RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 CFAP100Q494V2 611 aa16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 NBPF12Q5TAG4 269 aaPredicted RBP16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 OTUD7BQ6GQQ9 843 aa16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 TBC1D9Q6ZT07 1266 aa16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 PRMT6Q96LA8 375 aaPredicted RBP16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 PTPN18Q99952 460 aa16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 IL1RAPL2Q9NP60 686 aa16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 COPRSQ9NQ92 184 aa16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 BRCA2P51587 3418 aa16.39■□□□□ 0.21
HERPUD1-202ENST00000344114 CLRN2A0PK11 232 aa16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 SNAP23O00161 211 aa16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 MYO1BO43795 1136 aa16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 MFAP1P55081 439 aaKnown RBP16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 SP3Q02447 781 aa16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 CASC1Q6TDU7 716 aa16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 ANKRD13AQ8IZ07 590 aa16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 CLASRPQ8N2M8 674 aaKnown RBP16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 BCL11AQ9H165 835 aa16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 EFCC1Q9HA90 598 aa16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 PA2G4Q9UQ80 394 aaKnown RBP16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 TTC41PQ6P2S7 1318 aa16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 EN2P19622 333 aaPredicted RBP16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 SDSP20132 328 aa16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 RFX5P48382 616 aaPredicted RBP16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 FOXO4P98177 505 aa16.38■□□□□ 0.21
HERPUD1-202ENST00000344114 ANKRD18BA2A2Z9 1011 aa16.37■□□□□ 0.21
HERPUD1-202ENST00000344114 F8W031 263 aaPredicted RBP16.37■□□□□ 0.21
HERPUD1-202ENST00000344114 TAF5LO75529 589 aa16.37■□□□□ 0.21
HERPUD1-202ENST00000344114 ZNF804AQ7Z570 1209 aa16.37■□□□□ 0.21
HERPUD1-202ENST00000344114 GPATCH3Q96I76 525 aa16.37■□□□□ 0.21
HERPUD1-202ENST00000344114 VEZTQ9HBM0 779 aa16.37■□□□□ 0.21
HERPUD1-202ENST00000344114 FXR1P51114 621 aaKnown RBP eCLIP16.36■□□□□ 0.21
HERPUD1-202ENST00000344114 RASA3Q14644 834 aa16.36■□□□□ 0.21
HERPUD1-202ENST00000344114 HELBQ8NG08 1087 aaPredicted RBP16.36■□□□□ 0.21
HERPUD1-202ENST00000344114 ZNF333Q96JL9 665 aa16.36■□□□□ 0.21
HERPUD1-202ENST00000344114 MS4A4AQ96JQ5 239 aa16.36■□□□□ 0.21
HERPUD1-202ENST00000344114 C22orf23Q9BZE7 217 aa16.36■□□□□ 0.21
HERPUD1-202ENST00000344114 LMBR1LQ6UX01 489 aa16.35■□□□□ 0.21
HERPUD1-202ENST00000344114 OPTNQ96CV9 577 aa16.35■□□□□ 0.21
HERPUD1-202ENST00000344114 ERC2O15083 957 aa16.34■□□□□ 0.21
HERPUD1-202ENST00000344114 IFIT2P09913 472 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-202ENST00000344114 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
HERPUD1-202ENST00000344114 ELP3Q9H9T3 547 aa16.34■□□□□ 0.21
HERPUD1-202ENST00000344114 FAM205AQ6ZU69 1335 aa16.34■□□□□ 0.21
HERPUD1-202ENST00000344114 ZSWIM8A7E2V4 1837 aa16.33■□□□□ 0.2
HERPUD1-202ENST00000344114 GLRX3O76003 335 aaKnown RBP16.33■□□□□ 0.2
HERPUD1-202ENST00000344114 RBM25P49756 843 aaKnown RBP16.33■□□□□ 0.2
HERPUD1-202ENST00000344114 IFIT5Q13325 482 aaKnown RBP16.33■□□□□ 0.2
HERPUD1-202ENST00000344114 TNFAIP1Q13829 316 aa16.33■□□□□ 0.2
HERPUD1-202ENST00000344114 PI4K2BQ8TCG2 481 aa16.33■□□□□ 0.2
HERPUD1-202ENST00000344114 TEPSINQ96N21 525 aa16.33■□□□□ 0.2
HERPUD1-202ENST00000344114 TMEM106CQ9BVX2 250 aa16.33■□□□□ 0.2
HERPUD1-202ENST00000344114 SIL1Q9H173 461 aa16.33■□□□□ 0.2
HERPUD1-202ENST00000344114 RBM5P52756 815 aaKnown RBP eCLIP16.32■□□□□ 0.2
HERPUD1-202ENST00000344114 TSHZ3Q63HK5 1081 aa16.32■□□□□ 0.2
HERPUD1-202ENST00000344114 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.32■□□□□ 0.2
HERPUD1-202ENST00000344114 AACSQ86V21 672 aa16.32■□□□□ 0.2
HERPUD1-202ENST00000344114 BRI3BPQ8WY22 251 aa16.32■□□□□ 0.2
HERPUD1-202ENST00000344114 ZNF70Q9UC06 446 aaPredicted RBP16.32■□□□□ 0.2
HERPUD1-202ENST00000344114 SERPINA10Q9UK55 444 aa16.32■□□□□ 0.2
HERPUD1-202ENST00000344114 FBXO3Q9UK99 471 aa16.32■□□□□ 0.2
HERPUD1-202ENST00000344114 JAG2Q9Y219 1238 aa16.32■□□□□ 0.2
HERPUD1-202ENST00000344114 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
HERPUD1-202ENST00000344114 MYH13Q9UKX3 1938 aa16.31■□□□□ 0.2
HERPUD1-202ENST00000344114 TRIM6-TRIM34B2RNG4 842 aa16.31■□□□□ 0.2
HERPUD1-202ENST00000344114 ARHGEF6Q15052 776 aa16.31■□□□□ 0.2
HERPUD1-202ENST00000344114 ERICH6Q7L0X2 663 aa16.31■□□□□ 0.2
HERPUD1-202ENST00000344114 KLHDC4Q8TBB5 520 aa16.31■□□□□ 0.2
HERPUD1-202ENST00000344114 ZFYVE28Q9HCC9 887 aa16.31■□□□□ 0.2
HERPUD1-202ENST00000344114 ECHDC1Q9NTX5 307 aa16.31■□□□□ 0.2
HERPUD1-202ENST00000344114 PTCH2Q9Y6C5 1203 aa16.31■□□□□ 0.2
HERPUD1-202ENST00000344114 CIAO1O76071 339 aa16.3■□□□□ 0.2
HERPUD1-202ENST00000344114 GTF2A2P52657 109 aa16.3■□□□□ 0.2
HERPUD1-202ENST00000344114 TAF1CQ15572 869 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-202ENST00000344114 SLC9C1Q4G0N8 1177 aa16.3■□□□□ 0.2
HERPUD1-202ENST00000344114 NBPF11Q86T75 865 aa16.3■□□□□ 0.2
HERPUD1-202ENST00000344114 CDAN1Q8IWY9 1227 aa16.3■□□□□ 0.2
HERPUD1-202ENST00000344114 TDRD7Q8NHU6 1098 aaKnown RBP16.3■□□□□ 0.2
HERPUD1-202ENST00000344114 CNKSR2Q8WXI2 1034 aa16.3■□□□□ 0.2
HERPUD1-202ENST00000344114 TDRD3Q9H7E2 651 aaKnown RBP16.3■□□□□ 0.2
HERPUD1-202ENST00000344114 CCL15-CCL14A0A0B4J2E2 113 aa16.29■□□□□ 0.2
HERPUD1-202ENST00000344114 REC8O95072 547 aa16.29■□□□□ 0.2
HERPUD1-202ENST00000344114 IL15P40933 162 aaPredicted RBP16.29■□□□□ 0.2
HERPUD1-202ENST00000344114 VGLL4Q14135 290 aa16.29■□□□□ 0.2
HERPUD1-202ENST00000344114 BECN1Q14457 450 aa16.29■□□□□ 0.2
HERPUD1-202ENST00000344114 CCL15Q16663 113 aa16.29■□□□□ 0.2
HERPUD1-202ENST00000344114 MFSD14BQ5SR56 506 aa16.29■□□□□ 0.2
HERPUD1-202ENST00000344114 FAM43AQ8N2R8 423 aa16.29■□□□□ 0.2
HERPUD1-202ENST00000344114 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.29■□□□□ 0.21e-12■■■□□ 16.3
HERPUD1-202ENST00000344114 RILPL2Q969X0 211 aa16.29■□□□□ 0.2
HERPUD1-202ENST00000344114 GPR108Q9NPR9 543 aa16.29■□□□□ 0.2
HERPUD1-202ENST00000344114 DAXXQ9UER7 740 aaPredicted RBP16.29■□□□□ 0.2
HERPUD1-202ENST00000344114 TTF2Q9UNY4 1162 aaKnown RBP16.29■□□□□ 0.2
HERPUD1-202ENST00000344114 COLQQ9Y215 455 aaPredicted RBP16.29■□□□□ 0.2
HERPUD1-202ENST00000344114 MAP3K9P80192 1104 aa16.28■□□□□ 0.2
HERPUD1-202ENST00000344114 CCDC57Q2TAC2 916 aa16.28■□□□□ 0.2
HERPUD1-202ENST00000344114 LDHAL6AQ6ZMR3 332 aa16.28■□□□□ 0.2
HERPUD1-202ENST00000344114 EAF2Q96CJ1 260 aaPredicted RBP16.28■□□□□ 0.2
HERPUD1-202ENST00000344114 ZNF594Q96JF6 807 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms