RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 AOX1Q06278 1338 aa13.65□□□□□ -0.22
RTN3-203ENST00000341307 WNK3Q9BYP7 1800 aa13.65□□□□□ -0.22
RTN3-203ENST00000341307 H0YHG0 523 aa13.65□□□□□ -0.22
RTN3-203ENST00000341307 SARNPP82979 210 aaKnown RBP13.65□□□□□ -0.22
RTN3-203ENST00000341307 RBM43Q6ZSC3 357 aaKnown RBP13.65□□□□□ -0.22
RTN3-203ENST00000341307 FAM196AQ6ZSG2 479 aa13.65□□□□□ -0.22
RTN3-203ENST00000341307 GNL3LQ9NVN8 582 aaKnown RBP13.65□□□□□ -0.22
RTN3-203ENST00000341307 ERLIN2O94905 339 aa13.64□□□□□ -0.23
RTN3-203ENST00000341307 STAG1Q8WVM7 1258 aa13.64□□□□□ -0.23
RTN3-203ENST00000341307 SLC24A3Q9HC58 644 aa13.64□□□□□ -0.23
RTN3-203ENST00000341307 CHMP3Q9Y3E7 222 aa13.64□□□□□ -0.23
RTN3-203ENST00000341307 GOLGB1Q14789 3259 aaKnown RBP13.64□□□□□ -0.23
RTN3-203ENST00000341307 ANKRD33BA6NCL7 494 aa13.64□□□□□ -0.23
RTN3-203ENST00000341307 PAX7P23759 505 aa13.64□□□□□ -0.23
RTN3-203ENST00000341307 SSR1P43307 286 aaKnown RBP13.64□□□□□ -0.23
RTN3-203ENST00000341307 FBXW10Q5XX13 1052 aa13.64□□□□□ -0.23
RTN3-203ENST00000341307 ITFG2Q969R8 447 aa13.64□□□□□ -0.23
RTN3-203ENST00000341307 ECHDC1Q9NTX5 307 aa13.64□□□□□ -0.23
RTN3-203ENST00000341307 CASP7P55210 303 aa13.63□□□□□ -0.23
RTN3-203ENST00000341307 EN1Q05925 392 aaPredicted RBP13.63□□□□□ -0.23
RTN3-203ENST00000341307 APOBRQ0VD83 1088 aa13.63□□□□□ -0.23
RTN3-203ENST00000341307 LONRF2Q1L5Z9 754 aa13.63□□□□□ -0.23
RTN3-203ENST00000341307 ERC1Q8IUD2 1116 aa13.63□□□□□ -0.23
RTN3-203ENST00000341307 TACO1Q9BSH4 297 aaKnown RBP13.63□□□□□ -0.23
RTN3-203ENST00000341307 TNMDQ9H2S6 317 aa13.63□□□□□ -0.23
RTN3-203ENST00000341307 PDE11AQ9HCR9 933 aa13.63□□□□□ -0.23
RTN3-203ENST00000341307 PPFIA4O75335 1185 aa13.63□□□□□ -0.23
RTN3-203ENST00000341307 NEBLO76041 1014 aa13.63□□□□□ -0.23
RTN3-203ENST00000341307 ADRA2BP18089 450 aa13.63□□□□□ -0.23
RTN3-203ENST00000341307 RFX5P48382 616 aaPredicted RBP13.63□□□□□ -0.23
RTN3-203ENST00000341307 EIF5P55010 431 aaKnown RBP13.63□□□□□ -0.23
RTN3-203ENST00000341307 IQCB1Q15051 598 aa13.63□□□□□ -0.23
RTN3-203ENST00000341307 LMBR1LQ6UX01 489 aa13.63□□□□□ -0.23
RTN3-203ENST00000341307 NBPF5PQ86XG9 351 aaPredicted RBP13.63□□□□□ -0.23
RTN3-203ENST00000341307 CNTROBQ8N137 903 aa13.63□□□□□ -0.23
RTN3-203ENST00000341307 GPR161Q8N6U8 529 aaKnown RBP13.63□□□□□ -0.23
RTN3-203ENST00000341307 A1CFQ9NQ94 594 aaKnown RBP13.63□□□□□ -0.23
RTN3-203ENST00000341307 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
RTN3-203ENST00000341307 ATP6V1DQ9Y5K8 247 aa13.63□□□□□ -0.23
RTN3-203ENST00000341307 TTC41PQ6P2S7 1318 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 PHLPP2Q6ZVD8 1323 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 TTC36A6NLP5 189 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 N4BP1O75113 896 aaKnown RBP13.62□□□□□ -0.23
RTN3-203ENST00000341307 GLRX3O76003 335 aaKnown RBP13.62□□□□□ -0.23
RTN3-203ENST00000341307 ELF1P32519 619 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 ANAPC15P60006 121 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 PTPN12Q05209 780 aaKnown RBP13.62□□□□□ -0.23
RTN3-203ENST00000341307 ZC3H12AQ5D1E8 599 aaKnown RBP13.62□□□□□ -0.23
RTN3-203ENST00000341307 GBP6Q6ZN66 633 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 TTC6Q86TZ1 520 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 JPH2Q9BR39 696 aaPredicted RBP13.62□□□□□ -0.23
RTN3-203ENST00000341307 PARD6BQ9BYG5 372 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 DNAI1Q9UI46 699 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 FAN1Q9Y2M0 1017 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 USP42Q9H9J4 1324 aaKnown RBP13.62□□□□□ -0.23
RTN3-203ENST00000341307 PSDA5PKW4 1024 aaPredicted RBP13.62□□□□□ -0.23
RTN3-203ENST00000341307 APBA3O96018 575 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 LIG3P49916 1009 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 ETF1P62495 437 aaKnown RBP13.62□□□□□ -0.23
RTN3-203ENST00000341307 GIMAP7Q8NHV1 300 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 IL17RAQ96F46 866 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 SLC4A9Q96Q91 983 aa13.62□□□□□ -0.23
RTN3-203ENST00000341307 LRRFIP1Q32MZ4 808 aaKnown RBP13.61□□□□□ -0.23
RTN3-203ENST00000341307 CWC25Q9NXE8 425 aaPredicted RBP13.61□□□□□ -0.23
RTN3-203ENST00000341307 DACT1Q9NYF0 836 aa13.61□□□□□ -0.23
RTN3-203ENST00000341307 MCM8Q9UJA3 840 aa13.61□□□□□ -0.23
RTN3-203ENST00000341307 ITGB4P16144 1822 aa13.61□□□□□ -0.23
RTN3-203ENST00000341307 SOCS7O14512 581 aa13.61□□□□□ -0.23
RTN3-203ENST00000341307 USP8P40818 1118 aa13.61□□□□□ -0.23
RTN3-203ENST00000341307 IRX1P78414 480 aaPredicted RBP13.61□□□□□ -0.23
RTN3-203ENST00000341307 FOXO4P98177 505 aa13.61□□□□□ -0.23
RTN3-203ENST00000341307 SCRN1Q12765 414 aa13.61□□□□□ -0.23
RTN3-203ENST00000341307 TFCP2Q12800 502 aa13.61□□□□□ -0.23
RTN3-203ENST00000341307 RABL6Q3YEC7 729 aaPredicted RBP13.61□□□□□ -0.23
RTN3-203ENST00000341307 TRIM65Q6PJ69 517 aa13.61□□□□□ -0.23
RTN3-203ENST00000341307 BOLA2Q9H3K6 86 aa13.61□□□□□ -0.23
RTN3-203ENST00000341307 PARP3Q9Y6F1 533 aa13.61□□□□□ -0.23
RTN3-203ENST00000341307 NUP188Q5SRE5 1749 aa13.61□□□□□ -0.23
RTN3-203ENST00000341307 H7C1W4 665 aa13.6□□□□□ -0.23
RTN3-203ENST00000341307 MPHOSPH10O00566 681 aaKnown RBP13.6□□□□□ -0.23
RTN3-203ENST00000341307 TUBB4AP04350 444 aa13.6□□□□□ -0.23
RTN3-203ENST00000341307 GPTP24298 496 aa13.6□□□□□ -0.23
RTN3-203ENST00000341307 TBC1D8BQ0IIM8 1120 aa13.6□□□□□ -0.23
RTN3-203ENST00000341307 RSRC2Q7L4I2 434 aaKnown RBP13.6□□□□□ -0.23
RTN3-203ENST00000341307 TATDN2Q93075 761 aa13.6□□□□□ -0.23
RTN3-203ENST00000341307 MTMR6Q9Y217 621 aa13.6□□□□□ -0.23
RTN3-203ENST00000341307 NDUFB9Q9Y6M9 179 aa13.6□□□□□ -0.23
RTN3-203ENST00000341307 COPRSQ9NQ92 184 aa13.6□□□□□ -0.23
RTN3-203ENST00000341307 URI1O94763 535 aaPredicted RBP13.59□□□□□ -0.23
RTN3-203ENST00000341307 EZH2Q15910 746 aaKnown RBP13.59□□□□□ -0.23
RTN3-203ENST00000341307 EDC3Q96F86 508 aaKnown RBP13.59□□□□□ -0.23
RTN3-203ENST00000341307 GPATCH3Q96I76 525 aa13.59□□□□□ -0.23
RTN3-203ENST00000341307 CCDC85AQ96PX6 553 aaPredicted RBP13.59□□□□□ -0.23
RTN3-203ENST00000341307 CLSTN1O94985 981 aa13.59□□□□□ -0.23
RTN3-203ENST00000341307 CNNM3Q8NE01 707 aa13.59□□□□□ -0.23
RTN3-203ENST00000341307 ZNF594Q96JF6 807 aaPredicted RBP13.59□□□□□ -0.23
RTN3-203ENST00000341307 CLIC6Q96NY7 704 aa13.59□□□□□ -0.23
RTN3-203ENST00000341307 OSBPL5Q9H0X9 879 aaPredicted RBP13.59□□□□□ -0.23
RTN3-203ENST00000341307 CLSTN2Q9H4D0 955 aa13.59□□□□□ -0.23
RTN3-203ENST00000341307 BCL9O00512 1426 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms