RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 USP40Q9NVE5 1235 aa21.95■■□□□ 1.1
CKLF-202ENST00000345436 ABCF2Q9UG63 623 aa21.95■■□□□ 1.1
CKLF-202ENST00000345436 DAGLAQ9Y4D2 1042 aa21.95■■□□□ 1.1
CKLF-202ENST00000345436 PRDX5P30044 214 aa21.94■■□□□ 1.1
CKLF-202ENST00000345436 OS9Q13438 667 aaPredicted RBP21.94■■□□□ 1.1
CKLF-202ENST00000345436 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.94■■□□□ 1.1
CKLF-202ENST00000345436 ZNF341Q9BYN7 854 aa21.94■■□□□ 1.1
CKLF-202ENST00000345436 ARAP2Q8WZ64 1704 aa21.94■■□□□ 1.1
CKLF-202ENST00000345436 ADORA1P30542 326 aa21.93■■□□□ 1.1
CKLF-202ENST00000345436 CDC42EP5Q6NZY7 148 aa21.93■■□□□ 1.1
CKLF-202ENST00000345436 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.93■■□□□ 1.1
CKLF-202ENST00000345436 ITPRIPQ8IWB1 547 aa21.93■■□□□ 1.1
CKLF-202ENST00000345436 RPAP1Q9BWH6 1393 aaPredicted RBP21.92■■□□□ 1.1
CKLF-202ENST00000345436 TESPA1A2RU30 521 aaPredicted RBP21.92■■□□□ 1.1
CKLF-202ENST00000345436 UQCRFS1P1P0C7P4 283 aa21.92■■□□□ 1.1
CKLF-202ENST00000345436 GSTO1P78417 241 aa21.92■■□□□ 1.1
CKLF-202ENST00000345436 VGLL4Q14135 290 aa21.92■■□□□ 1.1
CKLF-202ENST00000345436 ARHGEF6Q15052 776 aa21.92■■□□□ 1.1
CKLF-202ENST00000345436 DIXDC1Q155Q3 683 aa21.92■■□□□ 1.1
CKLF-202ENST00000345436 ERICH6Q7L0X2 663 aa21.92■■□□□ 1.1
CKLF-202ENST00000345436 WRNIP1Q96S55 665 aa21.92■■□□□ 1.1
CKLF-202ENST00000345436 LDHCP07864 332 aa21.91■■□□□ 1.1
CKLF-202ENST00000345436 ATP8B2P98198 1209 aa21.91■■□□□ 1.1
CKLF-202ENST00000345436 RASGRF1Q13972 1273 aa21.91■■□□□ 1.1
CKLF-202ENST00000345436 ERO1BQ86YB8 467 aa21.91■■□□□ 1.1
CKLF-202ENST00000345436 FAM163AQ96GL9 167 aaPredicted RBP21.91■■□□□ 1.1
CKLF-202ENST00000345436 PNMA6EA0A0J9YXQ4 647 aa21.9■■□□□ 1.1
CKLF-202ENST00000345436 MLLT1Q03111 559 aaPredicted RBP21.9■■□□□ 1.1
CKLF-202ENST00000345436 TCP10Q12799 353 aa21.9■■□□□ 1.1
CKLF-202ENST00000345436 GPR108Q9NPR9 543 aa21.9■■□□□ 1.1
CKLF-202ENST00000345436 TNNQ9UQP3 1299 aa21.9■■□□□ 1.1
CKLF-202ENST00000345436 SPDYE5A6NIY4 337 aa21.89■■□□□ 1.09
CKLF-202ENST00000345436 MAP4K4O95819 1239 aaPredicted RBP21.89■■□□□ 1.09
CKLF-202ENST00000345436 CETPP11597 493 aa21.89■■□□□ 1.09
CKLF-202ENST00000345436 RGS19P49795 217 aa21.89■■□□□ 1.09
CKLF-202ENST00000345436 CCDC158Q5M9N0 1113 aa21.89■■□□□ 1.09
CKLF-202ENST00000345436 CDAN1Q8IWY9 1227 aa21.89■■□□□ 1.09
CKLF-202ENST00000345436 OTUD5Q96G74 571 aa21.89■■□□□ 1.09
CKLF-202ENST00000345436 ERO1AQ96HE7 468 aa21.89■■□□□ 1.09
CKLF-202ENST00000345436 CCL15-CCL14A0A0B4J2E2 113 aa21.88■■□□□ 1.09
CKLF-202ENST00000345436 IGF2BP3O00425 579 aaKnown RBP eCLIP21.88■■□□□ 1.09
CKLF-202ENST00000345436 ENTPD3O75355 529 aa21.88■■□□□ 1.09
CKLF-202ENST00000345436 SURF6O75683 361 aaKnown RBP21.88■■□□□ 1.09
CKLF-202ENST00000345436 GJA5P36382 358 aa21.88■■□□□ 1.09
CKLF-202ENST00000345436 CCL15Q16663 113 aa21.88■■□□□ 1.09
CKLF-202ENST00000345436 FBXO46Q6PJ61 603 aaPredicted RBP21.88■■□□□ 1.09
CKLF-202ENST00000345436 SPATA5Q8NB90 893 aa21.88■■□□□ 1.09
CKLF-202ENST00000345436 SSH3Q8TE77 659 aa21.88■■□□□ 1.09
CKLF-202ENST00000345436 ZFYVE28Q9HCC9 887 aa21.88■■□□□ 1.09
CKLF-202ENST00000345436 SNAPC2Q13487 334 aa21.87■■□□□ 1.09
CKLF-202ENST00000345436 POLA2Q14181 598 aa21.87■■□□□ 1.09
CKLF-202ENST00000345436 MIGA2Q7L4E1 593 aa21.87■■□□□ 1.09
CKLF-202ENST00000345436 ZSCAN29Q8IWY8 852 aaPredicted RBP21.87■■□□□ 1.09
CKLF-202ENST00000345436 MS4A4AQ96JQ5 239 aa21.87■■□□□ 1.09
CKLF-202ENST00000345436 NOL10Q9BSC4 688 aaKnown RBP21.87■■□□□ 1.09
CKLF-202ENST00000345436 IDI2Q9BXS1 227 aa21.87■■□□□ 1.09
CKLF-202ENST00000345436 ZCCHC17Q9NP64 241 aaKnown RBP21.87■■□□□ 1.09
CKLF-202ENST00000345436 GAKO14976 1311 aa21.86■■□□□ 1.09
CKLF-202ENST00000345436 ZBTB7BO15156 539 aaPredicted RBP21.86■■□□□ 1.09
CKLF-202ENST00000345436 IGSF3O75054 1194 aa21.86■■□□□ 1.09
CKLF-202ENST00000345436 PPATQ06203 517 aa21.86■■□□□ 1.09
CKLF-202ENST00000345436 ZKSCAN4Q969J2 545 aaPredicted RBP21.86■■□□□ 1.09
CKLF-202ENST00000345436 CHMP4BQ9H444 224 aaKnown RBP21.86■■□□□ 1.09
CKLF-202ENST00000345436 HMG20BQ9P0W2 317 aa21.86■■□□□ 1.09
CKLF-202ENST00000345436 ARID4AP29374 1257 aaPredicted RBP21.85■■□□□ 1.09
CKLF-202ENST00000345436 CRHR2Q13324 411 aa21.85■■□□□ 1.09
CKLF-202ENST00000345436 PPIL2Q13356 520 aa21.85■■□□□ 1.09
CKLF-202ENST00000345436 TTC39AQ5SRH9 613 aa21.85■■□□□ 1.09
CKLF-202ENST00000345436 RAI14Q9P0K7 980 aa21.85■■□□□ 1.09
CKLF-202ENST00000345436 LRP2BPQ9P2M1 347 aa21.85■■□□□ 1.09
CKLF-202ENST00000345436 HPS5Q9UPZ3 1129 aa21.85■■□□□ 1.09
CKLF-202ENST00000345436 SNCAIPQ9Y6H5 919 aa21.85■■□□□ 1.09
CKLF-202ENST00000345436 MYH13Q9UKX3 1938 aa21.84■■□□□ 1.09
CKLF-202ENST00000345436 BTDP43251 543 aa21.84■■□□□ 1.09
CKLF-202ENST00000345436 RGS3P49796 1198 aa21.84■■□□□ 1.09
CKLF-202ENST00000345436 SP3Q02447 781 aa21.84■■□□□ 1.09
CKLF-202ENST00000345436 MECOMQ03112 1051 aa21.84■■□□□ 1.09
CKLF-202ENST00000345436 NFIAQ12857 509 aa21.84■■□□□ 1.09
CKLF-202ENST00000345436 TAF1CQ15572 869 aaPredicted RBP21.84■■□□□ 1.09
CKLF-202ENST00000345436 PTPN18Q99952 460 aa21.84■■□□□ 1.09
CKLF-202ENST00000345436 R3HDMLQ9H3Y0 253 aa21.84■■□□□ 1.09
CKLF-202ENST00000345436 FAM198AQ9UFP1 575 aa21.84■■□□□ 1.09
CKLF-202ENST00000345436 ZNF112Q9UJU3 913 aa21.84■■□□□ 1.09
CKLF-202ENST00000345436 MROH7-TTC4A0A0A0MT08 1334 aa21.83■■□□□ 1.09
CKLF-202ENST00000345436 GPR75-ASB3A0A0A6YYF3 556 aa21.83■■□□□ 1.09
CKLF-202ENST00000345436 HSP90AB4PQ58FF6 505 aa21.83■■□□□ 1.09
CKLF-202ENST00000345436 TNNI3KQ59H18 835 aa21.83■■□□□ 1.09
CKLF-202ENST00000345436 ERC1Q8IUD2 1116 aa21.83■■□□□ 1.09
CKLF-202ENST00000345436 CNKSR2Q8WXI2 1034 aa21.83■■□□□ 1.09
CKLF-202ENST00000345436 BRI3BPQ8WY22 251 aa21.83■■□□□ 1.09
CKLF-202ENST00000345436 NOP58Q9Y2X3 529 aaKnown RBP21.83■■□□□ 1.09
CKLF-202ENST00000345436 TRIM17Q9Y577 477 aa21.83■■□□□ 1.09
CKLF-202ENST00000345436 FPGT-TNNI3KV9GXZ4 949 aa21.83■■□□□ 1.09
CKLF-202ENST00000345436 PICK1Q9NRD5 415 aa21.82■■□□□ 1.08
CKLF-202ENST00000345436 IRF6O14896 467 aa21.81■■□□□ 1.08
CKLF-202ENST00000345436 NPM3O75607 178 aaKnown RBP21.81■■□□□ 1.08
CKLF-202ENST00000345436 BAG3O95817 575 aa21.81■■□□□ 1.08
CKLF-202ENST00000345436 KIF22Q14807 665 aa21.81■■□□□ 1.08
CKLF-202ENST00000345436 NOL9Q5SY16 702 aaKnown RBP21.81■■□□□ 1.08
CKLF-202ENST00000345436 C1orf115Q9H7X2 142 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms