18
HOXA1-202ENST00000355633 TBC1D10CQ8IV04 446 aa16.15■□□□□ 0.18
HOXA1-202ENST00000355633 NCOA7Q8NI08 942 aa16.15■□□□□ 0.18
HOXA1-202ENST00000355633 MXD3Q9BW11 206 aa16.15■□□□□ 0.18
HOXA1-202ENST00000355633 VPS33BQ9H267 617 aa16.15■□□□□ 0.18
HOXA1-202ENST00000355633 TIAM2Q8IVF5 1701 aa16.14■□□□□ 0.17
HOXA1-202ENST00000355633 GPR75-ASB3A0A0A6YYF3 556 aa16.14■□□□□ 0.17
HOXA1-202ENST00000355633 USP17L3A6NCW0 530 aa16.14■□□□□ 0.17
HOXA1-202ENST00000355633 USP17L4A6NCW7 530 aa16.14■□□□□ 0.17
HOXA1-202ENST00000355633 F8W031 263 aaPredicted RBP16.14■□□□□ 0.17
HOXA1-202ENST00000355633 BTDP43251 543 aa16.14■□□□□ 0.17
HOXA1-202ENST00000355633 TRDNQ13061 729 aa16.14■□□□□ 0.17
HOXA1-202ENST00000355633 USP17L1Q7RTZ2 530 aa16.14■□□□□ 0.17
HOXA1-202ENST00000355633 RALYLQ86SE5 291 aaKnown RBP16.14■□□□□ 0.17
HOXA1-202ENST00000355633 LARP6Q9BRS8 491 aaKnown RBP16.14■□□□□ 0.17
HOXA1-202ENST00000355633 ZNF277Q9NRM2 450 aaPredicted RBP16.14■□□□□ 0.17
HOXA1-202ENST00000355633 ATP8A2Q9NTI2 1148 aa16.14■□□□□ 0.17
HOXA1-202ENST00000355633 TTF2Q9UNY4 1162 aaKnown RBP16.14■□□□□ 0.17
HOXA1-202ENST00000355633 ZNF646O15015 1829 aaPredicted RBP16.14■□□□□ 0.17
HOXA1-202ENST00000355633 BAZ2AQ9UIF9 1905 aaKnown RBP16.14■□□□□ 0.17
HOXA1-202ENST00000355633 GAKO14976 1311 aa16.14■□□□□ 0.17
HOXA1-202ENST00000355633 CUL4AQ13619 759 aa16.14■□□□□ 0.17
HOXA1-202ENST00000355633 TOB2Q14106 344 aaPredicted RBP16.14■□□□□ 0.17
HOXA1-202ENST00000355633 DACT2Q5SW24 774 aa16.14■□□□□ 0.17
HOXA1-202ENST00000355633 LARGE2Q8N3Y3 721 aa16.14■□□□□ 0.17
HOXA1-202ENST00000355633 SH3RF3Q8TEJ3 882 aaPredicted RBP16.14■□□□□ 0.17
HOXA1-202ENST00000355633 BCS1LQ9Y276 419 aa16.14■□□□□ 0.17
HOXA1-202ENST00000355633 FER1L6Q2WGJ9 1857 aa16.13■□□□□ 0.17
HOXA1-202ENST00000355633 EXOSC10Q01780 885 aaKnown RBP16.13■□□□□ 0.17
HOXA1-202ENST00000355633 CTDSPL2Q05D32 466 aa16.13■□□□□ 0.17
HOXA1-202ENST00000355633 Q6ZUG5 572 aa16.13■□□□□ 0.17
HOXA1-202ENST00000355633 ZSCAN31Q96LW9 406 aaPredicted RBP16.13■□□□□ 0.17
HOXA1-202ENST00000355633 DCP1AQ9NPI6 582 aaPredicted RBP16.13■□□□□ 0.17
HOXA1-202ENST00000355633 MINDY4BA8MYZ0 360 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 PLCG2P16885 1265 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 FGD1P98174 961 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 PPARAQ07869 468 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 MB21D2Q8IYB1 491 aaPredicted RBP16.12■□□□□ 0.17
HOXA1-202ENST00000355633 PSME4Q14997 1843 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 YDJCA8MPS7 323 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 MCM5P33992 734 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 USP5P45974 858 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 AKNAD1Q5T1N1 836 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 NLGN2Q8NFZ4 835 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 LRRC2Q9BYS8 371 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 TAOK3Q9H2K8 898 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 SH2B1Q9NRF2 756 aaPredicted RBP16.12■□□□□ 0.17
HOXA1-202ENST00000355633 ANAPC4Q9UJX5 808 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 DAGLAQ9Y4D2 1042 aa16.12■□□□□ 0.17
HOXA1-202ENST00000355633 IARSP41252 1262 aaKnown RBP16.11■□□□□ 0.17
HOXA1-202ENST00000355633 CTR9Q6PD62 1173 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 MFSD6Q6ZSS7 791 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 CHST3Q7LGC8 479 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 STAG1Q8WVM7 1258 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 CNNM2Q9H8M5 875 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 ARPP21Q9UBL0 812 aaPredicted RBP16.11■□□□□ 0.17
HOXA1-202ENST00000355633 TPCN1Q9ULQ1 816 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 NEDD4P46934 1319 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 LAMB1P07942 1786 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 USP17L12C9JPN9 530 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 USP17L21D6R901 530 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 LARGE1O95461 756 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 DDIT3P35638 169 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 SCNN1DP51172 638 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 TEKT1Q969V4 418 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 INTS4Q96HW7 963 aaKnown RBP16.11■□□□□ 0.17
HOXA1-202ENST00000355633 RNF41Q9H4P4 317 aaPredicted RBP16.11■□□□□ 0.17
HOXA1-202ENST00000355633 CHMP5Q9NZZ3 219 aa16.11■□□□□ 0.17
HOXA1-202ENST00000355633 WDR19Q8NEZ3 1342 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 CDK5RAP2Q96SN8 1893 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 B4E1Z4 1266 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 PRC1O43663 620 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 RHBDL3P58872 404 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 HHIPL2Q6UWX4 724 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 KIAA0825Q8IV33 1275 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 NIM1KQ8IY84 436 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms