RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 U3KPZ7 1027 aaPredicted RBP16.35■□□□□ 0.21
RLIM-202ENST00000349225 RIN2Q8WYP3 895 aaPredicted RBP16.34■□□□□ 0.21
RLIM-202ENST00000349225 CXorf56Q9H5V9 222 aa16.34■□□□□ 0.21
RLIM-202ENST00000349225 LGR6Q9HBX8 967 aa16.34■□□□□ 0.21
RLIM-202ENST00000349225 RNF40O75150 1001 aa16.34■□□□□ 0.21
RLIM-202ENST00000349225 FMR1Q06787 632 aaKnown RBP eCLIP16.34■□□□□ 0.21
RLIM-202ENST00000349225 MICALL1Q8N3F8 863 aa16.34■□□□□ 0.21
RLIM-202ENST00000349225 C19orf44Q9H6X5 657 aa16.34■□□□□ 0.21
RLIM-202ENST00000349225 HPSEQ9Y251 543 aa16.34■□□□□ 0.21
RLIM-202ENST00000349225 G3BP1Q13283 466 aaKnown RBP eCLIP16.33■□□□□ 0.21
RLIM-202ENST00000349225 ADGRG1Q9Y653 693 aa16.33■□□□□ 0.2
RLIM-202ENST00000349225 MRC1P22897 1456 aa16.33■□□□□ 0.2
RLIM-202ENST00000349225 EIF3JO75822 258 aaKnown RBP16.33■□□□□ 0.2
RLIM-202ENST00000349225 ZNF18P17022 549 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 SPECC1LQ69YQ0 1117 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 EHD4Q9H223 541 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 BABAM1Q9NWV8 329 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 KDM3BQ7LBC6 1761 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 FBXW10Q5XX13 1052 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 ANO1Q5XXA6 986 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 USHBP1Q8N6Y0 703 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.32■□□□□ 0.2
RLIM-202ENST00000349225 PALLDQ8WX93 1383 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 PRAMEF22A3QJZ6 481 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 SYKP43405 635 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 LIG3P49916 1009 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 RAB11FIP4Q86YS3 637 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 CEP89Q96ST8 783 aa16.32■□□□□ 0.2
RLIM-202ENST00000349225 CEMIPQ8WUJ3 1361 aa16.31■□□□□ 0.2
RLIM-202ENST00000349225 A0A087WUV0 522 aaPredicted RBP16.31■□□□□ 0.2
RLIM-202ENST00000349225 E7EWF7 191 aa16.31■□□□□ 0.2
RLIM-202ENST00000349225 LONRF3Q496Y0 759 aa16.31■□□□□ 0.2
RLIM-202ENST00000349225 MCMDC2Q4G0Z9 681 aa16.31■□□□□ 0.2
RLIM-202ENST00000349225 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
RLIM-202ENST00000349225 CDC5LQ99459 802 aaKnown RBP16.31■□□□□ 0.2
RLIM-202ENST00000349225 PCDHA5Q9Y5H7 936 aa16.31■□□□□ 0.2
RLIM-202ENST00000349225 AMPHP49418 695 aa16.31■□□□□ 0.2
RLIM-202ENST00000349225 FAM69CQ0P6D2 419 aa16.31■□□□□ 0.2
RLIM-202ENST00000349225 EPHA10Q5JZY3 1008 aa16.31■□□□□ 0.2
RLIM-202ENST00000349225 TRMT44Q8IYL2 757 aaKnown RBP16.31■□□□□ 0.2
RLIM-202ENST00000349225 CEP112Q8N8E3 955 aa16.31■□□□□ 0.2
RLIM-202ENST00000349225 ROBO2Q9HCK4 1378 aa16.31■□□□□ 0.2
RLIM-202ENST00000349225 CCDC172P0C7W6 258 aa16.31■□□□□ 0.2
RLIM-202ENST00000349225 DNAJC21Q5F1R6 531 aaKnown RBP16.31■□□□□ 0.2
RLIM-202ENST00000349225 ZNF569Q5MCW4 686 aa16.31■□□□□ 0.2
RLIM-202ENST00000349225 HNRNPH1P31943 449 aaKnown RBP16.3■□□□□ 0.2
RLIM-202ENST00000349225 ZNF274Q96GC6 653 aaPredicted RBP16.3■□□□□ 0.2
RLIM-202ENST00000349225 ERLIN1O75477 346 aa16.3■□□□□ 0.2
RLIM-202ENST00000349225 CCDC175P0C221 793 aa16.3■□□□□ 0.2
RLIM-202ENST00000349225 SLC35F6Q8N357 371 aa16.3■□□□□ 0.2
RLIM-202ENST00000349225 GRM8O00222 908 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 TEX33O43247 280 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 ATP5JP18859 108 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 KIF23Q02241 960 aaPredicted RBP16.29■□□□□ 0.2
RLIM-202ENST00000349225 CCDC91Q7Z6B0 441 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 IGSF22Q8N9C0 903 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 C8orf76Q96K31 380 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 SAMSN1Q9NSI8 373 aaKnown RBP16.29■□□□□ 0.2
RLIM-202ENST00000349225 CEP83Q9Y592 693 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 PLEKHG3A1L390 1219 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 AARSP49588 968 aaKnown RBP eCLIP16.29■□□□□ 0.2
RLIM-202ENST00000349225 ZNF827Q17R98 1081 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 AIFM3Q96NN9 605 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 CDHR2Q9BYE9 1310 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 SLC39A14Q15043 492 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 TTLL5Q6EMB2 1281 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 NCAPH2Q6IBW4 605 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 AFAP1L1Q8TED9 768 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 MED4Q9NPJ6 270 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 HPS5Q9UPZ3 1129 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 NFE2L3Q9Y4A8 694 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 TECPR2O15040 1411 aa16.29■□□□□ 0.2
RLIM-202ENST00000349225 ZNF142P52746 1687 aaPredicted RBP16.29■□□□□ 0.2
RLIM-202ENST00000349225 MDM2Q00987 491 aaPredicted RBP16.28■□□□□ 0.2
RLIM-202ENST00000349225 HSP90B2PQ58FF3 399 aa16.28■□□□□ 0.2
RLIM-202ENST00000349225 POTEB2H3BUK9 544 aa16.28■□□□□ 0.2
RLIM-202ENST00000349225 UTYO14607 1347 aa16.28■□□□□ 0.2
RLIM-202ENST00000349225 HMGB1P09429 215 aaKnown RBP16.28■□□□□ 0.2
RLIM-202ENST00000349225 PTPAQ15257 358 aa16.28■□□□□ 0.2
RLIM-202ENST00000349225 APTXQ7Z2E3 356 aaKnown RBP16.28■□□□□ 0.2
RLIM-202ENST00000349225 ARHGEF25Q86VW2 580 aa16.28■□□□□ 0.2
RLIM-202ENST00000349225 GDAP1L1Q96MZ0 367 aa16.28■□□□□ 0.2
RLIM-202ENST00000349225 ERLIN2O94905 339 aa16.28■□□□□ 0.2
RLIM-202ENST00000349225 NR1I3Q14994 352 aa16.28■□□□□ 0.2
RLIM-202ENST00000349225 RABEP2Q9H5N1 569 aa16.28■□□□□ 0.2
RLIM-202ENST00000349225 HPCAL4Q9UM19 191 aa16.28■□□□□ 0.2
RLIM-202ENST00000349225 FER1L4A9Z1Z3 1794 aa16.27■□□□□ 0.2
RLIM-202ENST00000349225 AGPSO00116 658 aa16.27■□□□□ 0.2
RLIM-202ENST00000349225 SHOX2O60902 331 aaPredicted RBP16.27■□□□□ 0.2
RLIM-202ENST00000349225 CCT5P48643 541 aa16.27■□□□□ 0.2
RLIM-202ENST00000349225 KIF4BQ2VIQ3 1234 aa16.27■□□□□ 0.2
RLIM-202ENST00000349225 KSR2Q6VAB6 950 aa16.27■□□□□ 0.2
RLIM-202ENST00000349225 LTV1Q96GA3 475 aaPredicted RBP16.27■□□□□ 0.2
RLIM-202ENST00000349225 KAT14Q9H8E8 782 aa16.27■□□□□ 0.2
RLIM-202ENST00000349225 SEC31BQ9NQW1 1179 aa16.27■□□□□ 0.2
RLIM-202ENST00000349225 ACRBPQ8NEB7 543 aa16.27■□□□□ 0.19
RLIM-202ENST00000349225 DBNDD2Q9BQY9 259 aa16.27■□□□□ 0.19
RLIM-202ENST00000349225 DONSONQ9NYP3 566 aa16.27■□□□□ 0.19
RLIM-202ENST00000349225 EIF5P55010 431 aaKnown RBP16.27■□□□□ 0.19
RLIM-202ENST00000349225 RBL2Q08999 1139 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms