RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 GNAI2P04899 355 aa6.28□□□□□ -1.4
VCAM1-202ENST00000347652 UBTFL1P0CB47 393 aaPredicted RBP6.28□□□□□ -1.4
VCAM1-202ENST00000347652 HCLS1P14317 486 aaPredicted RBP6.28□□□□□ -1.4
VCAM1-202ENST00000347652 C2CD5Q86YS7 1000 aa6.28□□□□□ -1.4
VCAM1-202ENST00000347652 WDR75Q8IWA0 830 aaKnown RBP6.28□□□□□ -1.4
VCAM1-202ENST00000347652 KAZALD1Q96I82 304 aa6.28□□□□□ -1.4
VCAM1-202ENST00000347652 SUCLG2Q96I99 432 aa6.28□□□□□ -1.4
VCAM1-202ENST00000347652 TSPYL2Q9H2G4 693 aaPredicted RBP6.28□□□□□ -1.4
VCAM1-202ENST00000347652 BCS1LQ9Y276 419 aa6.28□□□□□ -1.4
VCAM1-202ENST00000347652 TAF1P21675 1872 aa6.28□□□□□ -1.4
VCAM1-202ENST00000347652 CDHR2Q9BYE9 1310 aa6.28□□□□□ -1.4
VCAM1-202ENST00000347652 SYCP2LQ5T4T6 812 aa6.28□□□□□ -1.4
VCAM1-202ENST00000347652 OLFM4Q6UX06 510 aa6.28□□□□□ -1.4
VCAM1-202ENST00000347652 UBE3BQ7Z3V4 1068 aa6.28□□□□□ -1.4
VCAM1-202ENST00000347652 FAM89AQ96GI7 184 aa6.28□□□□□ -1.4
VCAM1-202ENST00000347652 NYXQ9GZU5 481 aa6.28□□□□□ -1.4
VCAM1-202ENST00000347652 TGFB2P61812 414 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 SLC10A5Q5PT55 438 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 RNF187Q5TA31 235 aaPredicted RBP6.27□□□□□ -1.41
VCAM1-202ENST00000347652 TPTE2Q6XPS3 522 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 AMOTL1Q8IY63 956 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 BRIP1Q9BX63 1249 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 PLA2G12BQ9BX93 195 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 HDAC5Q9UQL6 1122 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 LRRFIP2Q9Y608 721 aaKnown RBP6.27□□□□□ -1.41
VCAM1-202ENST00000347652 DLEC1Q9Y238 1755 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 SLX4Q8IY92 1834 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 SH3TC1Q8TE82 1336 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 LAMB2P55268 1798 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 PRC1O43663 620 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 P4HBP07237 508 aaKnown RBP6.27□□□□□ -1.41
VCAM1-202ENST00000347652 GTF2E1P29083 439 aaPredicted RBP6.27□□□□□ -1.41
VCAM1-202ENST00000347652 ST5P78524 1137 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 FOXO4P98177 505 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 EPHA10Q5JZY3 1008 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 ZNF622Q969S3 477 aaKnown RBP eCLIP6.27□□□□□ -1.41
VCAM1-202ENST00000347652 CCSER2Q9H7U1 834 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 NDUFB9Q9Y6M9 179 aa6.27□□□□□ -1.41
VCAM1-202ENST00000347652 DDX60Q8IY21 1712 aaKnown RBP6.27□□□□□ -1.41
VCAM1-202ENST00000347652 IRS4O14654 1257 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-202ENST00000347652 SRGNP10124 158 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 ATP8B2P98198 1209 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 DHX8Q14562 1220 aaKnown RBP6.26□□□□□ -1.41
VCAM1-202ENST00000347652 ECM1Q16610 540 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 RABL6Q3YEC7 729 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-202ENST00000347652 TTC39BQ5VTQ0 682 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-202ENST00000347652 CEP85Q6P2H3 762 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 SIRT2Q8IXJ6 389 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 RPAP2Q8IXW5 612 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-202ENST00000347652 ANKRD44Q8N8A2 993 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 IPO4Q8TEX9 1081 aaKnown RBP6.26□□□□□ -1.41
VCAM1-202ENST00000347652 SLC39A13Q96H72 371 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 FAM126AQ9BYI3 521 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-202ENST00000347652 BICC1Q9H694 974 aaKnown RBP6.26□□□□□ -1.41
VCAM1-202ENST00000347652 PDE8AO60658 829 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 LDHAP00338 332 aaKnown RBP6.26□□□□□ -1.41
VCAM1-202ENST00000347652 CSF1RP07333 972 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 MTX1Q13505 466 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 ZNF394Q53GI3 561 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 CCDC85AQ96PX6 553 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-202ENST00000347652 ARHGEF10LQ9HCE6 1279 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 PPP4R2Q9NY27 417 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 PIM2Q9P1W9 311 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 H0YIN7 160 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 PDGFRBP09619 1106 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 ATP2B4P23634 1241 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 PRELPP51888 382 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 NPDC1Q9NQX5 325 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-202ENST00000347652 TCEAL9Q9UHQ7 104 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 RIC1Q4ADV7 1423 aa6.26□□□□□ -1.41
VCAM1-202ENST00000347652 KLRG2A4D1S0 409 aaPredicted RBP6.25□□□□□ -1.41
VCAM1-202ENST00000347652 C21orf2O43822 256 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 HSD3B2P26439 372 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 CTSWP56202 376 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 LRRC41Q15345 812 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 DALRD3Q5D0E6 543 aaKnown RBP6.25□□□□□ -1.41
VCAM1-202ENST00000347652 USP48Q86UV5 1035 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 CTDP1Q9Y5B0 961 aaPredicted RBP6.25□□□□□ -1.41
VCAM1-202ENST00000347652 ARFGEF1Q9Y6D6 1849 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 PNMA6EA0A0J9YXQ4 647 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 RASSF7Q02833 373 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 RBL2Q08999 1139 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 HDAC1Q13547 482 aaPredicted RBP6.25□□□□□ -1.41
VCAM1-202ENST00000347652 CRY2Q49AN0 593 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 ZNF280DQ6N043 979 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 PRPF40BQ6NWY9 871 aaKnown RBP6.25□□□□□ -1.41
VCAM1-202ENST00000347652 LMBR1LQ6UX01 489 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 CAPN12Q6ZSI9 719 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 ARMCX6Q7L4S7 300 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 TTLL6Q8N841 843 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 TTLL11Q8NHH1 800 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 SSH3Q8TE77 659 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 ARPC5LQ9BPX5 153 aa6.25□□□□□ -1.41
VCAM1-202ENST00000347652 GPHNQ9NQX3 736 aaPredicted RBP6.25□□□□□ -1.41
VCAM1-202ENST00000347652 IGHDP01880 384 aa6.24□□□□□ -1.41
VCAM1-202ENST00000347652 SF3B3Q15393 1217 aaKnown RBP6.24□□□□□ -1.41
VCAM1-202ENST00000347652 EAPPQ56P03 285 aaPredicted RBP6.24□□□□□ -1.41
VCAM1-202ENST00000347652 C10orf62Q5T681 223 aaPredicted RBP6.24□□□□□ -1.41
VCAM1-202ENST00000347652 ARHGAP27Q6ZUM4 889 aa6.24□□□□□ -1.41
VCAM1-202ENST00000347652 NEUROD6Q96NK8 337 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms