RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PRAMEF22A3QJZ6 481 aa17.53■□□□□ 0.4
LMNA-201ENST00000347559 BTBD11A6QL63 1104 aa17.53■□□□□ 0.4
LMNA-201ENST00000347559 TFCP2Q12800 502 aa17.53■□□□□ 0.4
LMNA-201ENST00000347559 FOXP4Q8IVH2 680 aaPredicted RBP17.53■□□□□ 0.4
LMNA-201ENST00000347559 SLC35F6Q8N357 371 aa17.53■□□□□ 0.4
LMNA-201ENST00000347559 MSANTD4Q8NCY6 345 aa17.53■□□□□ 0.4
LMNA-201ENST00000347559 CTAGE9A4FU28 777 aa17.52■□□□□ 0.4
LMNA-201ENST00000347559 NLRP6P59044 892 aa17.52■□□□□ 0.4
LMNA-201ENST00000347559 HAND2P61296 217 aa17.52■□□□□ 0.4
LMNA-201ENST00000347559 LONRF3Q496Y0 759 aa17.52■□□□□ 0.4
LMNA-201ENST00000347559 RAD9BQ6WBX8 426 aa17.52■□□□□ 0.4
LMNA-201ENST00000347559 NOA1Q8NC60 698 aaKnown RBP17.52■□□□□ 0.4
LMNA-201ENST00000347559 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.4
LMNA-201ENST00000347559 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.52■□□□□ 0.4
LMNA-201ENST00000347559 AGLP35573 1532 aa17.52■□□□□ 0.4
LMNA-201ENST00000347559 SHC4Q6S5L8 630 aa17.52■□□□□ 0.4
LMNA-201ENST00000347559 GBP3Q9H0R5 595 aa17.52■□□□□ 0.4
LMNA-201ENST00000347559 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.39
LMNA-201ENST00000347559 ERLIN2O94905 339 aa17.52■□□□□ 0.39
LMNA-201ENST00000347559 ATP5JP18859 108 aa17.52■□□□□ 0.39
LMNA-201ENST00000347559 PSEN1P49768 467 aa17.52■□□□□ 0.39
LMNA-201ENST00000347559 CT47A1Q5JQC4 288 aaPredicted RBP17.52■□□□□ 0.39
LMNA-201ENST00000347559 METTL16Q86W50 562 aaKnown RBP17.52■□□□□ 0.39
LMNA-201ENST00000347559 ZNF274Q96GC6 653 aaPredicted RBP17.52■□□□□ 0.39
LMNA-201ENST00000347559 ADGRG1Q9Y653 693 aa17.52■□□□□ 0.39
LMNA-201ENST00000347559 ITSN1Q15811 1721 aa17.51■□□□□ 0.39
LMNA-201ENST00000347559 A0A087WUV0 522 aaPredicted RBP17.51■□□□□ 0.39
LMNA-201ENST00000347559 GOLGA8BA8MQT2 603 aa17.51■□□□□ 0.39
LMNA-201ENST00000347559 MYCNP04198 464 aaPredicted RBP17.51■□□□□ 0.39
LMNA-201ENST00000347559 PLEKHO1Q53GL0 409 aaPredicted RBP17.51■□□□□ 0.39
LMNA-201ENST00000347559 SMARCC1Q92922 1105 aaPredicted RBP17.51■□□□□ 0.39
LMNA-201ENST00000347559 AIFM3Q96NN9 605 aa17.51■□□□□ 0.39
LMNA-201ENST00000347559 SAMSN1Q9NSI8 373 aaKnown RBP17.51■□□□□ 0.39
LMNA-201ENST00000347559 BABAM1Q9NWV8 329 aa17.51■□□□□ 0.39
LMNA-201ENST00000347559 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
LMNA-201ENST00000347559 USP6P35125 1406 aa17.51■□□□□ 0.39
LMNA-201ENST00000347559 AKR1B15C9JRZ8 316 aaPredicted RBP17.51■□□□□ 0.39
LMNA-201ENST00000347559 GOLIM4O00461 696 aa17.51■□□□□ 0.39
LMNA-201ENST00000347559 BMP6P22004 513 aa17.51■□□□□ 0.39
LMNA-201ENST00000347559 CCT5P48643 541 aa17.51■□□□□ 0.39
LMNA-201ENST00000347559 FMR1Q06787 632 aaKnown RBP eCLIP17.51■□□□□ 0.391e-8■■■□□ 16.7
LMNA-201ENST00000347559 BRAPQ7Z569 592 aa17.51■□□□□ 0.39
LMNA-201ENST00000347559 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
LMNA-201ENST00000347559 KLF18A0A0U1RQI7 1052 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 SLC39A14Q15043 492 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 FBXW10Q5XX13 1052 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 CCDC102BQ68D86 513 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 MPRIPQ6WCQ1 1025 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 CXorf56Q9H5V9 222 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 ABCC6O95255 1503 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 ABL1P00519 1130 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 TNNI3KQ59H18 835 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 EPHA10Q5JZY3 1008 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 NCAPH2Q6IBW4 605 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 PPFIBP1Q86W92 1011 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 MED4Q9NPJ6 270 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 FPGT-TNNI3KV9GXZ4 949 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 SPATA31D1Q6ZQQ2 1576 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 SUGP1Q8IWZ8 645 aaKnown RBP17.5■□□□□ 0.39
LMNA-201ENST00000347559 LINS1Q8NG48 757 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 KAT2BQ92831 832 aa17.5■□□□□ 0.39
LMNA-201ENST00000347559 MAP2K2P36507 400 aa17.49■□□□□ 0.39
LMNA-201ENST00000347559 KIF23Q02241 960 aaPredicted RBP17.49■□□□□ 0.39
LMNA-201ENST00000347559 C14orf37Q86TY3 774 aa17.49■□□□□ 0.39
LMNA-201ENST00000347559 ACRBPQ8NEB7 543 aa17.49■□□□□ 0.39
LMNA-201ENST00000347559 ANKRD20A12PQ8NF67 263 aa17.49■□□□□ 0.39
LMNA-201ENST00000347559 NEUROD6Q96NK8 337 aa17.49■□□□□ 0.39
LMNA-201ENST00000347559 TEX33O43247 280 aa17.49■□□□□ 0.39
LMNA-201ENST00000347559 IGSF22Q8N9C0 903 aa17.49■□□□□ 0.39
LMNA-201ENST00000347559 TEX13AQ9BXU3 409 aaPredicted RBP17.49■□□□□ 0.39
LMNA-201ENST00000347559 MYH15Q9Y2K3 1946 aa17.49■□□□□ 0.39
LMNA-201ENST00000347559 ZMYND10O75800 440 aa17.48■□□□□ 0.39
LMNA-201ENST00000347559 HOXC9P31274 260 aa17.48■□□□□ 0.39
LMNA-201ENST00000347559 MMP14P50281 582 aa17.48■□□□□ 0.39
LMNA-201ENST00000347559 EIF5P55010 431 aaKnown RBP17.48■□□□□ 0.39
LMNA-201ENST00000347559 RBL2Q08999 1139 aa17.48■□□□□ 0.39
LMNA-201ENST00000347559 RIC3Q7Z5B4 369 aa17.48■□□□□ 0.39
LMNA-201ENST00000347559 HOOK1Q9UJC3 728 aaKnown RBP17.48■□□□□ 0.39
LMNA-201ENST00000347559 EXOC5O00471 708 aa17.48■□□□□ 0.39
LMNA-201ENST00000347559 KCNH3Q9ULD8 1083 aa17.48■□□□□ 0.39
LMNA-201ENST00000347559 KLHL10Q6JEL2 608 aa17.47■□□□□ 0.39
LMNA-201ENST00000347559 BANK1Q8NDB2 785 aa17.47■□□□□ 0.39
LMNA-201ENST00000347559 HINFPQ9BQA5 517 aa17.47■□□□□ 0.39
LMNA-201ENST00000347559 AGXT2Q9BYV1 514 aa17.47■□□□□ 0.39
LMNA-201ENST00000347559 RIMBP3CA6NJZ7 1639 aa17.47■□□□□ 0.39
LMNA-201ENST00000347559 RIMBP3BA6NNM3 1639 aa17.47■□□□□ 0.39
LMNA-201ENST00000347559 RIMBP3Q9UFD9 1639 aa17.47■□□□□ 0.39
LMNA-201ENST00000347559 PLEKHG3A1L390 1219 aa17.47■□□□□ 0.39
LMNA-201ENST00000347559 HSPD1P10809 573 aaKnown RBP17.47■□□□□ 0.39
LMNA-201ENST00000347559 GRAMD1CQ8IYS0 662 aa17.47■□□□□ 0.39
LMNA-201ENST00000347559 JMYQ8N9B5 988 aa17.47■□□□□ 0.39
LMNA-201ENST00000347559 NAPGQ99747 312 aaPredicted RBP17.47■□□□□ 0.39
LMNA-201ENST00000347559 SYF2O95926 243 aaKnown RBP17.47■□□□□ 0.39
LMNA-201ENST00000347559 EHD4Q9H223 541 aa17.47■□□□□ 0.39
LMNA-201ENST00000347559 RXRAP19793 462 aa17.46■□□□□ 0.39
LMNA-201ENST00000347559 KBTBD3Q8NAB2 608 aa17.46■□□□□ 0.39
LMNA-201ENST00000347559 STX17P56962 302 aa17.46■□□□□ 0.39
LMNA-201ENST00000347559 HPSEQ9Y251 543 aa17.46■□□□□ 0.39
LMNA-201ENST00000347559 FAM169AQ9Y6X4 670 aa17.46■□□□□ 0.39
LMNA-201ENST00000347559 EBAG9O00559 213 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms