RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 UAP1Q16222 522 aaPredicted RBP12.81□□□□□ -0.36
TNC-201ENST00000341037 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 BRAPQ7Z569 592 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 TTC6Q86TZ1 520 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 PLEKHM2Q8IWE5 1019 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 STMN4Q9H169 189 aaPredicted RBP12.81□□□□□ -0.36
TNC-201ENST00000341037 ZHX1Q9UKY1 873 aaPredicted RBP12.81□□□□□ -0.36
TNC-201ENST00000341037 FAM169AQ9Y6X4 670 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 PRAG1Q86YV5 1406 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 A0A1W2PP64 1363 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 TIMM10P62072 90 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 WDR44Q5JSH3 913 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 TXNDC16Q9P2K2 825 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 ODF2LQ9ULJ1 636 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 ZBTB16Q05516 673 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 CFAP58Q5T655 872 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 G2E3Q7L622 706 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 RNF34Q969K3 372 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 USH1GQ495M9 461 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 SEL1L2Q5TEA6 688 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 NCAPH2Q6IBW4 605 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 GGA1Q9UJY5 639 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 ZNF518AQ6AHZ1 1483 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 PUM3Q15397 648 aaKnown RBP12.8□□□□□ -0.36
TNC-201ENST00000341037 UBLCP1Q8WVY7 318 aaPredicted RBP12.8□□□□□ -0.36
TNC-201ENST00000341037 NOC4LQ9BVI4 516 aaKnown RBP12.8□□□□□ -0.36
TNC-201ENST00000341037 TRAF5O00463 557 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 DYNC1I1O14576 645 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 SYT10Q6XYQ8 523 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 XAGE2Q96GT9 111 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 ARHGEF10LQ9HCE6 1279 aa12.8□□□□□ -0.36
TNC-201ENST00000341037 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
TNC-201ENST00000341037 TRPM2O94759 1503 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 C8orf34Q49A92 452 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 DCTPP1Q9H773 170 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 SH2D4AQ9H788 454 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 RPS6KB1P23443 525 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 PDE4DQ08499 809 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 TNNI3KQ59H18 835 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 STK32BQ9NY57 414 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 FPGT-TNNI3KV9GXZ4 949 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 SH3BP5O60239 455 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 FNBP4Q8N3X1 1017 aaPredicted RBP12.79□□□□□ -0.36
TNC-201ENST00000341037 IQUBQ8NA54 791 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 TSGA10Q9BZW7 698 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 MAPK8IP1Q9UQF2 711 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 CTTNBP2Q8WZ74 1663 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 TLDC2A0PJX2 215 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 MAP7D1Q3KQU3 841 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 PPP1R21Q6ZMI0 780 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 SNX21Q969T3 373 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 MRRFQ96E11 262 aaKnown RBP12.79□□□□□ -0.36
TNC-201ENST00000341037 C19orf44Q9H6X5 657 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 ELP1O95163 1332 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 TCP10Q12799 353 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 GPIHBP1Q8IV16 184 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 IP6K1Q92551 441 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 NOD1Q9Y239 953 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 ZFYVE9O95405 1425 aa12.79□□□□□ -0.36
TNC-201ENST00000341037 KRT222Q8N1A0 295 aa12.78□□□□□ -0.36
TNC-201ENST00000341037 FAM170AA1A519 330 aa12.78□□□□□ -0.36
TNC-201ENST00000341037 SLC27A2O14975 620 aa12.78□□□□□ -0.36
TNC-201ENST00000341037 NAP1L4Q99733 375 aaKnown RBP12.78□□□□□ -0.36
TNC-201ENST00000341037 VPS18Q9P253 973 aa12.78□□□□□ -0.36
TNC-201ENST00000341037 GINS2Q9Y248 185 aa12.78□□□□□ -0.36
TNC-201ENST00000341037 TXKP42681 527 aa12.78□□□□□ -0.36
TNC-201ENST00000341037 PLBD2Q8NHP8 589 aa12.78□□□□□ -0.36
TNC-201ENST00000341037 UGGT2Q9NYU1 1516 aa12.78□□□□□ -0.36
TNC-201ENST00000341037 SNX16P57768 344 aa12.78□□□□□ -0.36
TNC-201ENST00000341037 SPATA24Q86W54 205 aa12.78□□□□□ -0.36
TNC-201ENST00000341037 CCDC117Q8IWD4 279 aaPredicted RBP12.78□□□□□ -0.36
TNC-201ENST00000341037 TBC1D7Q9P0N9 293 aa12.78□□□□□ -0.36
TNC-201ENST00000341037 ATP2A2P16615 1042 aaKnown RBP12.78□□□□□ -0.36
TNC-201ENST00000341037 RPL13P26373 211 aaKnown RBP12.78□□□□□ -0.36
TNC-201ENST00000341037 LUC7L2Q9Y383 392 aaKnown RBP12.78□□□□□ -0.36
TNC-201ENST00000341037 NDUFB9Q9Y6M9 179 aa12.78□□□□□ -0.36
TNC-201ENST00000341037 PRDM1O75626 825 aa12.77□□□□□ -0.36
TNC-201ENST00000341037 RNASE9P60153 205 aaKnown RBP12.77□□□□□ -0.36
TNC-201ENST00000341037 STRN3Q13033 797 aa12.77□□□□□ -0.36
TNC-201ENST00000341037 ANKS4BQ8N8V4 417 aa12.77□□□□□ -0.36
TNC-201ENST00000341037 VPS16Q9H269 839 aa12.77□□□□□ -0.36
TNC-201ENST00000341037 NCOA5Q9HCD5 579 aaKnown RBP12.77□□□□□ -0.36
TNC-201ENST00000341037 CCDC160A6NGH7 325 aa12.77□□□□□ -0.36
TNC-201ENST00000341037 CALUO43852 315 aaPredicted RBP12.77□□□□□ -0.36
TNC-201ENST00000341037 CFAP157Q5JU67 520 aa12.77□□□□□ -0.36
TNC-201ENST00000341037 LEO1Q8WVC0 666 aaPredicted RBP12.77□□□□□ -0.36
TNC-201ENST00000341037 KIFAP3Q92845 792 aa12.77□□□□□ -0.36
TNC-201ENST00000341037 KIFC2Q96AC6 838 aa12.77□□□□□ -0.36
TNC-201ENST00000341037 SMC6Q96SB8 1091 aa12.77□□□□□ -0.36
TNC-201ENST00000341037 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.37
TNC-201ENST00000341037 NOP56O00567 594 aaKnown RBP12.77□□□□□ -0.37
TNC-201ENST00000341037 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.37
TNC-201ENST00000341037 SEC62Q99442 399 aaKnown RBP12.77□□□□□ -0.37
TNC-201ENST00000341037 METTL22Q9BUU2 404 aaPredicted RBP12.77□□□□□ -0.37
TNC-201ENST00000341037 PDE8AO60658 829 aa12.77□□□□□ -0.37
TNC-201ENST00000341037 SLU7O95391 586 aaKnown RBP12.77□□□□□ -0.37
TNC-201ENST00000341037 MYL10Q9BUA6 226 aa12.77□□□□□ -0.37
TNC-201ENST00000341037 USP26Q9BXU7 913 aa12.77□□□□□ -0.37
TNC-201ENST00000341037 RAD50Q92878 1312 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms