RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CEP131Q9UPN4 1083 aa4.22□□□□□ -1.73
SYNE2-202ENST00000344113 FGFR1OPO95684 399 aaKnown RBP4.22□□□□□ -1.73
SYNE2-202ENST00000344113 CUL3Q13618 768 aa4.22□□□□□ -1.73
SYNE2-202ENST00000344113 MCF2L2Q86YR7 1114 aa4.22□□□□□ -1.73
SYNE2-202ENST00000344113 ATRIPQ8WXE1 791 aa4.22□□□□□ -1.73
SYNE2-202ENST00000344113 DIS3LQ8TF46 1054 aaKnown RBP4.21□□□□□ -1.73
SYNE2-202ENST00000344113 MRFAP1L1Q96HT8 127 aa4.21□□□□□ -1.73
SYNE2-202ENST00000344113 ZBTB40Q9NUA8 1239 aa4.21□□□□□ -1.73
SYNE2-202ENST00000344113 GCLCP48506 637 aaPredicted RBP4.21□□□□□ -1.73
SYNE2-202ENST00000344113 PPP2R5EQ16537 467 aa4.21□□□□□ -1.73
SYNE2-202ENST00000344113 ERMNQ8TAM6 284 aa4.21□□□□□ -1.73
SYNE2-202ENST00000344113 FAM81AQ8TBF8 368 aa4.21□□□□□ -1.73
SYNE2-202ENST00000344113 P4HA2O15460 535 aa4.21□□□□□ -1.73
SYNE2-202ENST00000344113 TCERG1LQ5VWI1 586 aa4.21□□□□□ -1.73
SYNE2-202ENST00000344113 FAM212AQ96EL1 285 aa4.21□□□□□ -1.73
SYNE2-202ENST00000344113 BAG1Q99933 345 aaPredicted RBP4.21□□□□□ -1.73
SYNE2-202ENST00000344113 UPF3BQ9BZI7 483 aaKnown RBP4.21□□□□□ -1.73
SYNE2-202ENST00000344113 ITIH3Q06033 890 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 ERLEC1Q96DZ1 483 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 ANKIB1Q9P2G1 1089 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 RASAL2Q9UJF2 1139 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 WNT7AO00755 349 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 TTI1O43156 1089 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 XPOTO43592 962 aaKnown RBP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 RNASELQ05823 741 aaKnown RBP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 IQCA1Q86XH1 822 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 CNTRLQ7Z7A1 2325 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 BRD1O95696 1058 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 KRT6AP02538 564 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 KRT6BP04259 564 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 KRT6CP48668 564 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 NBPF14Q5TI25 921 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 ACRBPQ8NEB7 543 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 TRPC4APQ8TEL6 797 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 RWDD3Q9Y3V2 267 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 TRPA1O75762 1119 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 SERPINC1P01008 464 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 CRACR2BQ8N4Y2 399 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 ZC3H11AO75152 810 aaKnown RBP eCLIP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 YEATS4O95619 227 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 CROCCP3Q8IVE0 287 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 TMEM87AQ8NBN3 555 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 FBXO41Q8TF61 875 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 SH2B1Q9NRF2 756 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 STX3Q13277 289 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 PUS10Q3MIT2 529 aaKnown RBP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 DDX19AQ9NUU7 478 aaKnown RBP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 NCOA2Q15596 1464 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 NCOA1Q15788 1441 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 C8orf34Q49A92 452 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 NLRP9Q7RTR0 991 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 ATP6V0A1Q93050 837 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 COG7P83436 770 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 ZNF449Q6P9G9 518 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 AFAP1L1Q8TED9 768 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 DNAI1Q9UI46 699 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 FMNL1O95466 1100 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 KDM4CQ9H3R0 1056 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 RPGRIP1LQ68CZ1 1315 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 NCKAP5LQ9HCH0 1330 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 CDC45O75419 566 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 STK4Q13043 487 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 RASGRF1Q13972 1273 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 MAP7D3Q8IWC1 876 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 MICAL1Q8TDZ2 1067 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 OLFM3Q96PB7 478 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 PRPF3O43395 683 aaKnown RBP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 TRPC1P48995 793 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 TUBA3EQ6PEY2 450 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 EIF1ADQ8N9N8 165 aaKnown RBP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 FRA10AC1Q70Z53 315 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 PASD1Q8IV76 773 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 SIL1Q9H173 461 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 TPPPO94811 219 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 RIPK1Q13546 671 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 CCDC25Q86WR0 208 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 CEP19Q96LK0 163 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 CCDC43Q96MW1 224 aaKnown RBP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 FERMT1Q9BQL6 677 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 CYP4A11Q02928 519 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 CYP4A22Q5TCH4 519 aa4.21□□□□□ -1.74
SYNE2-202ENST00000344113 ZC3H18Q86VM9 953 aaKnown RBP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 RPGRQ92834 1020 aaKnown RBP4.21□□□□□ -1.74
SYNE2-202ENST00000344113 CCDC69A6NI79 296 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 RANBP1P43487 201 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 TERB1Q8NA31 727 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 HERC5Q9UII4 1024 aaKnown RBP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 CORO1CQ9ULV4 474 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 ATP5HO75947 161 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 CSTF2P33240 577 aaKnown RBP eCLIP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 NEK10Q6ZWH5 1172 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 EIF3CQ99613 913 aaKnown RBP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 MX1P20591 662 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 TSKSQ9UJT2 592 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 WBP11Q9Y2W2 641 aaKnown RBP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 CD2APQ9Y5K6 639 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 SKIP12755 728 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 RASIP1Q5U651 963 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms