RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 SCARF1Q14162 830 aa15.78■□□□□ 0.12
TRIM60-201ENST00000341062 FERMT3Q86UX7 667 aa15.78■□□□□ 0.12
TRIM60-201ENST00000341062 SP8Q8IXZ3 490 aa15.78■□□□□ 0.12
TRIM60-201ENST00000341062 CNKSR1Q969H4 720 aa15.78■□□□□ 0.12
TRIM60-201ENST00000341062 ZNF274Q96GC6 653 aaPredicted RBP15.78■□□□□ 0.12
TRIM60-201ENST00000341062 PIM2Q9P1W9 311 aa15.78■□□□□ 0.12
TRIM60-201ENST00000341062 ANKIB1Q9P2G1 1089 aa15.78■□□□□ 0.12
TRIM60-201ENST00000341062 DOCK2Q92608 1830 aa15.77■□□□□ 0.12
TRIM60-201ENST00000341062 COL4A5P29400 1685 aa15.77■□□□□ 0.12
TRIM60-201ENST00000341062 FOXP2O15409 715 aa15.77■□□□□ 0.11
TRIM60-201ENST00000341062 GYG1P46976 350 aa15.77■□□□□ 0.11
TRIM60-201ENST00000341062 RESTQ13127 1097 aa15.77■□□□□ 0.11
TRIM60-201ENST00000341062 NSUN7Q8NE18 718 aaKnown RBP15.77■□□□□ 0.11
TRIM60-201ENST00000341062 BCS1LQ9Y276 419 aa15.77■□□□□ 0.11
TRIM60-201ENST00000341062 KIF3AQ9Y496 699 aa15.77■□□□□ 0.11
TRIM60-201ENST00000341062 SALL1Q9NSC2 1324 aa15.76■□□□□ 0.11
TRIM60-201ENST00000341062 MCM5P33992 734 aa15.76■□□□□ 0.11
TRIM60-201ENST00000341062 ZAP70P43403 619 aa15.76■□□□□ 0.11
TRIM60-201ENST00000341062 BCAMP50895 628 aa15.76■□□□□ 0.11
TRIM60-201ENST00000341062 PRELPP51888 382 aa15.76■□□□□ 0.11
TRIM60-201ENST00000341062 NAA16Q6N069 864 aaPredicted RBP15.76■□□□□ 0.11
TRIM60-201ENST00000341062 PI16Q6UXB8 463 aa15.76■□□□□ 0.11
TRIM60-201ENST00000341062 TBC1D16Q8TBP0 767 aa15.76■□□□□ 0.11
TRIM60-201ENST00000341062 IQSEC3Q9UPP2 1182 aaPredicted RBP15.76■□□□□ 0.11
TRIM60-201ENST00000341062 FER1L6Q2WGJ9 1857 aa15.76■□□□□ 0.11
TRIM60-201ENST00000341062 UFL1O94874 794 aa15.76■□□□□ 0.11
TRIM60-201ENST00000341062 PHKA1P46020 1223 aa15.76■□□□□ 0.11
TRIM60-201ENST00000341062 TTF1Q15361 905 aaPredicted RBP15.76■□□□□ 0.11
TRIM60-201ENST00000341062 PUM3Q15397 648 aaKnown RBP15.76■□□□□ 0.11
TRIM60-201ENST00000341062 IMMTQ16891 758 aaKnown RBP15.76■□□□□ 0.11
TRIM60-201ENST00000341062 ZSCAN25Q6NSZ9 544 aa15.76■□□□□ 0.11
TRIM60-201ENST00000341062 LRRC2Q9BYS8 371 aa15.76■□□□□ 0.11
TRIM60-201ENST00000341062 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.76■□□□□ 0.11
TRIM60-201ENST00000341062 CCDC39Q9UFE4 941 aa15.76■□□□□ 0.11
TRIM60-201ENST00000341062 ARFGEF1Q9Y6D6 1849 aa15.75■□□□□ 0.11
TRIM60-201ENST00000341062 ZNF804BA4D1E1 1349 aa15.75■□□□□ 0.11
TRIM60-201ENST00000341062 WDR19Q8NEZ3 1342 aa15.75■□□□□ 0.11
TRIM60-201ENST00000341062 YBX3P16989 372 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRIM60-201ENST00000341062 MSNP26038 577 aaKnown RBP15.75■□□□□ 0.11
TRIM60-201ENST00000341062 MCAMP43121 646 aa15.75■□□□□ 0.11
TRIM60-201ENST00000341062 DALRD3Q5D0E6 543 aaKnown RBP15.75■□□□□ 0.11
TRIM60-201ENST00000341062 LEO1Q8WVC0 666 aaPredicted RBP15.75■□□□□ 0.11
TRIM60-201ENST00000341062 SPATA32Q96LK8 384 aa15.75■□□□□ 0.11
TRIM60-201ENST00000341062 CCDC88AQ3V6T2 1871 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 XDHP47989 1333 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 RIMBP2O15034 1052 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 CTDNEP1O95476 244 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 APOBRQ0VD83 1088 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 WASHC4Q2M389 1173 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 FAM173BQ6P4H8 233 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 COL1A1P02452 1464 aaPredicted RBP15.74■□□□□ 0.11
TRIM60-201ENST00000341062 SCN9AQ15858 1988 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 H3BQV1 296 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 FGAP02671 866 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 ARID4AP29374 1257 aaPredicted RBP15.74■□□□□ 0.11
TRIM60-201ENST00000341062 PDIA3P30101 505 aaKnown RBP15.74■□□□□ 0.11
TRIM60-201ENST00000341062 ADD2P35612 726 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 IFFO2Q5TF58 517 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 TTLL5Q6EMB2 1281 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 MPNDQ8N594 471 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 LPIN2Q92539 896 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 FAM84BQ96KN1 310 aaPredicted RBP15.74■□□□□ 0.11
TRIM60-201ENST00000341062 PUS7LQ9H0K6 701 aaKnown RBP15.74■□□□□ 0.11
TRIM60-201ENST00000341062 PODXL2Q9NZ53 605 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 JAG2Q9Y219 1238 aa15.74■□□□□ 0.11
TRIM60-201ENST00000341062 PTPDC1A2A3K4 754 aa15.73■□□□□ 0.11
TRIM60-201ENST00000341062 C6orf229H3BNL8 230 aa15.73■□□□□ 0.11
TRIM60-201ENST00000341062 ZNF500O60304 480 aaPredicted RBP15.73■□□□□ 0.11
TRIM60-201ENST00000341062 UQCRFS1P1P0C7P4 283 aa15.73■□□□□ 0.11
TRIM60-201ENST00000341062 RASSF7Q02833 373 aa15.73■□□□□ 0.11
TRIM60-201ENST00000341062 UBE3CQ15386 1083 aa15.73■□□□□ 0.11
TRIM60-201ENST00000341062 ATL3Q6DD88 541 aa15.73■□□□□ 0.11
TRIM60-201ENST00000341062 DPP8Q6V1X1 898 aaPredicted RBP15.73■□□□□ 0.11
TRIM60-201ENST00000341062 CFAP45Q9UL16 551 aa15.73■□□□□ 0.11
TRIM60-201ENST00000341062 ZKSCAN5Q9Y2L8 839 aa15.73■□□□□ 0.11
TRIM60-201ENST00000341062 NFKBIEO00221 500 aa15.72■□□□□ 0.11
TRIM60-201ENST00000341062 GPAA1O43292 621 aa15.72■□□□□ 0.11
TRIM60-201ENST00000341062 CCDC102BQ68D86 513 aa15.72■□□□□ 0.11
TRIM60-201ENST00000341062 GIMAP6Q6P9H5 292 aa15.72■□□□□ 0.11
TRIM60-201ENST00000341062 MB21D2Q8IYB1 491 aaPredicted RBP15.72■□□□□ 0.11
TRIM60-201ENST00000341062 DDX11Q96FC9 970 aa15.72■□□□□ 0.11
TRIM60-201ENST00000341062 ANKRD2Q9GZV1 360 aa15.72■□□□□ 0.11
TRIM60-201ENST00000341062 NUP62CLQ9H1M0 184 aa15.72■□□□□ 0.11
TRIM60-201ENST00000341062 KCNQ5Q9NR82 932 aa15.72■□□□□ 0.11
TRIM60-201ENST00000341062 DDX19AQ9NUU7 478 aaKnown RBP15.72■□□□□ 0.11
TRIM60-201ENST00000341062 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.72■□□□□ 0.11
TRIM60-201ENST00000341062 GGA1Q9UJY5 639 aa15.72■□□□□ 0.11
TRIM60-201ENST00000341062 UBE4AQ14139 1066 aa15.71■□□□□ 0.11
TRIM60-201ENST00000341062 RBM43Q6ZSC3 357 aaKnown RBP15.71■□□□□ 0.11
TRIM60-201ENST00000341062 ZNF277Q9NRM2 450 aaPredicted RBP15.71■□□□□ 0.11
TRIM60-201ENST00000341062 MYH13Q9UKX3 1938 aa15.71■□□□□ 0.11
TRIM60-201ENST00000341062 GOLGA6L4A6NEF3 574 aa15.71■□□□□ 0.11
TRIM60-201ENST00000341062 CCDC192P0DO97 292 aa15.71■□□□□ 0.11
TRIM60-201ENST00000341062 SLC5A1P13866 664 aa15.71■□□□□ 0.11
TRIM60-201ENST00000341062 LIG1P18858 919 aa15.71■□□□□ 0.11
TRIM60-201ENST00000341062 MAP3K11Q16584 847 aa15.71■□□□□ 0.11
TRIM60-201ENST00000341062 AOC3Q16853 763 aa15.71■□□□□ 0.11
TRIM60-201ENST00000341062 DOK7Q18PE1 504 aa15.71■□□□□ 0.11
TRIM60-201ENST00000341062 RGS22Q8NE09 1264 aa15.71■□□□□ 0.11
TRIM60-201ENST00000341062 NCOA7Q8NI08 942 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms