RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 PNOCQ13519 176 aa8.97□□□□□ -0.97
CD46-203ENST00000354848 CPLX2Q6PUV4 134 aaKnown RBP8.97□□□□□ -0.97
CD46-203ENST00000354848 RAD9BQ6WBX8 426 aa8.97□□□□□ -0.97
CD46-203ENST00000354848 GNL3LQ9NVN8 582 aaKnown RBP8.97□□□□□ -0.97
CD46-203ENST00000354848 WASLO00401 505 aaPredicted RBP8.96□□□□□ -0.97
CD46-203ENST00000354848 GPTP24298 496 aa8.96□□□□□ -0.97
CD46-203ENST00000354848 PIP4K2BP78356 416 aa8.96□□□□□ -0.97
CD46-203ENST00000354848 SETQ01105 290 aaPredicted RBP8.96□□□□□ -0.97
CD46-203ENST00000354848 OTUD7BQ6GQQ9 843 aa8.96□□□□□ -0.97
CD46-203ENST00000354848 OLFM4Q6UX06 510 aa8.96□□□□□ -0.97
CD46-203ENST00000354848 STOX1Q6ZVD7 989 aa8.96□□□□□ -0.97
CD46-203ENST00000354848 STAG1Q8WVM7 1258 aa8.96□□□□□ -0.97
CD46-203ENST00000354848 TACO1Q9BSH4 297 aaKnown RBP8.96□□□□□ -0.97
CD46-203ENST00000354848 MYH8P13535 1937 aa8.96□□□□□ -0.97
CD46-203ENST00000354848 PI4KAP2A4QPH2 592 aa8.96□□□□□ -0.98
CD46-203ENST00000354848 SASH1O94885 1247 aa8.96□□□□□ -0.98
CD46-203ENST00000354848 FDPSP14324 419 aaKnown RBP8.96□□□□□ -0.98
CD46-203ENST00000354848 SYKP43405 635 aa8.96□□□□□ -0.98
CD46-203ENST00000354848 DDR1Q08345 913 aa8.96□□□□□ -0.98
CD46-203ENST00000354848 WHAMMP3Q1A5X7 153 aa8.96□□□□□ -0.98
CD46-203ENST00000354848 EGFL6Q8IUX8 553 aa8.96□□□□□ -0.98
CD46-203ENST00000354848 SLC35F6Q8N357 371 aa8.96□□□□□ -0.98
CD46-203ENST00000354848 PI4KAP1Q8N8J0 262 aa8.96□□□□□ -0.98
CD46-203ENST00000354848 GIMAP7Q8NHV1 300 aa8.96□□□□□ -0.98
CD46-203ENST00000354848 BCAS4Q8TDM0 211 aa8.96□□□□□ -0.98
CD46-203ENST00000354848 EDC3Q96F86 508 aaKnown RBP8.96□□□□□ -0.98
CD46-203ENST00000354848 CABS1Q96KC9 395 aa8.96□□□□□ -0.98
CD46-203ENST00000354848 CEP170BQ9Y4F5 1589 aaPredicted RBP8.95□□□□□ -0.98
CD46-203ENST00000354848 CDC27P30260 824 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 PDE4BQ07343 736 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 MYSM1Q5VVJ2 828 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 DHX32Q7L7V1 743 aaKnown RBP8.95□□□□□ -0.98
CD46-203ENST00000354848 CEP120Q8N960 986 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 NUDT16Q96DE0 195 aaKnown RBP8.95□□□□□ -0.98
CD46-203ENST00000354848 EHD4Q9H223 541 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 CAPN7Q9Y6W3 813 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 FMN2Q9NZ56 1722 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 SBNO1A3KN83 1393 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 GGCXP38435 758 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 CCDC129Q6ZRS4 1044 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 FAM76AQ8TAV0 307 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 RABEP2Q9H5N1 569 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 U3KPZ7 1027 aaPredicted RBP8.95□□□□□ -0.98
CD46-203ENST00000354848 RIMBP3CA6NJZ7 1639 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 RIMBP3BA6NNM3 1639 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 RIMBP3Q9UFD9 1639 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 MYO1FO00160 1098 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 PPP2R5AQ15172 486 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 COG1Q8WTW3 980 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 MIEF2Q96C03 454 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 CDC5LQ99459 802 aaKnown RBP8.95□□□□□ -0.98
CD46-203ENST00000354848 NAPGQ99747 312 aaPredicted RBP8.95□□□□□ -0.98
CD46-203ENST00000354848 AGXT2Q9BYV1 514 aa8.95□□□□□ -0.98
CD46-203ENST00000354848 AKR1B15C9JRZ8 316 aaPredicted RBP8.94□□□□□ -0.98
CD46-203ENST00000354848 PPP1R12AO14974 1030 aaPredicted RBP8.94□□□□□ -0.98
CD46-203ENST00000354848 CHGBP05060 677 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 BMP6P22004 513 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 ELF1P32519 619 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 FNTAP49354 379 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 AKAP17AQ02040 695 aaKnown RBP8.94□□□□□ -0.98
CD46-203ENST00000354848 STIM1Q13586 685 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 NEDD9Q14511 834 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 LRCH2Q5VUJ6 765 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 ANO1Q5XXA6 986 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 NCAPH2Q6IBW4 605 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.94□□□□□ -0.98
CD46-203ENST00000354848 PANX2Q96RD6 677 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 TEX13AQ9BXU3 409 aaPredicted RBP8.94□□□□□ -0.98
CD46-203ENST00000354848 NCAPD2Q15021 1401 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 GRIN2DO15399 1336 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 SHTN1A0MZ66 631 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 PATL2C9JE40 543 aaKnown RBP8.94□□□□□ -0.98
CD46-203ENST00000354848 AGPSO00116 658 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 ABL1P00519 1130 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 HMGB1P09429 215 aaKnown RBP8.94□□□□□ -0.98
CD46-203ENST00000354848 ZNF18P17022 549 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 EIF2S2P20042 333 aaKnown RBP8.94□□□□□ -0.98
CD46-203ENST00000354848 MARCKSP29966 332 aaPredicted RBP8.94□□□□□ -0.98
CD46-203ENST00000354848 PDIA3P30101 505 aaKnown RBP8.94□□□□□ -0.98
CD46-203ENST00000354848 SYNE3Q6ZMZ3 975 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 RASGRP2Q7LDG7 609 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 FOXP4Q8IVH2 680 aaPredicted RBP8.94□□□□□ -0.98
CD46-203ENST00000354848 CCDC148Q8NFR7 591 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 XAGE2Q96GT9 111 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 CD248Q9HCU0 757 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 MCM8Q9UJA3 840 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 HPSEQ9Y251 543 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 CCDC61Q9Y6R9 512 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 KDRP35968 1356 aa8.94□□□□□ -0.98
CD46-203ENST00000354848 GOLGA6CA6NDK9 693 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 EIF3HO15372 352 aaKnown RBP eCLIP8.93□□□□□ -0.98
CD46-203ENST00000354848 GOLGA6DP0CG33 693 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 PPFIA1Q13136 1202 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 MAP9Q49MG5 647 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 METTL16Q86W50 562 aaKnown RBP8.93□□□□□ -0.98
CD46-203ENST00000354848 ZKSCAN4Q969J2 545 aaPredicted RBP8.93□□□□□ -0.98
CD46-203ENST00000354848 GDAP1L1Q96MZ0 367 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 CAPS2Q9BXY5 557 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 GOLGA6AQ9NYA3 693 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 NFE2L3Q9Y4A8 694 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms