RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 V9GY48 417 aaPredicted RBP18.72■□□□□ 0.59
RDX-201ENST00000343115 NCOA3Q9Y6Q9 1424 aa18.71■□□□□ 0.59
RDX-201ENST00000343115 MROH1Q8NDA8 1641 aa18.71■□□□□ 0.59
RDX-201ENST00000343115 VWA3AA6NCI4 1184 aa18.71■□□□□ 0.59
RDX-201ENST00000343115 TOM1O60784 492 aa18.71■□□□□ 0.59
RDX-201ENST00000343115 ZNF827Q17R98 1081 aa18.71■□□□□ 0.59
RDX-201ENST00000343115 FBXO18Q8NFZ0 1043 aa18.71■□□□□ 0.59
RDX-201ENST00000343115 PUS7LQ9H0K6 701 aaKnown RBP18.71■□□□□ 0.59
RDX-201ENST00000343115 ADAMTS13Q76LX8 1427 aa18.71■□□□□ 0.59
RDX-201ENST00000343115 PDE8AO60658 829 aa18.71■□□□□ 0.59
RDX-201ENST00000343115 ERLIN1O75477 346 aa18.71■□□□□ 0.59
RDX-201ENST00000343115 MCM7P33993 719 aa18.71■□□□□ 0.59
RDX-201ENST00000343115 RBM5P52756 815 aaKnown RBP eCLIP18.71■□□□□ 0.59
RDX-201ENST00000343115 KANK3Q6NY19 840 aa18.71■□□□□ 0.59
RDX-201ENST00000343115 KIAA1524Q8TCG1 905 aa18.71■□□□□ 0.59
RDX-201ENST00000343115 PDE4BQ07343 736 aa18.7■□□□□ 0.58
RDX-201ENST00000343115 ARID5BQ14865 1188 aa18.7■□□□□ 0.58
RDX-201ENST00000343115 PGBD1Q96JS3 809 aa18.7■□□□□ 0.58
RDX-201ENST00000343115 DEPDC5O75140 1603 aa18.7■□□□□ 0.58
RDX-201ENST00000343115 PDE6AP16499 860 aa18.7■□□□□ 0.58
RDX-201ENST00000343115 ELF2Q15723 593 aa18.7■□□□□ 0.58
RDX-201ENST00000343115 PPLO60437 1756 aa18.7■□□□□ 0.58
RDX-201ENST00000343115 MPHOSPH10O00566 681 aaKnown RBP18.7■□□□□ 0.58
RDX-201ENST00000343115 JAKMIP3Q5VZ66 844 aa18.7■□□□□ 0.58
RDX-201ENST00000343115 TMEM87BQ96K49 555 aa18.7■□□□□ 0.58
RDX-201ENST00000343115 CEP89Q96ST8 783 aa18.7■□□□□ 0.58
RDX-201ENST00000343115 RESTQ13127 1097 aa18.7■□□□□ 0.58
RDX-201ENST00000343115 BTBD18B2RXH4 712 aa18.69■□□□□ 0.58
RDX-201ENST00000343115 GTF2F1P35269 517 aaKnown RBP eCLIP18.69■□□□□ 0.58
RDX-201ENST00000343115 CRNKL1Q9BZJ0 848 aaKnown RBP18.69■□□□□ 0.58
RDX-201ENST00000343115 MCM9Q9NXL9 1143 aa18.69■□□□□ 0.58
RDX-201ENST00000343115 DPCR1Q3MIW9 517 aa18.69■□□□□ 0.58
RDX-201ENST00000343115 KRT222Q8N1A0 295 aa18.69■□□□□ 0.58
RDX-201ENST00000343115 SPATA5Q8NB90 893 aa18.69■□□□□ 0.58
RDX-201ENST00000343115 SEC63Q9UGP8 760 aaKnown RBP18.69■□□□□ 0.58
RDX-201ENST00000343115 TMEM87AQ8NBN3 555 aa18.69■□□□□ 0.58
RDX-201ENST00000343115 NFE2L3Q9Y4A8 694 aa18.69■□□□□ 0.58
RDX-201ENST00000343115 ERVV-2B6SEH9 535 aa18.68■□□□□ 0.58
RDX-201ENST00000343115 CCT6AP40227 531 aaKnown RBP18.68■□□□□ 0.58
RDX-201ENST00000343115 MTIF2P46199 727 aaKnown RBP18.68■□□□□ 0.58
RDX-201ENST00000343115 CCDC181Q5TID7 509 aa18.68■□□□□ 0.58
RDX-201ENST00000343115 LPIN2Q92539 896 aa18.68■□□□□ 0.58
RDX-201ENST00000343115 YEATS4O95619 227 aa18.68■□□□□ 0.58
RDX-201ENST00000343115 HEATR3Q7Z4Q2 680 aa18.68■□□□□ 0.58
RDX-201ENST00000343115 C6orf229H3BNL8 230 aa18.68■□□□□ 0.58
RDX-201ENST00000343115 KIF5BP33176 963 aa18.68■□□□□ 0.58
RDX-201ENST00000343115 SDR42E1Q8WUS8 393 aa18.68■□□□□ 0.58
RDX-201ENST00000343115 TRIM47Q96LD4 638 aa18.68■□□□□ 0.58
RDX-201ENST00000343115 CDC42BPGQ6DT37 1551 aa18.68■□□□□ 0.58
RDX-201ENST00000343115 BMS1Q14692 1282 aaKnown RBP18.68■□□□□ 0.58
RDX-201ENST00000343115 VPS54Q9P1Q0 977 aa18.68■□□□□ 0.58
RDX-201ENST00000343115 AGLP35573 1532 aa18.68■□□□□ 0.58
RDX-201ENST00000343115 BCAMP50895 628 aa18.67■□□□□ 0.58
RDX-201ENST00000343115 NLRP12P59046 1061 aa18.67■□□□□ 0.58
RDX-201ENST00000343115 RPAP1Q9BWH6 1393 aaPredicted RBP18.67■□□□□ 0.58
RDX-201ENST00000343115 LRRC8AQ8IWT6 810 aa18.67■□□□□ 0.58
RDX-201ENST00000343115 AK7Q96M32 723 aa18.67■□□□□ 0.58
RDX-201ENST00000343115 RCOR1Q9UKL0 485 aa18.67■□□□□ 0.58
RDX-201ENST00000343115 ZNF215Q9UL58 517 aaPredicted RBP18.67■□□□□ 0.58
RDX-201ENST00000343115 CTSWP56202 376 aa18.67■□□□□ 0.58
RDX-201ENST00000343115 MCM6Q14566 821 aa18.67■□□□□ 0.58
RDX-201ENST00000343115 NLRP3Q96P20 1036 aa18.67■□□□□ 0.58
RDX-201ENST00000343115 PUF60Q9UHX1 559 aaKnown RBP18.67■□□□□ 0.58
RDX-201ENST00000343115 ZBTB38Q8NAP3 1195 aaPredicted RBP18.66■□□□□ 0.58
RDX-201ENST00000343115 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.66■□□□□ 0.584e-7■■■□□ 17.5
RDX-201ENST00000343115 CARMIL3Q8ND23 1372 aa18.66■□□□□ 0.58
RDX-201ENST00000343115 STAT6P42226 847 aa18.66■□□□□ 0.58
RDX-201ENST00000343115 LEKR1Q6ZMV7 388 aa18.66■□□□□ 0.58
RDX-201ENST00000343115 TCP11L1Q9NUJ3 509 aa18.66■□□□□ 0.58
RDX-201ENST00000343115 ZBTB1Q9Y2K1 713 aa18.66■□□□□ 0.58
RDX-201ENST00000343115 NRKQ7Z2Y5 1582 aa18.66■□□□□ 0.58
RDX-201ENST00000343115 PTPRUQ92729 1446 aa18.66■□□□□ 0.58
RDX-201ENST00000343115 GOLGA8FQ08AF8 430 aa18.66■□□□□ 0.58
RDX-201ENST00000343115 GOLGA8DPQ0D2H9 430 aa18.66■□□□□ 0.58
RDX-201ENST00000343115 TDRD7Q8NHU6 1098 aaKnown RBP18.66■□□□□ 0.58
RDX-201ENST00000343115 ZFP91Q96JP5 570 aaPredicted RBP18.66■□□□□ 0.58
RDX-201ENST00000343115 BAG1Q99933 345 aaPredicted RBP18.66■□□□□ 0.58
RDX-201ENST00000343115 TFCP2L1Q9NZI6 479 aa18.66■□□□□ 0.58
RDX-201ENST00000343115 TCEAL9Q9UHQ7 104 aa18.66■□□□□ 0.58
RDX-201ENST00000343115 ARHGEF28Q8N1W1 1705 aaKnown RBP18.66■□□□□ 0.58
RDX-201ENST00000343115 RILPL1Q5EBL4 403 aa18.66■□□□□ 0.58
RDX-201ENST00000343115 CCDC178Q5BJE1 867 aa18.65■□□□□ 0.58
RDX-201ENST00000343115 CCDC43Q96MW1 224 aaKnown RBP18.65■□□□□ 0.58
RDX-201ENST00000343115 INCENPQ9NQS7 918 aa18.65■□□□□ 0.58
RDX-201ENST00000343115 PREX1Q8TCU6 1659 aa18.65■□□□□ 0.58
RDX-201ENST00000343115 GNAT2P19087 354 aa18.65■□□□□ 0.58
RDX-201ENST00000343115 KRT2P35908 639 aa18.65■□□□□ 0.58
RDX-201ENST00000343115 AKNAD1Q5T1N1 836 aa18.65■□□□□ 0.58
RDX-201ENST00000343115 IFNL3Q8IZI9 196 aa18.65■□□□□ 0.58
RDX-201ENST00000343115 ZNF397Q8NF99 534 aaPredicted RBP18.65■□□□□ 0.58
RDX-201ENST00000343115 VPS16Q9H269 839 aa18.65■□□□□ 0.58
RDX-201ENST00000343115 BMP2KQ9NSY1 1161 aaPredicted RBP18.65■□□□□ 0.58
RDX-201ENST00000343115 F8W031 263 aaPredicted RBP18.64■□□□□ 0.58
RDX-201ENST00000343115 PCCAP05165 728 aaPredicted RBP18.64■□□□□ 0.58
RDX-201ENST00000343115 SETDB2Q96T68 719 aa18.64■□□□□ 0.58
RDX-201ENST00000343115 CARD6Q9BX69 1037 aa18.64■□□□□ 0.58
RDX-201ENST00000343115 SERTAD1Q9UHV2 236 aa18.64■□□□□ 0.58
RDX-201ENST00000343115 WWC3Q9ULE0 1092 aa18.64■□□□□ 0.58
RDX-201ENST00000343115 EIF3JO75822 258 aaKnown RBP18.64■□□□□ 0.57
RDX-201ENST00000343115 TSPY3P0CV98 308 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms