RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 TTF1Q15361 905 aaPredicted RBP22.68■■□□□ 1.22
COL13A1-201ENST00000354547 SH2B2O14492 632 aaPredicted RBP22.68■■□□□ 1.22
COL13A1-201ENST00000354547 MBD4O95243 580 aa22.68■■□□□ 1.22
COL13A1-201ENST00000354547 LMOD1P29536 600 aaPredicted RBP22.68■■□□□ 1.22
COL13A1-201ENST00000354547 AXDND1Q5T1B0 1012 aaPredicted RBP22.68■■□□□ 1.22
COL13A1-201ENST00000354547 VGLL2Q8N8G2 317 aa22.68■■□□□ 1.22
COL13A1-201ENST00000354547 XPO4Q9C0E2 1151 aaKnown RBP22.68■■□□□ 1.22
COL13A1-201ENST00000354547 IQSEC3Q9UPP2 1182 aaPredicted RBP22.68■■□□□ 1.22
COL13A1-201ENST00000354547 ZMYM6O95789 1325 aa22.67■■□□□ 1.22
COL13A1-201ENST00000354547 GOLGA8AA7E2F4 631 aa22.67■■□□□ 1.22
COL13A1-201ENST00000354547 ZBTB43O43298 467 aa22.67■■□□□ 1.22
COL13A1-201ENST00000354547 SPECC1Q5M775 1068 aa22.67■■□□□ 1.22
COL13A1-201ENST00000354547 CEP135Q66GS9 1140 aa22.67■■□□□ 1.22
COL13A1-201ENST00000354547 CMTR1Q8N1G2 835 aaKnown RBP22.67■■□□□ 1.22
COL13A1-201ENST00000354547 PTPN21Q16825 1174 aa22.67■■□□□ 1.22
COL13A1-201ENST00000354547 TMC6Q7Z403 805 aa22.67■■□□□ 1.22
COL13A1-201ENST00000354547 CCDC112Q8NEF3 446 aa22.67■■□□□ 1.22
COL13A1-201ENST00000354547 SLC26A6Q9BXS9 759 aa22.67■■□□□ 1.22
COL13A1-201ENST00000354547 NAPBQ9H115 298 aa22.67■■□□□ 1.22
COL13A1-201ENST00000354547 SEC31BQ9NQW1 1179 aa22.67■■□□□ 1.22
COL13A1-201ENST00000354547 PRKAB2O43741 272 aa22.66■■□□□ 1.22
COL13A1-201ENST00000354547 PDE8AO60658 829 aa22.66■■□□□ 1.22
COL13A1-201ENST00000354547 IARSP41252 1262 aaKnown RBP22.66■■□□□ 1.22
COL13A1-201ENST00000354547 UBN2Q6ZU65 1347 aa22.66■■□□□ 1.22
COL13A1-201ENST00000354547 IFIT3O14879 490 aaKnown RBP22.66■■□□□ 1.22
COL13A1-201ENST00000354547 CPLX2Q6PUV4 134 aaKnown RBP22.66■■□□□ 1.22
COL13A1-201ENST00000354547 STRBPQ96SI9 672 aaKnown RBP22.66■■□□□ 1.22
COL13A1-201ENST00000354547 CDHR2Q9BYE9 1310 aa22.66■■□□□ 1.22
COL13A1-201ENST00000354547 NBPF11Q86T75 865 aa22.66■■□□□ 1.22
COL13A1-201ENST00000354547 SPEF2Q9C093 1822 aa22.65■■□□□ 1.22
COL13A1-201ENST00000354547 MYO5AQ9Y4I1 1855 aaKnown RBP22.65■■□□□ 1.22
COL13A1-201ENST00000354547 SYKP43405 635 aa22.65■■□□□ 1.22
COL13A1-201ENST00000354547 UBE3CQ15386 1083 aa22.65■■□□□ 1.22
COL13A1-201ENST00000354547 ZSWIM5Q9P217 1185 aa22.65■■□□□ 1.22
COL13A1-201ENST00000354547 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.65■■□□□ 1.22
COL13A1-201ENST00000354547 V9GYY5 206 aaPredicted RBP22.65■■□□□ 1.22
COL13A1-201ENST00000354547 SMTNL1A8MU46 457 aa22.65■■□□□ 1.22
COL13A1-201ENST00000354547 CCZ1BP86790 482 aa22.65■■□□□ 1.22
COL13A1-201ENST00000354547 CCZ1P86791 482 aaPredicted RBP22.65■■□□□ 1.22
COL13A1-201ENST00000354547 TRIM29Q14134 588 aa22.65■■□□□ 1.22
COL13A1-201ENST00000354547 SLC39A14Q15043 492 aa22.65■■□□□ 1.22
COL13A1-201ENST00000354547 PTPN14Q15678 1187 aa22.65■■□□□ 1.22
COL13A1-201ENST00000354547 MIGA1Q8NAN2 632 aa22.65■■□□□ 1.22
COL13A1-201ENST00000354547 SPATA5Q8NB90 893 aa22.65■■□□□ 1.22
COL13A1-201ENST00000354547 RANBP6O60518 1105 aaKnown RBP22.64■■□□□ 1.22
COL13A1-201ENST00000354547 ATP2B1P20020 1258 aa22.64■■□□□ 1.22
COL13A1-201ENST00000354547 U2AF2P26368 475 aaKnown RBP eCLIP22.64■■□□□ 1.22
COL13A1-201ENST00000354547 MPHOSPH8Q99549 860 aa22.64■■□□□ 1.22
COL13A1-201ENST00000354547 EPB41L4AQ9HCS5 686 aaPredicted RBP22.64■■□□□ 1.22
COL13A1-201ENST00000354547 CMA1P23946 247 aa22.64■■□□□ 1.21
COL13A1-201ENST00000354547 PNOCQ13519 176 aa22.64■■□□□ 1.21
COL13A1-201ENST00000354547 RASGRF1Q13972 1273 aa22.64■■□□□ 1.21
COL13A1-201ENST00000354547 PUM3Q15397 648 aaKnown RBP22.64■■□□□ 1.21
COL13A1-201ENST00000354547 HSP90AA4PQ58FG1 418 aa22.64■■□□□ 1.21
COL13A1-201ENST00000354547 IGDCC4Q8TDY8 1250 aa22.64■■□□□ 1.21
COL13A1-201ENST00000354547 IFNL3Q8IZI9 196 aa22.63■■□□□ 1.21
COL13A1-201ENST00000354547 SLC12A7Q9Y666 1083 aa22.63■■□□□ 1.21
COL13A1-201ENST00000354547 TOGARAM1Q9Y4F4 1720 aa22.63■■□□□ 1.21
COL13A1-201ENST00000354547 CDKL5O76039 1030 aa22.63■■□□□ 1.21
COL13A1-201ENST00000354547 ATP1A3P13637 1013 aa22.63■■□□□ 1.21
COL13A1-201ENST00000354547 LPIN2Q92539 896 aa22.63■■□□□ 1.21
COL13A1-201ENST00000354547 TCRBV5S4A2TA0A5A2 114 aa22.63■■□□□ 1.21
COL13A1-201ENST00000354547 NLRP12P59046 1061 aa22.63■■□□□ 1.21
COL13A1-201ENST00000354547 SHC4Q6S5L8 630 aa22.63■■□□□ 1.21
COL13A1-201ENST00000354547 LY9Q9HBG7 655 aa22.63■■□□□ 1.21
COL13A1-201ENST00000354547 TACC3Q9Y6A5 838 aa22.63■■□□□ 1.21
COL13A1-201ENST00000354547 BCAMP50895 628 aa22.62■■□□□ 1.21
COL13A1-201ENST00000354547 NCBP1Q09161 790 aaKnown RBP22.62■■□□□ 1.21
COL13A1-201ENST00000354547 KCNJ14Q9UNX9 436 aa22.62■■□□□ 1.21
COL13A1-201ENST00000354547 CTIFO43310 598 aaKnown RBP22.62■■□□□ 1.21
COL13A1-201ENST00000354547 GUCY1A2P33402 732 aa22.62■■□□□ 1.21
COL13A1-201ENST00000354547 UQCRFS1P1P0C7P4 283 aa22.61■■□□□ 1.21
COL13A1-201ENST00000354547 TDO2P48775 406 aa22.61■■□□□ 1.21
COL13A1-201ENST00000354547 MAP3K12Q12852 859 aa22.61■■□□□ 1.21
COL13A1-201ENST00000354547 AKAP11Q9UKA4 1901 aa22.61■■□□□ 1.21
COL13A1-201ENST00000354547 NEMFO60524 1076 aa22.61■■□□□ 1.21
COL13A1-201ENST00000354547 SUSD4Q5VX71 490 aa22.61■■□□□ 1.21
COL13A1-201ENST00000354547 FAM217BQ9NTX9 383 aaPredicted RBP22.61■■□□□ 1.21
COL13A1-201ENST00000354547 PAPPAQ13219 1627 aa22.61■■□□□ 1.21
COL13A1-201ENST00000354547 ABCC12Q96J65 1359 aa22.61■■□□□ 1.21
COL13A1-201ENST00000354547 SLC5A1P13866 664 aa22.6■■□□□ 1.21
COL13A1-201ENST00000354547 ARID4AP29374 1257 aaPredicted RBP22.6■■□□□ 1.21
COL13A1-201ENST00000354547 RBM6P78332 1123 aaKnown RBP22.6■■□□□ 1.21
COL13A1-201ENST00000354547 NUP133Q8WUM0 1156 aa22.6■■□□□ 1.21
COL13A1-201ENST00000354547 ACSBG1Q96GR2 724 aa22.6■■□□□ 1.21
COL13A1-201ENST00000354547 SHANK3Q9BYB0 1731 aa22.6■■□□□ 1.21
COL13A1-201ENST00000354547 NPHP1O15259 732 aa22.6■■□□□ 1.21
COL13A1-201ENST00000354547 PAXBP1Q9Y5B6 917 aa22.6■■□□□ 1.21
COL13A1-201ENST00000354547 PATL2C9JE40 543 aaKnown RBP22.6■■□□□ 1.21
COL13A1-201ENST00000354547 TPM4P67936 248 aa22.6■■□□□ 1.21
COL13A1-201ENST00000354547 SSRP1Q08945 709 aaKnown RBP22.6■■□□□ 1.21
COL13A1-201ENST00000354547 NTRK3Q16288 839 aa22.6■■□□□ 1.21
COL13A1-201ENST00000354547 TMEM87BQ96K49 555 aa22.6■■□□□ 1.21
COL13A1-201ENST00000354547 SLC4A4Q9Y6R1 1079 aa22.6■■□□□ 1.21
COL13A1-201ENST00000354547 BTBD18B2RXH4 712 aa22.59■■□□□ 1.21
COL13A1-201ENST00000354547 EXOC5O00471 708 aa22.59■■□□□ 1.21
COL13A1-201ENST00000354547 MFSD6Q6ZSS7 791 aa22.59■■□□□ 1.21
COL13A1-201ENST00000354547 CCAR2Q8N163 923 aaKnown RBP22.59■■□□□ 1.21
COL13A1-201ENST00000354547 LCORLQ8N3X6 602 aa22.59■■□□□ 1.21
COL13A1-201ENST00000354547 WDR19Q8NEZ3 1342 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms