RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 ZNF772Q68DY9 489 aaPredicted RBP17.43■□□□□ 0.38
PTPRO-202ENST00000348962 NSMFQ6X4W1 530 aa17.43■□□□□ 0.38
PTPRO-202ENST00000348962 CPXCR1Q8N123 301 aa17.43■□□□□ 0.38
PTPRO-202ENST00000348962 NEK11Q8NG66 645 aa17.43■□□□□ 0.38
PTPRO-202ENST00000348962 SUCLG2Q96I99 432 aa17.43■□□□□ 0.38
PTPRO-202ENST00000348962 IBTKQ9P2D0 1353 aaPredicted RBP17.43■□□□□ 0.38
PTPRO-202ENST00000348962 TCP10Q12799 353 aa17.43■□□□□ 0.38
PTPRO-202ENST00000348962 HSP90AA4PQ58FG1 418 aa17.43■□□□□ 0.38
PTPRO-202ENST00000348962 PLCD4Q9BRC7 762 aa17.43■□□□□ 0.38
PTPRO-202ENST00000348962 USP19O94966 1318 aa17.43■□□□□ 0.38
PTPRO-202ENST00000348962 PER1O15534 1290 aaPredicted RBP17.43■□□□□ 0.38
PTPRO-202ENST00000348962 ANO6Q4KMQ2 910 aa17.43■□□□□ 0.38
PTPRO-202ENST00000348962 INTS4Q96HW7 963 aaKnown RBP17.43■□□□□ 0.38
PTPRO-202ENST00000348962 STK24Q9Y6E0 443 aa17.43■□□□□ 0.38
PTPRO-202ENST00000348962 CCT6AP40227 531 aaKnown RBP17.42■□□□□ 0.38
PTPRO-202ENST00000348962 AKNAD1Q5T1N1 836 aa17.42■□□□□ 0.38
PTPRO-202ENST00000348962 LZTS2Q9BRK4 669 aa17.42■□□□□ 0.38
PTPRO-202ENST00000348962 INCENPQ9NQS7 918 aa17.42■□□□□ 0.38
PTPRO-202ENST00000348962 FRMD4BQ9Y2L6 1034 aa17.42■□□□□ 0.38
PTPRO-202ENST00000348962 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
PTPRO-202ENST00000348962 TACC1O75410 805 aa17.42■□□□□ 0.38
PTPRO-202ENST00000348962 EEF2P13639 858 aaKnown RBP17.42■□□□□ 0.38
PTPRO-202ENST00000348962 SLC8A3P57103 927 aa17.42■□□□□ 0.38
PTPRO-202ENST00000348962 CKAP4Q07065 602 aaKnown RBP17.42■□□□□ 0.38
PTPRO-202ENST00000348962 PHKG2P15735 406 aa17.42■□□□□ 0.38
PTPRO-202ENST00000348962 GTF2IP78347 998 aa17.42■□□□□ 0.38
PTPRO-202ENST00000348962 AZI2Q9H6S1 392 aa17.42■□□□□ 0.38
PTPRO-202ENST00000348962 MFSD14BQ5SR56 506 aa17.42■□□□□ 0.38
PTPRO-202ENST00000348962 CCDC42Q96M95 316 aa17.42■□□□□ 0.38
PTPRO-202ENST00000348962 BIRC3Q13489 604 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 SLC5A4Q9NY91 659 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 V9GY48 417 aaPredicted RBP17.41■□□□□ 0.38
PTPRO-202ENST00000348962 CTTNBP2Q8WZ74 1663 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 VWA3AA6NCI4 1184 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 MYCLP12524 364 aaPredicted RBP17.41■□□□□ 0.38
PTPRO-202ENST00000348962 FERP16591 822 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 KRT83P78385 493 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 MSL1Q68DK7 614 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 MAPKAPK5Q8IW41 473 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 TTF2Q9UNY4 1162 aaKnown RBP17.41■□□□□ 0.38
PTPRO-202ENST00000348962 ATP2B4P23634 1241 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 ARID5AQ03989 594 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 SREK1Q8WXA9 508 aaKnown RBP17.41■□□□□ 0.38
PTPRO-202ENST00000348962 AOX1Q06278 1338 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 ERBB4Q15303 1308 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 ATP2A1O14983 1001 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 ZNF174Q15697 407 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 C2CD5Q86YS7 1000 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 AS3MTQ9HBK9 375 aa17.41■□□□□ 0.38
PTPRO-202ENST00000348962 WDR44Q5JSH3 913 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 DCAF15Q66K64 600 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 AOPEPQ8N6M6 819 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 PLCB3Q01970 1234 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 FAM196AQ6ZSG2 479 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 PPP1R14CQ8TAE6 165 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 GINS2Q9Y248 185 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 ZFYVE16Q7Z3T8 1539 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 CCDC169A6NNP5 214 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 CHMP2AO43633 222 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 CCDC175P0C221 793 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 KIF5AQ12840 1032 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 PLIN2Q99541 437 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 SPC25Q9HBM1 224 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 RASAL2Q9UJF2 1139 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 USP40Q9NVE5 1235 aa17.4■□□□□ 0.38
PTPRO-202ENST00000348962 ARHGEF35A5YM69 484 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 HARSP12081 509 aaKnown RBP17.39■□□□□ 0.37
PTPRO-202ENST00000348962 CCDC129Q6ZRS4 1044 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 CHURC1Q8WUH1 139 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 CTSWP56202 376 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 TGFBRAP1Q8WUH2 860 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 EXOC7Q9UPT5 735 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 PTGS1P23219 599 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 RPS6KB1P23443 525 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 RXRBP28702 533 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 STRN3Q13033 797 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 ZSCAN23Q3MJ62 389 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 ARHGAP27Q6ZUM4 889 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 MAATS1Q7Z4T9 603 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 CCDC155Q8N6L0 562 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 CCDC77Q9BR77 488 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 KRT25Q7Z3Z0 450 aa17.39■□□□□ 0.37
PTPRO-202ENST00000348962 MAST1Q9Y2H9 1570 aa17.38■□□□□ 0.37
PTPRO-202ENST00000348962 KRT86O43790 486 aa17.38■□□□□ 0.37
PTPRO-202ENST00000348962 GJC1P36383 396 aa17.38■□□□□ 0.37
PTPRO-202ENST00000348962 DNAJC25Q9H1X3 360 aa17.38■□□□□ 0.37
PTPRO-202ENST00000348962 TRAF5O00463 557 aa17.38■□□□□ 0.37
PTPRO-202ENST00000348962 ADCY7P51828 1080 aa17.38■□□□□ 0.37
PTPRO-202ENST00000348962 MRPS9P82933 396 aaKnown RBP17.38■□□□□ 0.37
PTPRO-202ENST00000348962 NONOQ15233 471 aaKnown RBP eCLIP17.38■□□□□ 0.37
PTPRO-202ENST00000348962 TRIM6Q9C030 488 aaPredicted RBP17.38■□□□□ 0.37
PTPRO-202ENST00000348962 LOC102724428A0A0B4J2F2 783 aa17.38■□□□□ 0.37
PTPRO-202ENST00000348962 GIGYF1O75420 1035 aaPredicted RBP17.38■□□□□ 0.37
PTPRO-202ENST00000348962 EPB41P11171 864 aaKnown RBP17.38■□□□□ 0.37
PTPRO-202ENST00000348962 DNM2P50570 870 aa17.38■□□□□ 0.37
PTPRO-202ENST00000348962 STX17P56962 302 aa17.38■□□□□ 0.37
PTPRO-202ENST00000348962 SIK1P57059 783 aa17.38■□□□□ 0.37
PTPRO-202ENST00000348962 ZAP70P43403 619 aa17.38■□□□□ 0.37
PTPRO-202ENST00000348962 DISP1Q96F81 1524 aa17.38■□□□□ 0.37
PTPRO-202ENST00000348962 ZNF532Q9HCE3 1301 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms