RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 ZNF174Q15697 407 aa14.44□□□□□ -0.1
LMX1A-202ENST00000342310 ADALQ6DHV7 355 aa14.44□□□□□ -0.1
LMX1A-202ENST00000342310 CCDC34Q96HJ3 373 aa14.44□□□□□ -0.1
LMX1A-202ENST00000342310 ATP6V1AP38606 617 aa14.43□□□□□ -0.1
LMX1A-202ENST00000342310 NCBP1Q09161 790 aaKnown RBP14.43□□□□□ -0.1
LMX1A-202ENST00000342310 ARHGAP29Q52LW3 1261 aa14.43□□□□□ -0.1
LMX1A-202ENST00000342310 NKX2-3Q8TAU0 364 aa14.43□□□□□ -0.1
LMX1A-202ENST00000342310 PCDHA5Q9Y5H7 936 aa14.43□□□□□ -0.1
LMX1A-202ENST00000342310 PCDH11XQ9BZA7 1347 aa14.43□□□□□ -0.1
LMX1A-202ENST00000342310 PCDH11YQ9BZA8 1340 aa14.43□□□□□ -0.1
LMX1A-202ENST00000342310 SMTNL1A8MU46 457 aa14.43□□□□□ -0.1
LMX1A-202ENST00000342310 EXOC5O00471 708 aa14.43□□□□□ -0.1
LMX1A-202ENST00000342310 CDKL5O76039 1030 aa14.43□□□□□ -0.1
LMX1A-202ENST00000342310 IGHMBP2P38935 993 aaKnown RBP14.43□□□□□ -0.1
LMX1A-202ENST00000342310 CCT6AP40227 531 aaKnown RBP14.43□□□□□ -0.1
LMX1A-202ENST00000342310 RTN1Q16799 776 aa14.43□□□□□ -0.1
LMX1A-202ENST00000342310 DPF2Q92785 391 aa14.43□□□□□ -0.1
LMX1A-202ENST00000342310 KCNH3Q9ULD8 1083 aa14.43□□□□□ -0.1
LMX1A-202ENST00000342310 NPHP4O75161 1426 aaPredicted RBP14.43□□□□□ -0.1
LMX1A-202ENST00000342310 VAT1LQ9HCJ6 419 aa14.42□□□□□ -0.1
LMX1A-202ENST00000342310 ZSWIM5Q9P217 1185 aa14.42□□□□□ -0.1
LMX1A-202ENST00000342310 GRIN1Q05586 938 aa14.42□□□□□ -0.1
LMX1A-202ENST00000342310 IQCB1Q15051 598 aa14.42□□□□□ -0.1
LMX1A-202ENST00000342310 BBXQ8WY36 941 aaPredicted RBP14.42□□□□□ -0.1
LMX1A-202ENST00000342310 LLPHQ9BRT6 129 aaKnown RBP14.42□□□□□ -0.1
LMX1A-202ENST00000342310 TFCP2L1Q9NZI6 479 aa14.42□□□□□ -0.1
LMX1A-202ENST00000342310 NRXN3Q9Y4C0 1643 aa14.42□□□□□ -0.1
LMX1A-202ENST00000342310 APOA5Q6Q788 366 aa14.42□□□□□ -0.1
LMX1A-202ENST00000342310 PLCD3Q8N3E9 789 aa14.42□□□□□ -0.1
LMX1A-202ENST00000342310 PUF60Q9UHX1 559 aaKnown RBP14.42□□□□□ -0.1
LMX1A-202ENST00000342310 V9GY48 417 aaPredicted RBP14.42□□□□□ -0.1
LMX1A-202ENST00000342310 SLC5A1P13866 664 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 GTF2F1P35269 517 aaKnown RBP eCLIP14.41□□□□□ -0.1
LMX1A-202ENST00000342310 PPARDQ03181 441 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 FAM47AQ5JRC9 791 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 ZNF274Q96GC6 653 aaPredicted RBP14.41□□□□□ -0.1
LMX1A-202ENST00000342310 BLZF1Q9H2G9 400 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 SERTAD1Q9UHV2 236 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 C3P01024 1663 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 ZFYP08048 801 aaPredicted RBP14.41□□□□□ -0.1
LMX1A-202ENST00000342310 TNNT3P45378 269 aaPredicted RBP14.41□□□□□ -0.1
LMX1A-202ENST00000342310 DNA2P51530 1060 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 ANTXR2P58335 489 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 KIF23Q02241 960 aaPredicted RBP14.41□□□□□ -0.1
LMX1A-202ENST00000342310 PDE4CQ08493 712 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 DHX40Q8IX18 779 aaKnown RBP14.41□□□□□ -0.1
LMX1A-202ENST00000342310 CARD6Q9BX69 1037 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 NFE2L3Q9Y4A8 694 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 HEG1Q9ULI3 1381 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 AGLP35573 1532 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 VWA3AA6NCI4 1184 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 FAM205CA6NFA0 338 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 TERF1P54274 439 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 EXOSC10Q01780 885 aaKnown RBP14.41□□□□□ -0.1
LMX1A-202ENST00000342310 RABL6Q3YEC7 729 aaPredicted RBP14.41□□□□□ -0.1
LMX1A-202ENST00000342310 USP49Q70CQ1 688 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 ILDR1Q86SU0 546 aaPredicted RBP14.41□□□□□ -0.1
LMX1A-202ENST00000342310 PLA2G4DQ86XP0 818 aa14.41□□□□□ -0.1
LMX1A-202ENST00000342310 USPL1Q5W0Q7 1092 aa14.4□□□□□ -0.1
LMX1A-202ENST00000342310 TTLL11Q8NHH1 800 aa14.4□□□□□ -0.1
LMX1A-202ENST00000342310 NEDD4P46934 1319 aa14.4□□□□□ -0.1
LMX1A-202ENST00000342310 SMARCE1Q969G3 411 aa14.4□□□□□ -0.1
LMX1A-202ENST00000342310 PRDM4Q9UKN5 801 aa14.4□□□□□ -0.1
LMX1A-202ENST00000342310 KDM6AO15550 1401 aaPredicted RBP14.4□□□□□ -0.1
LMX1A-202ENST00000342310 FKBP15Q5T1M5 1219 aa14.4□□□□□ -0.1
LMX1A-202ENST00000342310 FMR1NBQ8N0W7 255 aaPredicted RBP14.4□□□□□ -0.1
LMX1A-202ENST00000342310 SMARCC2Q8TAQ2 1214 aa14.4□□□□□ -0.1
LMX1A-202ENST00000342310 PAXBP1Q9Y5B6 917 aa14.4□□□□□ -0.1
LMX1A-202ENST00000342310 MEGF6O75095 1541 aa14.39□□□□□ -0.11
LMX1A-202ENST00000342310 PDIA4P13667 645 aaKnown RBP14.39□□□□□ -0.11
LMX1A-202ENST00000342310 ATP2B2Q01814 1243 aa14.39□□□□□ -0.11
LMX1A-202ENST00000342310 IFNL3Q8IZI9 196 aa14.39□□□□□ -0.11
LMX1A-202ENST00000342310 LCORLQ8N3X6 602 aa14.39□□□□□ -0.11
LMX1A-202ENST00000342310 SPATA5Q8NB90 893 aa14.39□□□□□ -0.11
LMX1A-202ENST00000342310 OXER1Q8TDS5 423 aa14.39□□□□□ -0.11
LMX1A-202ENST00000342310 HOOK1Q9UJC3 728 aaKnown RBP14.39□□□□□ -0.11
LMX1A-202ENST00000342310 SLU7O95391 586 aaKnown RBP14.39□□□□□ -0.11
LMX1A-202ENST00000342310 MCM7P33993 719 aa14.39□□□□□ -0.11
LMX1A-202ENST00000342310 CTSWP56202 376 aa14.39□□□□□ -0.11
LMX1A-202ENST00000342310 PPFIBP1Q86W92 1011 aa14.39□□□□□ -0.11
LMX1A-202ENST00000342310 LRRN4CLQ8ND94 238 aa14.39□□□□□ -0.11
LMX1A-202ENST00000342310 SH3TC1Q8TE82 1336 aa14.39□□□□□ -0.11
LMX1A-202ENST00000342310 CCDC12Q8WUD4 166 aaPredicted RBP14.39□□□□□ -0.11
LMX1A-202ENST00000342310 SPTLC3Q9NUV7 552 aa14.39□□□□□ -0.11
LMX1A-202ENST00000342310 MYL5Q02045 173 aa14.38□□□□□ -0.11
LMX1A-202ENST00000342310 RASGRF1Q13972 1273 aa14.38□□□□□ -0.11
LMX1A-202ENST00000342310 ENOX2Q16206 610 aaKnown RBP14.38□□□□□ -0.11
LMX1A-202ENST00000342310 ZBTB38Q8NAP3 1195 aaPredicted RBP14.38□□□□□ -0.11
LMX1A-202ENST00000342310 IRX2Q9BZI1 471 aaPredicted RBP14.38□□□□□ -0.11
LMX1A-202ENST00000342310 SLAIN2Q9P270 581 aa14.38□□□□□ -0.11
LMX1A-202ENST00000342310 STX8Q9UNK0 236 aa14.38□□□□□ -0.11
LMX1A-202ENST00000342310 PCDHB6Q9Y5E3 794 aa14.38□□□□□ -0.11
LMX1A-202ENST00000342310 ANKARQ7Z5J8 1434 aa14.38□□□□□ -0.11
LMX1A-202ENST00000342310 PDE8BO95263 885 aa14.38□□□□□ -0.11
LMX1A-202ENST00000342310 DYNLL1P63167 89 aaKnown RBP14.38□□□□□ -0.11
LMX1A-202ENST00000342310 NLRP10Q86W26 655 aa14.38□□□□□ -0.11
LMX1A-202ENST00000342310 RTEL1Q9NZ71 1219 aa14.38□□□□□ -0.11
LMX1A-202ENST00000342310 PHACTR2O75167 634 aa14.38□□□□□ -0.11
LMX1A-202ENST00000342310 SEC31AO94979 1220 aaKnown RBP14.38□□□□□ -0.11
LMX1A-202ENST00000342310 ZSCAN20P17040 1043 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms