RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 PFKFB2O60825 505 aa12.36□□□□□ -0.43
RPL28-201ENST00000344063 RILPL1Q5EBL4 403 aa12.36□□□□□ -0.43
RPL28-201ENST00000344063 COPRSQ9NQ92 184 aa12.36□□□□□ -0.43
RPL28-201ENST00000344063 E7EWF7 191 aa12.36□□□□□ -0.43
RPL28-201ENST00000344063 CALM1P0DP23 149 aa12.36□□□□□ -0.43
RPL28-201ENST00000344063 CALM2P0DP24 149 aa12.36□□□□□ -0.43
RPL28-201ENST00000344063 CALM3P0DP25 149 aa12.36□□□□□ -0.43
RPL28-201ENST00000344063 HNRNPH2P55795 449 aaKnown RBP12.36□□□□□ -0.43
RPL28-201ENST00000344063 TMEM87AQ8NBN3 555 aa12.36□□□□□ -0.43
RPL28-201ENST00000344063 DHX58Q96C10 678 aa12.36□□□□□ -0.43
RPL28-201ENST00000344063 CRNKL1Q9BZJ0 848 aaKnown RBP12.36□□□□□ -0.43
RPL28-201ENST00000344063 ZNF202O95125 648 aa12.36□□□□□ -0.43
RPL28-201ENST00000344063 GOLGA8FQ08AF8 430 aa12.36□□□□□ -0.43
RPL28-201ENST00000344063 GOLGA8DPQ0D2H9 430 aa12.36□□□□□ -0.43
RPL28-201ENST00000344063 SYCP1Q15431 976 aa12.36□□□□□ -0.43
RPL28-201ENST00000344063 IRS4O14654 1257 aaPredicted RBP12.35□□□□□ -0.43
RPL28-201ENST00000344063 GPAA1O43292 621 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 NLRP12P59046 1061 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 SPECC1Q5M775 1068 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 CABLES1Q8TDN4 633 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 TRIM47Q96LD4 638 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 ORAI2Q96SN7 254 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 DESI2Q9BSY9 194 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 LARGE1O95461 756 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 ADALQ6DHV7 355 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 CALML4Q96GE6 196 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 XAGE2Q96GT9 111 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 HAUS7Q99871 368 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 CUTAO60888 179 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 TAF5LO75529 589 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 LDHCP07864 332 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 HMGB2P26583 209 aaKnown RBP12.35□□□□□ -0.43
RPL28-201ENST00000344063 MTX1Q13505 466 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 TDRD12Q587J7 1177 aaKnown RBP12.35□□□□□ -0.43
RPL28-201ENST00000344063 REREQ9P2R6 1566 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 GNAQP50148 359 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
RPL28-201ENST00000344063 PI4K2BQ8TCG2 481 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 MRFAP1L1Q96HT8 127 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 ST7Q9NRC1 585 aa12.35□□□□□ -0.43
RPL28-201ENST00000344063 CYLC1P35663 651 aaPredicted RBP12.34□□□□□ -0.43
RPL28-201ENST00000344063 GYS2P54840 703 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 SPTY2D1Q68D10 685 aaPredicted RBP12.34□□□□□ -0.43
RPL28-201ENST00000344063 KCNH3Q9ULD8 1083 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 ANKRD65E5RJM6 399 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 C11orf57Q6ZUT1 292 aaPredicted RBP12.34□□□□□ -0.43
RPL28-201ENST00000344063 MICALCLQ6ZW33 695 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 OTUD6BQ8N6M0 293 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 ALS2CR12Q96Q35 445 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 USP28Q96RU2 1077 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 ETF1P62495 437 aaKnown RBP12.34□□□□□ -0.43
RPL28-201ENST00000344063 CKAP4Q07065 602 aaKnown RBP12.34□□□□□ -0.43
RPL28-201ENST00000344063 ZFYVE27Q5T4F4 411 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 ALKQ9UM73 1620 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 NLRP1Q9C000 1473 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 B4E1Z4 1266 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 PSMA7O14818 248 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 TUBBP07437 444 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 CALML3P27482 149 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 STAT6P42226 847 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 ADKP55263 362 aaKnown RBP12.34□□□□□ -0.43
RPL28-201ENST00000344063 CCDC178Q5BJE1 867 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 MAGEB6Q8N7X4 407 aa12.34□□□□□ -0.43
RPL28-201ENST00000344063 DDX41Q9UJV9 622 aaKnown RBP12.34□□□□□ -0.43
RPL28-201ENST00000344063 MYO1BO43795 1136 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 KRT2P35908 639 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 MYSM1Q5VVJ2 828 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 TDRD7Q8NHU6 1098 aaKnown RBP12.33□□□□□ -0.44
RPL28-201ENST00000344063 ZNF594Q96JF6 807 aaPredicted RBP12.33□□□□□ -0.44
RPL28-201ENST00000344063 FTOQ9C0B1 505 aaKnown RBP eCLIP12.33□□□□□ -0.44
RPL28-201ENST00000344063 ZPR1O75312 459 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 BAG3O95817 575 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 TRIM21P19474 475 aaKnown RBP12.33□□□□□ -0.44
RPL28-201ENST00000344063 NF2P35240 595 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 ANKRD18AQ8IVF6 992 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 FAM89AQ96GI7 184 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 KIAA1468Q9P260 1216 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 ABCA9Q8IUA7 1624 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 CCT6AP40227 531 aaKnown RBP12.33□□□□□ -0.44
RPL28-201ENST00000344063 CLCN6P51797 869 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 MLKLQ8NB16 471 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 DEXIO95424 95 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 IFFO1Q0D2I5 559 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 CNGA4Q8IV77 575 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 TRMT44Q8IYL2 757 aaKnown RBP12.33□□□□□ -0.44
RPL28-201ENST00000344063 IQUBQ8NA54 791 aa12.33□□□□□ -0.44
RPL28-201ENST00000344063 HSF2BPO75031 334 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 MBD4O95243 580 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 DZIP3Q86Y13 1208 aaKnown RBP12.32□□□□□ -0.44
RPL28-201ENST00000344063 HINFPQ9BQA5 517 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 A2ML1A8K2U0 1454 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 CYP2E1P05181 493 aaPredicted RBP12.32□□□□□ -0.44
RPL28-201ENST00000344063 GBP2P32456 591 aaPredicted RBP12.32□□□□□ -0.44
RPL28-201ENST00000344063 KRT40Q6A162 431 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 AFAP1L1Q8TED9 768 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 ANKIB1Q9P2G1 1089 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 PPRC1Q5VV67 1664 aaKnown RBP12.32□□□□□ -0.44
RPL28-201ENST00000344063 AKR1B15C9JRZ8 316 aaPredicted RBP12.32□□□□□ -0.44
RPL28-201ENST00000344063 ARHGAP6O43182 974 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms