RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 ZGPATQ8N5A5 531 aaKnown RBP13.24□□□□□ -0.29
TRAF3-201ENST00000347662 PTPRKQ15262 1439 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 BACH1O14867 736 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 RHPN1Q8TCX5 695 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 NSMCE1Q8WV22 266 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 PHACTR3Q96KR7 559 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 C6orf50Q9HD87 102 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 SAMD15Q9P1V8 674 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 GINS2Q9Y248 185 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 ESPNB1AK53 854 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 PYM1Q9BRP8 204 aaKnown RBP13.23□□□□□ -0.29
TRAF3-201ENST00000347662 ANO3Q9BYT9 981 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 HMGB1P09429 215 aaKnown RBP13.23□□□□□ -0.29
TRAF3-201ENST00000347662 KCNA4P22459 653 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 CNGA1P29973 690 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 MCM7P33993 719 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 LACTBP83111 547 aaPredicted RBP13.23□□□□□ -0.29
TRAF3-201ENST00000347662 TSTA3Q13630 321 aaPredicted RBP13.23□□□□□ -0.29
TRAF3-201ENST00000347662 KANK3Q6NY19 840 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 RMND1Q9NWS8 449 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 HGSO14964 777 aaPredicted RBP13.23□□□□□ -0.29
TRAF3-201ENST00000347662 VIMP08670 466 aaKnown RBP13.23□□□□□ -0.29
TRAF3-201ENST00000347662 MAN1A1P33908 653 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 LMBR1Q8WVP7 490 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 SCAND2PQ9GZW5 306 aaPredicted RBP13.23□□□□□ -0.29
TRAF3-201ENST00000347662 TFIP11Q9UBB9 837 aaKnown RBP13.23□□□□□ -0.29
TRAF3-201ENST00000347662 TCEANC2Q96MN5 208 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 ESYT2A0FGR8 921 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 PCK1P35558 622 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 IARSP41252 1262 aaKnown RBP13.23□□□□□ -0.29
TRAF3-201ENST00000347662 METAP2P50579 478 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRAF3-201ENST00000347662 ZNF131P52739 623 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 PPFIA1Q13136 1202 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 CXorf38Q8TB03 319 aa13.23□□□□□ -0.29
TRAF3-201ENST00000347662 ARHGEF2Q92974 986 aaKnown RBP13.23□□□□□ -0.29
TRAF3-201ENST00000347662 PBRM1Q86U86 1689 aa13.22□□□□□ -0.29
TRAF3-201ENST00000347662 RNMTO43148 476 aaKnown RBP13.22□□□□□ -0.29
TRAF3-201ENST00000347662 MAFGO15525 162 aa13.22□□□□□ -0.29
TRAF3-201ENST00000347662 STK10O94804 968 aaKnown RBP13.22□□□□□ -0.29
TRAF3-201ENST00000347662 CASC4Q6P4E1 433 aa13.22□□□□□ -0.29
TRAF3-201ENST00000347662 ATP10AO60312 1499 aa13.22□□□□□ -0.29
TRAF3-201ENST00000347662 RSRC1Q96IZ7 334 aaKnown RBP13.22□□□□□ -0.29
TRAF3-201ENST00000347662 GABPB2Q8TAK5 448 aaPredicted RBP13.22□□□□□ -0.29
TRAF3-201ENST00000347662 PRKG1Q13976 671 aa13.22□□□□□ -0.29
TRAF3-201ENST00000347662 IFIT1BQ5T764 474 aaKnown RBP13.22□□□□□ -0.29
TRAF3-201ENST00000347662 CCDC125Q86Z20 511 aa13.22□□□□□ -0.29
TRAF3-201ENST00000347662 CACNA2D3Q8IZS8 1091 aa13.22□□□□□ -0.29
TRAF3-201ENST00000347662 A1BGP04217 495 aa13.21□□□□□ -0.29
TRAF3-201ENST00000347662 UBASH3AP57075 661 aa13.21□□□□□ -0.29
TRAF3-201ENST00000347662 YTHDC2Q9H6S0 1430 aaKnown RBP13.21□□□□□ -0.29
TRAF3-201ENST00000347662 SBNO2Q9Y2G9 1366 aa13.21□□□□□ -0.29
TRAF3-201ENST00000347662 SPDYE3A6NKU9 549 aa13.21□□□□□ -0.29
TRAF3-201ENST00000347662 TSPYL2Q9H2G4 693 aaPredicted RBP13.21□□□□□ -0.29
TRAF3-201ENST00000347662 CETN3O15182 167 aa13.21□□□□□ -0.29
TRAF3-201ENST00000347662 HVCN1Q96D96 273 aa13.21□□□□□ -0.29
TRAF3-201ENST00000347662 MCM9Q9NXL9 1143 aa13.21□□□□□ -0.29
TRAF3-201ENST00000347662 LUC7L2Q9Y383 392 aaKnown RBP13.21□□□□□ -0.29
TRAF3-201ENST00000347662 STX10O60499 249 aa13.21□□□□□ -0.3
TRAF3-201ENST00000347662 ABL1P00519 1130 aa13.21□□□□□ -0.3
TRAF3-201ENST00000347662 GPR162Q16538 588 aa13.21□□□□□ -0.3
TRAF3-201ENST00000347662 NCOA7Q8NI08 942 aa13.21□□□□□ -0.3
TRAF3-201ENST00000347662 SUDS3Q9H7L9 328 aaPredicted RBP13.21□□□□□ -0.3
TRAF3-201ENST00000347662 HAUS2Q9NVX0 235 aa13.21□□□□□ -0.3
TRAF3-201ENST00000347662 USP25Q9UHP3 1055 aa13.21□□□□□ -0.3
TRAF3-201ENST00000347662 A0A1W2PP64 1363 aa13.21□□□□□ -0.3
TRAF3-201ENST00000347662 PKD2L1Q9P0L9 805 aa13.21□□□□□ -0.3
TRAF3-201ENST00000347662 MAP3K5Q99683 1374 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 WTAPQ15007 396 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 RPS6KA2Q15349 733 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 FYB2Q5VWT5 728 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 SRGAP1Q7Z6B7 1085 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 SKA2Q8WVK7 121 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-201ENST00000347662 MRPL46Q9H2W6 279 aaKnown RBP13.2□□□□□ -0.3
TRAF3-201ENST00000347662 TRPM2O94759 1503 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 A0A1B0GUL7 405 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 DCAF17Q5H9S7 520 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-201ENST00000347662 CCDC122Q5T0U0 273 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 MAGEB6Q8N7X4 407 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 XAB2Q9HCS7 855 aaKnown RBP13.2□□□□□ -0.3
TRAF3-201ENST00000347662 MTRF1LQ9UGC7 380 aaKnown RBP13.2□□□□□ -0.3
TRAF3-201ENST00000347662 ASXL1Q8IXJ9 1541 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 BAG6P46379 1132 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 ASIC1P78348 528 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 MUM1L1Q5H9M0 696 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 FAM200AQ8TCP9 573 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 IL15P40933 162 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-201ENST00000347662 LEO1Q8WVC0 666 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-201ENST00000347662 NEK1Q96PY6 1258 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 CTAGE9A4FU28 777 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 UFL1O94874 794 aa13.2□□□□□ -0.3
TRAF3-201ENST00000347662 ORC3Q9UBD5 711 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-201ENST00000347662 CTAGE15A4D2H0 777 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 CTAGE8P0CG41 777 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 IL1RL1Q01638 556 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 CTAGE4Q8IX94 777 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 VCXQ9H320 206 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 GBP1P32455 592 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 CALCOCO2Q13137 446 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 RBBP5Q15291 538 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms