RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 SYT10Q6XYQ8 523 aa21.94■■□□□ 1.1
CDK13-202ENST00000340829 GOPCQ9HD26 462 aa21.94■■□□□ 1.1
CDK13-202ENST00000340829 HECW2Q9P2P5 1572 aa21.94■■□□□ 1.1
CDK13-202ENST00000340829 GNA11P29992 359 aa21.94■■□□□ 1.1
CDK13-202ENST00000340829 C17orf53Q8N3J3 647 aaPredicted RBP21.94■■□□□ 1.1
CDK13-202ENST00000340829 LZTFL1Q9NQ48 299 aa21.94■■□□□ 1.1
CDK13-202ENST00000340829 TRPM1Q7Z4N2 1603 aa21.94■■□□□ 1.1
CDK13-202ENST00000340829 ANKRD62A6NC57 917 aa21.94■■□□□ 1.1
CDK13-202ENST00000340829 UBXN1Q04323 297 aa21.94■■□□□ 1.1
CDK13-202ENST00000340829 TFCP2L1Q9NZI6 479 aa21.94■■□□□ 1.1
CDK13-202ENST00000340829 TET3O43151 1660 aa21.93■■□□□ 1.1
CDK13-202ENST00000340829 NLRP1Q9C000 1473 aa21.93■■□□□ 1.1
CDK13-202ENST00000340829 LRRC24Q50LG9 513 aa21.93■■□□□ 1.1
CDK13-202ENST00000340829 KRT40Q6A162 431 aa21.93■■□□□ 1.1
CDK13-202ENST00000340829 SCLT1Q96NL6 688 aa21.93■■□□□ 1.1
CDK13-202ENST00000340829 NAA15Q9BXJ9 866 aaKnown RBP21.93■■□□□ 1.1
CDK13-202ENST00000340829 TRAPPC3LQ5T215 181 aa21.93■■□□□ 1.1
CDK13-202ENST00000340829 CDCA7Q9BWT1 371 aaPredicted RBP21.93■■□□□ 1.1
CDK13-202ENST00000340829 IFFO1Q0D2I5 559 aa21.93■■□□□ 1.1
CDK13-202ENST00000340829 TEX11Q8IYF3 940 aa21.93■■□□□ 1.1
CDK13-202ENST00000340829 CNBD1Q8NA66 436 aa21.93■■□□□ 1.1
CDK13-202ENST00000340829 SMARCC2Q8TAQ2 1214 aa21.93■■□□□ 1.1
CDK13-202ENST00000340829 ZSWIM6Q9HCJ5 1215 aa21.93■■□□□ 1.1
CDK13-202ENST00000340829 RASEFQ8IZ41 740 aa21.93■■□□□ 1.1
CDK13-202ENST00000340829 AATFQ9NY61 560 aaKnown RBP eCLIP21.93■■□□□ 1.1
CDK13-202ENST00000340829 CCNL1Q9UK58 526 aaPredicted RBP21.93■■□□□ 1.1
CDK13-202ENST00000340829 CTAGE15A4D2H0 777 aa21.92■■□□□ 1.1
CDK13-202ENST00000340829 CTAGE8P0CG41 777 aa21.92■■□□□ 1.1
CDK13-202ENST00000340829 CTAGE6Q86UF2 777 aa21.92■■□□□ 1.1
CDK13-202ENST00000340829 CTAGE4Q8IX94 777 aa21.92■■□□□ 1.1
CDK13-202ENST00000340829 IBSPP21815 317 aaPredicted RBP21.92■■□□□ 1.1
CDK13-202ENST00000340829 ADCY10Q96PN6 1610 aa21.92■■□□□ 1.1
CDK13-202ENST00000340829 GTF2F1P35269 517 aaKnown RBP eCLIP21.92■■□□□ 1.1
CDK13-202ENST00000340829 LETM2Q2VYF4 491 aa21.92■■□□□ 1.1
CDK13-202ENST00000340829 PIK3AP1Q6ZUJ8 805 aa21.92■■□□□ 1.1
CDK13-202ENST00000340829 CTNNBL1Q8WYA6 563 aaPredicted RBP21.92■■□□□ 1.1
CDK13-202ENST00000340829 OSBPL3Q9H4L5 887 aa21.92■■□□□ 1.1
CDK13-202ENST00000340829 TLR7Q9NYK1 1049 aaKnown RBP21.92■■□□□ 1.1
CDK13-202ENST00000340829 LMTK3Q96Q04 1460 aa21.92■■□□□ 1.1
CDK13-202ENST00000340829 ABCC3O15438 1527 aa21.92■■□□□ 1.1
CDK13-202ENST00000340829 ARHGEF25Q86VW2 580 aa21.91■■□□□ 1.1
CDK13-202ENST00000340829 ZNF202O95125 648 aa21.91■■□□□ 1.1
CDK13-202ENST00000340829 LSG1Q9H089 658 aaKnown RBP21.91■■□□□ 1.1
CDK13-202ENST00000340829 BCCIPQ9P287 314 aaKnown RBP eCLIP21.91■■□□□ 1.1
CDK13-202ENST00000340829 POLR2DO15514 142 aaKnown RBP21.91■■□□□ 1.1
CDK13-202ENST00000340829 MROH5Q6ZUA9 1318 aa21.91■■□□□ 1.1
CDK13-202ENST00000340829 CLTCL1P53675 1640 aa21.91■■□□□ 1.1
CDK13-202ENST00000340829 PARP1P09874 1014 aaKnown RBP21.91■■□□□ 1.1
CDK13-202ENST00000340829 SHTN1A0MZ66 631 aa21.9■■□□□ 1.1
CDK13-202ENST00000340829 UFL1O94874 794 aa21.9■■□□□ 1.1
CDK13-202ENST00000340829 PAF1Q8N7H5 531 aa21.9■■□□□ 1.1
CDK13-202ENST00000340829 KCNJ14Q9UNX9 436 aa21.9■■□□□ 1.1
CDK13-202ENST00000340829 MTMR6Q9Y217 621 aa21.9■■□□□ 1.1
CDK13-202ENST00000340829 CTR9Q6PD62 1173 aa21.9■■□□□ 1.1
CDK13-202ENST00000340829 HAUS7Q99871 368 aa21.9■■□□□ 1.1
CDK13-202ENST00000340829 ZNF75DP51815 510 aa21.9■■□□□ 1.1
CDK13-202ENST00000340829 CTSWP56202 376 aa21.9■■□□□ 1.1
CDK13-202ENST00000340829 ADCK5Q3MIX3 580 aa21.9■■□□□ 1.1
CDK13-202ENST00000340829 ARID5AQ03989 594 aa21.9■■□□□ 1.1
CDK13-202ENST00000340829 CCT6AP40227 531 aaKnown RBP21.89■■□□□ 1.1
CDK13-202ENST00000340829 OGFOD1Q8N543 542 aa21.89■■□□□ 1.1
CDK13-202ENST00000340829 hCG_1642624A0A1W2PR95 340 aa21.89■■□□□ 1.1
CDK13-202ENST00000340829 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.89■■□□□ 1.1
CDK13-202ENST00000340829 ARFGAP3Q9NP61 516 aa21.89■■□□□ 1.1
CDK13-202ENST00000340829 SPDYE3A6NKU9 549 aa21.89■■□□□ 1.09
CDK13-202ENST00000340829 HSPD1P10809 573 aaKnown RBP21.89■■□□□ 1.09
CDK13-202ENST00000340829 KRT222Q8N1A0 295 aa21.89■■□□□ 1.09
CDK13-202ENST00000340829 CDK12Q9NYV4 1490 aaPredicted RBP21.89■■□□□ 1.09
CDK13-202ENST00000340829 CTAGE9A4FU28 777 aa21.89■■□□□ 1.09
CDK13-202ENST00000340829 DESP17661 470 aa21.89■■□□□ 1.09
CDK13-202ENST00000340829 TTLL12Q14166 644 aaPredicted RBP21.89■■□□□ 1.09
CDK13-202ENST00000340829 DHX37Q8IY37 1157 aaKnown RBP21.89■■□□□ 1.09
CDK13-202ENST00000340829 RGS12O14924 1447 aa21.89■■□□□ 1.09
CDK13-202ENST00000340829 GPT2Q8TD30 523 aa21.88■■□□□ 1.09
CDK13-202ENST00000340829 GUCA1BQ9UMX6 200 aa21.88■■□□□ 1.09
CDK13-202ENST00000340829 MAP3K4Q9Y6R4 1608 aa21.88■■□□□ 1.09
CDK13-202ENST00000340829 GSTTP1A0A1W2PQM5 241 aa21.88■■□□□ 1.09
CDK13-202ENST00000340829 CUTAO60888 179 aa21.88■■□□□ 1.09
CDK13-202ENST00000340829 DBNLQ9UJU6 430 aaKnown RBP21.88■■□□□ 1.09
CDK13-202ENST00000340829 DYDC1Q8WWB3 177 aa21.88■■□□□ 1.09
CDK13-202ENST00000340829 WWC3Q9ULE0 1092 aa21.88■■□□□ 1.09
CDK13-202ENST00000340829 BICDL2A1A5D9 508 aa21.88■■□□□ 1.09
CDK13-202ENST00000340829 FAM98CQ17RN3 349 aaKnown RBP21.88■■□□□ 1.09
CDK13-202ENST00000340829 CCDC42Q96M95 316 aa21.88■■□□□ 1.09
CDK13-202ENST00000340829 COPRSQ9NQ92 184 aa21.88■■□□□ 1.09
CDK13-202ENST00000340829 TTC6Q86TZ1 520 aa21.87■■□□□ 1.09
CDK13-202ENST00000340829 TUBB4AP04350 444 aa21.87■■□□□ 1.09
CDK13-202ENST00000340829 EIF6P56537 245 aaKnown RBP21.87■■□□□ 1.09
CDK13-202ENST00000340829 CKAP4Q07065 602 aaKnown RBP21.87■■□□□ 1.09
CDK13-202ENST00000340829 MCM6Q14566 821 aa21.87■■□□□ 1.09
CDK13-202ENST00000340829 BAG1Q99933 345 aaPredicted RBP21.87■■□□□ 1.09
CDK13-202ENST00000340829 VEZTQ9HBM0 779 aa21.87■■□□□ 1.09
CDK13-202ENST00000340829 CTNND2Q9UQB3 1225 aa21.87■■□□□ 1.09
CDK13-202ENST00000340829 MAPK8IP1Q9UQF2 711 aa21.87■■□□□ 1.09
CDK13-202ENST00000340829 LMAN1P49257 510 aa21.87■■□□□ 1.09
CDK13-202ENST00000340829 TRERF1Q96PN7 1200 aa21.87■■□□□ 1.09
CDK13-202ENST00000340829 SRRTQ9BXP5 876 aaKnown RBP21.87■■□□□ 1.09
CDK13-202ENST00000340829 HDAC9Q9UKV0 1011 aa21.87■■□□□ 1.09
CDK13-202ENST00000340829 FANCCQ00597 558 aa21.86■■□□□ 1.09
CDK13-202ENST00000340829 ZNF569Q5MCW4 686 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms