RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 CDAN1Q8IWY9 1227 aa24.35■■□□□ 1.49
CLTA-202ENST00000345519 ZIC5Q96T25 663 aa24.35■■□□□ 1.49
CLTA-202ENST00000345519 MROH7-TTC4A0A0A0MT08 1334 aa24.35■■□□□ 1.49
CLTA-202ENST00000345519 TCP10L2B9ZVM9 353 aa24.34■■□□□ 1.49
CLTA-202ENST00000345519 UBE2Q2LH0YL09 131 aa24.34■■□□□ 1.49
CLTA-202ENST00000345519 RAB11FIP3O75154 756 aa24.34■■□□□ 1.49
CLTA-202ENST00000345519 NSUN4Q96CB9 384 aaKnown RBP24.34■■□□□ 1.49
CLTA-202ENST00000345519 KIF1BPQ96EK5 621 aa24.34■■□□□ 1.49
CLTA-202ENST00000345519 YTHDC1Q96MU7 727 aaKnown RBP24.34■■□□□ 1.49
CLTA-202ENST00000345519 TMEM39BQ9GZU3 492 aa24.34■■□□□ 1.49
CLTA-202ENST00000345519 DDX60LQ5H9U9 1706 aaKnown RBP24.34■■□□□ 1.49
CLTA-202ENST00000345519 ATAD5Q96QE3 1844 aa24.33■■□□□ 1.49
CLTA-202ENST00000345519 COL2A1P02458 1487 aaPredicted RBP24.33■■□□□ 1.49
CLTA-202ENST00000345519 PPP1R12BO60237 982 aaPredicted RBP24.33■■□□□ 1.49
CLTA-202ENST00000345519 MECOMQ03112 1051 aa24.33■■□□□ 1.49
CLTA-202ENST00000345519 TTC39AQ5SRH9 613 aa24.33■■□□□ 1.49
CLTA-202ENST00000345519 ERICH6Q7L0X2 663 aa24.33■■□□□ 1.49
CLTA-202ENST00000345519 DZIP1Q86YF9 867 aaKnown RBP24.33■■□□□ 1.49
CLTA-202ENST00000345519 SLF2Q8IX21 1173 aa24.33■■□□□ 1.49
CLTA-202ENST00000345519 REM2Q8IYK8 340 aaPredicted RBP24.33■■□□□ 1.49
CLTA-202ENST00000345519 IDI2Q9BXS1 227 aa24.33■■□□□ 1.49
CLTA-202ENST00000345519 TMOD2Q9NZR1 351 aa24.33■■□□□ 1.49
CLTA-202ENST00000345519 ABCF2Q9UG63 623 aa24.33■■□□□ 1.49
CLTA-202ENST00000345519 ANGEL1Q9UNK9 670 aaKnown RBP24.33■■□□□ 1.49
CLTA-202ENST00000345519 PHIPQ8WWQ0 1821 aa24.33■■□□□ 1.48
CLTA-202ENST00000345519 DOCK1Q14185 1865 aa24.32■■□□□ 1.48
CLTA-202ENST00000345519 PTPRFP10586 1907 aa24.32■■□□□ 1.48
CLTA-202ENST00000345519 CA12O43570 354 aa24.32■■□□□ 1.48
CLTA-202ENST00000345519 CACNB3P54284 484 aa24.32■■□□□ 1.48
CLTA-202ENST00000345519 GRM1Q13255 1194 aa24.32■■□□□ 1.48
CLTA-202ENST00000345519 ATRNL1Q5VV63 1379 aa24.31■■□□□ 1.48
CLTA-202ENST00000345519 GPR75-ASB3A0A0A6YYF3 556 aa24.31■■□□□ 1.48
CLTA-202ENST00000345519 USP2O75604 605 aaPredicted RBP24.31■■□□□ 1.48
CLTA-202ENST00000345519 CYP2E1P05181 493 aaPredicted RBP24.31■■□□□ 1.48
CLTA-202ENST00000345519 CTCFP49711 727 aaPredicted RBP24.31■■□□□ 1.48
CLTA-202ENST00000345519 FAM151AQ8WW52 585 aa24.31■■□□□ 1.48
CLTA-202ENST00000345519 AIDAQ96BJ3 306 aa24.31■■□□□ 1.48
CLTA-202ENST00000345519 CCDC8Q9H0W5 538 aaPredicted RBP24.31■■□□□ 1.48
CLTA-202ENST00000345519 PRDM10Q9NQV6 1147 aa24.31■■□□□ 1.48
CLTA-202ENST00000345519 FAM198AQ9UFP1 575 aa24.31■■□□□ 1.48
CLTA-202ENST00000345519 FZD1Q9UP38 647 aa24.31■■□□□ 1.48
CLTA-202ENST00000345519 MYH1P12882 1939 aa24.31■■□□□ 1.48
CLTA-202ENST00000345519 CASP8AP2Q9UKL3 1982 aa24.31■■□□□ 1.48
CLTA-202ENST00000345519 MAP4K4O95819 1239 aaPredicted RBP24.3■■□□□ 1.48
CLTA-202ENST00000345519 HSPA8P11142 646 aaKnown RBP24.3■■□□□ 1.48
CLTA-202ENST00000345519 NFIAQ12857 509 aa24.3■■□□□ 1.48
CLTA-202ENST00000345519 TTLL12Q14166 644 aaPredicted RBP24.3■■□□□ 1.48
CLTA-202ENST00000345519 SAGE1Q9NXZ1 904 aa24.3■■□□□ 1.48
CLTA-202ENST00000345519 NPM3O75607 178 aaKnown RBP24.29■■□□□ 1.48
CLTA-202ENST00000345519 RHBDL3P58872 404 aa24.29■■□□□ 1.48
CLTA-202ENST00000345519 KIF23Q02241 960 aaPredicted RBP24.29■■□□□ 1.48
CLTA-202ENST00000345519 TBC1D9Q6ZT07 1266 aa24.29■■□□□ 1.48
CLTA-202ENST00000345519 AACSQ86V21 672 aa24.29■■□□□ 1.48
CLTA-202ENST00000345519 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.29■■□□□ 1.485e-8■□□□□ 9.7
CLTA-202ENST00000345519 ZBTB48P10074 688 aaPredicted RBP24.28■■□□□ 1.48
CLTA-202ENST00000345519 IREB2P48200 963 aaKnown RBP24.28■■□□□ 1.48
CLTA-202ENST00000345519 GSTO1P78417 241 aa24.28■■□□□ 1.48
CLTA-202ENST00000345519 CLASRPQ8N2M8 674 aaKnown RBP24.28■■□□□ 1.48
CLTA-202ENST00000345519 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.28■■□□□ 1.48
CLTA-202ENST00000345519 CSRNP1Q96S65 589 aa24.28■■□□□ 1.48
CLTA-202ENST00000345519 IL1RAPL2Q9NP60 686 aa24.28■■□□□ 1.48
CLTA-202ENST00000345519 ENTPD3O75355 529 aa24.27■■□□□ 1.48
CLTA-202ENST00000345519 WDHD1O75717 1129 aaPredicted RBP24.27■■□□□ 1.48
CLTA-202ENST00000345519 BTDP43251 543 aa24.27■■□□□ 1.48
CLTA-202ENST00000345519 PRKG1Q13976 671 aa24.27■■□□□ 1.48
CLTA-202ENST00000345519 TMED8Q6PL24 325 aaPredicted RBP24.27■■□□□ 1.48
CLTA-202ENST00000345519 ANKRD13AQ8IZ07 590 aa24.27■■□□□ 1.48
CLTA-202ENST00000345519 HOOK2Q96ED9 719 aa24.27■■□□□ 1.48
CLTA-202ENST00000345519 USP40Q9NVE5 1235 aa24.27■■□□□ 1.48
CLTA-202ENST00000345519 NAV1Q8NEY1 1877 aa24.26■■□□□ 1.47
CLTA-202ENST00000345519 ZAP70P43403 619 aa24.26■■□□□ 1.47
CLTA-202ENST00000345519 SPRYD7Q5W111 196 aa24.26■■□□□ 1.47
CLTA-202ENST00000345519 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.26■■□□□ 1.47
CLTA-202ENST00000345519 CLMNQ96JQ2 1002 aa24.26■■□□□ 1.47
CLTA-202ENST00000345519 BEGAINQ9BUH8 593 aa24.26■■□□□ 1.47
CLTA-202ENST00000345519 DCTPP1Q9H773 170 aa24.26■■□□□ 1.47
CLTA-202ENST00000345519 LDHCP07864 332 aa24.25■■□□□ 1.47
CLTA-202ENST00000345519 TM4SF4P48230 202 aa24.25■■□□□ 1.47
CLTA-202ENST00000345519 COL13A1Q5TAT6 717 aaPredicted RBP24.25■■□□□ 1.47
CLTA-202ENST00000345519 SNRKQ9NRH2 765 aa24.25■■□□□ 1.47
CLTA-202ENST00000345519 MAP3K10Q02779 954 aa24.24■■□□□ 1.47
CLTA-202ENST00000345519 WNK4Q96J92 1243 aa24.24■■□□□ 1.47
CLTA-202ENST00000345519 PIH1D3Q9NQM4 214 aaKnown RBP24.24■■□□□ 1.47
CLTA-202ENST00000345519 LRP2BPQ9P2M1 347 aa24.24■■□□□ 1.47
CLTA-202ENST00000345519 PPP4CP60510 307 aa24.23■■□□□ 1.47
CLTA-202ENST00000345519 DDX4Q9NQI0 724 aaKnown RBP24.23■■□□□ 1.47
CLTA-202ENST00000345519 RAI14Q9P0K7 980 aa24.23■■□□□ 1.47
CLTA-202ENST00000345519 ZNF112Q9UJU3 913 aa24.23■■□□□ 1.47
CLTA-202ENST00000345519 PCDHB15Q9Y5E8 787 aa24.23■■□□□ 1.47
CLTA-202ENST00000345519 RGS3P49796 1198 aa24.22■■□□□ 1.47
CLTA-202ENST00000345519 LBX1P52954 281 aa24.22■■□□□ 1.47
CLTA-202ENST00000345519 DCAF15Q66K64 600 aa24.22■■□□□ 1.47
CLTA-202ENST00000345519 CFHR5Q9BXR6 569 aa24.22■■□□□ 1.47
CLTA-202ENST00000345519 LRRCC1Q9C099 1032 aa24.22■■□□□ 1.47
CLTA-202ENST00000345519 GJA5P36382 358 aa24.21■■□□□ 1.47
CLTA-202ENST00000345519 AAMPQ13685 434 aa24.21■■□□□ 1.47
CLTA-202ENST00000345519 VGLL4Q14135 290 aa24.21■■□□□ 1.47
CLTA-202ENST00000345519 NAA16Q6N069 864 aaPredicted RBP24.21■■□□□ 1.47
CLTA-202ENST00000345519 SH3BP5LQ7L8J4 393 aa24.21■■□□□ 1.47
CLTA-202ENST00000345519 ADGRA1Q86SQ6 560 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms