RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TERF1P54274 439 aa9.03□□□□□ -0.96
ZNF540-202ENST00000343599 DMTNQ08495 405 aa9.03□□□□□ -0.96
ZNF540-202ENST00000343599 MAP3K21Q5TCX8 1036 aa9.03□□□□□ -0.96
ZNF540-202ENST00000343599 ZNF341Q9BYN7 854 aa9.03□□□□□ -0.96
ZNF540-202ENST00000343599 MINPP1Q9UNW1 487 aa9.03□□□□□ -0.96
ZNF540-202ENST00000343599 MYH2Q9UKX2 1941 aa9.03□□□□□ -0.96
ZNF540-202ENST00000343599 FSD2A1L4K1 749 aa9.03□□□□□ -0.96
ZNF540-202ENST00000343599 SNAPC2Q13487 334 aa9.03□□□□□ -0.96
ZNF540-202ENST00000343599 PARK7Q99497 189 aaKnown RBP9.03□□□□□ -0.96
ZNF540-202ENST00000343599 GCKRQ14397 625 aa9.02□□□□□ -0.97
ZNF540-202ENST00000343599 ABRAQ8N0Z2 381 aa9.02□□□□□ -0.97
ZNF540-202ENST00000343599 WDR18Q9BV38 432 aa9.02□□□□□ -0.97
ZNF540-202ENST00000343599 A0A0G2JLL6 359 aaPredicted RBP9.02□□□□□ -0.97
ZNF540-202ENST00000343599 IGHMBP2P38935 993 aaKnown RBP9.02□□□□□ -0.97
ZNF540-202ENST00000343599 PRRT2Q7Z6L0 340 aaPredicted RBP9.02□□□□□ -0.97
ZNF540-202ENST00000343599 SHCBP1Q8NEM2 672 aa9.02□□□□□ -0.97
ZNF540-202ENST00000343599 XAGE3Q8WTP9 111 aa9.02□□□□□ -0.97
ZNF540-202ENST00000343599 SOCS4Q8WXH5 440 aa9.02□□□□□ -0.97
ZNF540-202ENST00000343599 GGA3Q9NZ52 723 aa9.02□□□□□ -0.97
ZNF540-202ENST00000343599 PNMA3Q9UL41 463 aa9.02□□□□□ -0.97
ZNF540-202ENST00000343599 OGDHLQ9ULD0 1010 aa9.02□□□□□ -0.97
ZNF540-202ENST00000343599 WNT10BO00744 389 aa9.01□□□□□ -0.97
ZNF540-202ENST00000343599 AOC2O75106 756 aa9.01□□□□□ -0.97
ZNF540-202ENST00000343599 USP2O75604 605 aaPredicted RBP9.01□□□□□ -0.97
ZNF540-202ENST00000343599 NEXNQ0ZGT2 675 aa9.01□□□□□ -0.97
ZNF540-202ENST00000343599 ALDH1L2Q3SY69 923 aa9.01□□□□□ -0.97
ZNF540-202ENST00000343599 FAM151AQ8WW52 585 aa9.01□□□□□ -0.97
ZNF540-202ENST00000343599 TMEM106CQ9BVX2 250 aa9.01□□□□□ -0.97
ZNF540-202ENST00000343599 ZBTB12Q9Y330 459 aaPredicted RBP9.01□□□□□ -0.97
ZNF540-202ENST00000343599 KCNQ3O43525 872 aa9.01□□□□□ -0.97
ZNF540-202ENST00000343599 HMOX1P09601 288 aa9.01□□□□□ -0.97
ZNF540-202ENST00000343599 U2AF1L5P0DN76 240 aaPredicted RBP9.01□□□□□ -0.97
ZNF540-202ENST00000343599 XRCC6P12956 609 aaKnown RBP eCLIP9.01□□□□□ -0.97
ZNF540-202ENST00000343599 HOXA7P31268 230 aaPredicted RBP9.01□□□□□ -0.97
ZNF540-202ENST00000343599 SMAD3P84022 425 aaKnown RBP9.01□□□□□ -0.97
ZNF540-202ENST00000343599 U2AF1Q01081 240 aaKnown RBP eCLIP9.01□□□□□ -0.97
ZNF540-202ENST00000343599 SRRDQ9UH36 339 aa9.01□□□□□ -0.97
ZNF540-202ENST00000343599 NEURL1BA8MQ27 555 aa9.01□□□□□ -0.97
ZNF540-202ENST00000343599 MTX1Q13505 466 aa9.01□□□□□ -0.97
ZNF540-202ENST00000343599 MOGSQ13724 837 aa9.01□□□□□ -0.97
ZNF540-202ENST00000343599 TMCO4Q5TGY1 634 aa9.01□□□□□ -0.97
ZNF540-202ENST00000343599 RNF216Q9NWF9 866 aaPredicted RBP9.01□□□□□ -0.97
ZNF540-202ENST00000343599 COL6A1P12109 1028 aa9□□□□□ -0.97
ZNF540-202ENST00000343599 ARHGAP45Q92619 1136 aa9□□□□□ -0.97
ZNF540-202ENST00000343599 FGFR2P21802 821 aa9□□□□□ -0.97
ZNF540-202ENST00000343599 WDR66Q8TBY9 1149 aa9□□□□□ -0.97
ZNF540-202ENST00000343599 USP6NLQ92738 828 aa9□□□□□ -0.97
ZNF540-202ENST00000343599 ZFP91Q96JP5 570 aaPredicted RBP9□□□□□ -0.97
ZNF540-202ENST00000343599 ESPNB1AK53 854 aa8.99□□□□□ -0.97
ZNF540-202ENST00000343599 ZNF830Q96NB3 372 aaPredicted RBP8.99□□□□□ -0.97
ZNF540-202ENST00000343599 CD209Q9NNX6 404 aa8.99□□□□□ -0.97
ZNF540-202ENST00000343599 DIS3Q9Y2L1 958 aaKnown RBP8.99□□□□□ -0.97
ZNF540-202ENST00000343599 TNKSO95271 1327 aa8.99□□□□□ -0.97
ZNF540-202ENST00000343599 AKNAD1Q5T1N1 836 aa8.99□□□□□ -0.97
ZNF540-202ENST00000343599 C3orf67Q6ZVT6 689 aa8.99□□□□□ -0.97
ZNF540-202ENST00000343599 ZHX1Q9UKY1 873 aaPredicted RBP8.99□□□□□ -0.97
ZNF540-202ENST00000343599 CIZ1Q9ULV3 898 aaPredicted RBP8.99□□□□□ -0.97
ZNF540-202ENST00000343599 OLFML2BQ68BL8 750 aa8.99□□□□□ -0.97
ZNF540-202ENST00000343599 MTERF4Q7Z6M4 381 aaKnown RBP8.99□□□□□ -0.97
ZNF540-202ENST00000343599 HS6ST3Q8IZP7 471 aa8.99□□□□□ -0.97
ZNF540-202ENST00000343599 GDF15Q99988 308 aa8.99□□□□□ -0.97
ZNF540-202ENST00000343599 NPHP1O15259 732 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 FCGRTP55899 365 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 LACTBP83111 547 aaPredicted RBP8.98□□□□□ -0.97
ZNF540-202ENST00000343599 CAP1Q01518 475 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 PPP4R3BQ5MIZ7 849 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 HDGFL1Q5TGJ6 251 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 VGLL2Q8N8G2 317 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 EFCC1Q9HA90 598 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 PNMA2Q9UL42 364 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 GJA3Q9Y6H8 435 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 PLXNA1Q9UIW2 1896 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 ANKRD18BA2A2Z9 1011 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 CCDC85CA6NKD9 419 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 UFL1O94874 794 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 FAM110CQ1W6H9 321 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 ANGEL2Q5VTE6 544 aaKnown RBP8.98□□□□□ -0.97
ZNF540-202ENST00000343599 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.98□□□□□ -0.97
ZNF540-202ENST00000343599 SLC10A4Q96EP9 437 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 EHD4Q9H223 541 aa8.98□□□□□ -0.97
ZNF540-202ENST00000343599 MYH8P13535 1937 aa8.97□□□□□ -0.97
ZNF540-202ENST00000343599 ZNF521Q96K83 1311 aa8.97□□□□□ -0.97
ZNF540-202ENST00000343599 RIPK4P57078 832 aa8.97□□□□□ -0.97
ZNF540-202ENST00000343599 SHISA4Q96DD7 197 aa8.97□□□□□ -0.97
ZNF540-202ENST00000343599 TSEN34Q9BSV6 310 aaKnown RBP8.97□□□□□ -0.97
ZNF540-202ENST00000343599 WDR70Q9NW82 654 aa8.97□□□□□ -0.97
ZNF540-202ENST00000343599 AK9Q5TCS8 1911 aa8.97□□□□□ -0.97
ZNF540-202ENST00000343599 C19orf81C9J6K1 198 aa8.97□□□□□ -0.97
ZNF540-202ENST00000343599 CTNND1O60716 968 aaKnown RBP8.97□□□□□ -0.97
ZNF540-202ENST00000343599 KIF20AO95235 890 aa8.97□□□□□ -0.97
ZNF540-202ENST00000343599 FOXO4P98177 505 aa8.97□□□□□ -0.97
ZNF540-202ENST00000343599 DLGAP5Q15398 846 aa8.97□□□□□ -0.97
ZNF540-202ENST00000343599 SPTY2D1Q68D10 685 aaPredicted RBP8.97□□□□□ -0.97
ZNF540-202ENST00000343599 HERC5Q9UII4 1024 aaKnown RBP8.97□□□□□ -0.97
ZNF540-202ENST00000343599 TRAF5O00463 557 aa8.96□□□□□ -0.97
ZNF540-202ENST00000343599 DUSP27Q5VZP5 1158 aa8.96□□□□□ -0.97
ZNF540-202ENST00000343599 CELF1Q92879 486 aaKnown RBP8.96□□□□□ -0.97
ZNF540-202ENST00000343599 MYH1P12882 1939 aa8.96□□□□□ -0.97
ZNF540-202ENST00000343599 GOLGA6L3A6NEY3 463 aa8.96□□□□□ -0.98
ZNF540-202ENST00000343599 HMGB1P09429 215 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms