RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ME3Q16798 604 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 KRT79Q5XKE5 535 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 SLF2Q8IX21 1173 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 NOX5Q96PH1 765 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 SLF1Q9BQI6 1058 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 MTUS1Q9ULD2 1270 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 CACNA2D3Q8IZS8 1091 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 FAM71BQ8TC56 605 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 NAP1L3Q99457 506 aaPredicted RBP19.59■□□□□ 0.73
SPAST-202ENST00000345662 PPP2R2CQ9Y2T4 447 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 JAK2O60674 1132 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 DTNBO60941 627 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 PPFIA4O75335 1185 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 GSTA5Q7RTV2 222 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 SPATS2Q86XZ4 545 aaKnown RBP19.59■□□□□ 0.73
SPAST-202ENST00000345662 WDR66Q8TBY9 1149 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 GNAT2P19087 354 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 GBP1P32455 592 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 PPP1R7Q15435 360 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 ANKLE2Q86XL3 938 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 CDC5LQ99459 802 aaKnown RBP19.59■□□□□ 0.73
SPAST-202ENST00000345662 E7EVH7 732 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 GNGT1P63211 74 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 PAK1Q13153 545 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 CCDC51Q96ER9 411 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 TEX13AQ9BXU3 409 aaPredicted RBP19.59■□□□□ 0.73
SPAST-202ENST00000345662 WWC3Q9ULE0 1092 aa19.59■□□□□ 0.73
SPAST-202ENST00000345662 ADALQ6DHV7 355 aa19.58■□□□□ 0.73
SPAST-202ENST00000345662 SREK1Q8WXA9 508 aaKnown RBP19.58■□□□□ 0.73
SPAST-202ENST00000345662 ANKIB1Q9P2G1 1089 aa19.58■□□□□ 0.73
SPAST-202ENST00000345662 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.73
SPAST-202ENST00000345662 TMEM110-MUSTN1A8MSY1 372 aa19.58■□□□□ 0.73
SPAST-202ENST00000345662 NAPAP54920 295 aa19.58■□□□□ 0.73
SPAST-202ENST00000345662 POSTNQ15063 836 aa19.58■□□□□ 0.73
SPAST-202ENST00000345662 LONRF3Q496Y0 759 aa19.58■□□□□ 0.73
SPAST-202ENST00000345662 OTUD7BQ6GQQ9 843 aa19.58■□□□□ 0.73
SPAST-202ENST00000345662 SAR1BQ9Y6B6 198 aa19.58■□□□□ 0.73
SPAST-202ENST00000345662 CFAP43Q8NDM7 1665 aa19.58■□□□□ 0.73
SPAST-202ENST00000345662 ADKP55263 362 aaKnown RBP19.58■□□□□ 0.72
SPAST-202ENST00000345662 CROCCP2Q86T23 111 aa19.58■□□□□ 0.72
SPAST-202ENST00000345662 RIMS2Q9UQ26 1411 aa19.58■□□□□ 0.72
SPAST-202ENST00000345662 ACTN4O43707 911 aaKnown RBP19.58■□□□□ 0.72
SPAST-202ENST00000345662 CHAMP1Q96JM3 812 aa19.58■□□□□ 0.72
SPAST-202ENST00000345662 FEZ2Q9UHY8 353 aaPredicted RBP19.58■□□□□ 0.72
SPAST-202ENST00000345662 RGS12O14924 1447 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 CDC25BP30305 580 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 TSNAXIP1Q2TAA8 658 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 FERMT2Q96AC1 680 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 BICC1Q9H694 974 aaKnown RBP19.57■□□□□ 0.72
SPAST-202ENST00000345662 RRP15Q9Y3B9 282 aaKnown RBP19.57■□□□□ 0.72
SPAST-202ENST00000345662 TDRD7Q8NHU6 1098 aaKnown RBP19.57■□□□□ 0.72
SPAST-202ENST00000345662 RABGGTAQ92696 567 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 TSNARE1Q96NA8 513 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 C6orf50Q9HD87 102 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.57■□□□□ 0.72
SPAST-202ENST00000345662 A0A1W2PP64 1363 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 FERP16591 822 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 LIG3P49916 1009 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 CEP85LQ5SZL2 805 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 GDAP1L1Q96MZ0 367 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 BAIAP2L1Q9UHR4 511 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 AMOTL2Q9Y2J4 779 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 PPIP5K1Q6PFW1 1433 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 TSPY3P0CV98 308 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 TSPY8P0CW00 308 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 AKAP4Q5JQC9 854 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 DNAI2Q9GZS0 605 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 UTP11Q9Y3A2 253 aaKnown RBP19.57■□□□□ 0.72
SPAST-202ENST00000345662 DUOX2Q9NRD8 1548 aa19.57■□□□□ 0.72
SPAST-202ENST00000345662 PNMA6EA0A0J9YXQ4 647 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 ZNF174Q15697 407 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 BCAS4Q8TDM0 211 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 PALD1Q9ULE6 856 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 ITSN2Q9NZM3 1697 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 FOXO3O43524 673 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 CFAP221Q4G0U5 840 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 VWA3BQ502W6 1294 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 USP37Q86T82 979 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 TTC6Q86TZ1 520 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 TMEM87BQ96K49 555 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 PPP1R12CQ9BZL4 782 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 TSKSQ9UJT2 592 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 ATP6V0A2Q9Y487 856 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 MRVI1Q9Y6F6 885 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 KDM5BQ9UGL1 1544 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 DEXIO95424 95 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 FBXO31Q5XUX0 539 aaPredicted RBP19.56■□□□□ 0.72
SPAST-202ENST00000345662 TMOD2Q9NZR1 351 aa19.56■□□□□ 0.72
SPAST-202ENST00000345662 PZPP20742 1482 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 GOLGA8KD6RF30 607 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 RAPGEF1Q13905 1077 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 CSGALNACT2Q8N6G5 542 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 RGS22Q8NE09 1264 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 CAPS2Q9BXY5 557 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 PDE11AQ9HCR9 933 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 RBM28Q9NW13 759 aaKnown RBP19.55■□□□□ 0.72
SPAST-202ENST00000345662 TAB2Q9NYJ8 693 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 PLCD1P51178 756 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 RNASE9P60153 205 aaKnown RBP19.55■□□□□ 0.72
SPAST-202ENST00000345662 PLIN2Q99541 437 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms