RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 MANSC4A6NHS7 340 aaPredicted RBP18.94■□□□□ 0.62
VAPA-201ENST00000340541 GPR25O00155 361 aa18.94■□□□□ 0.62
VAPA-201ENST00000340541 PRKG1Q13976 671 aa18.94■□□□□ 0.62
VAPA-201ENST00000340541 APOBEC3HQ6NTF7 200 aaKnown RBP18.94■□□□□ 0.62
VAPA-201ENST00000340541 HHIPL2Q6UWX4 724 aa18.94■□□□□ 0.62
VAPA-201ENST00000340541 PI16Q6UXB8 463 aa18.94■□□□□ 0.62
VAPA-201ENST00000340541 TLR7Q9NYK1 1049 aaKnown RBP18.94■□□□□ 0.62
VAPA-201ENST00000340541 DBNLQ9UJU6 430 aaKnown RBP18.94■□□□□ 0.62
VAPA-201ENST00000340541 HMMRO75330 724 aa18.93■□□□□ 0.62
VAPA-201ENST00000340541 MCAMP43121 646 aa18.93■□□□□ 0.62
VAPA-201ENST00000340541 DIXDC1Q155Q3 683 aa18.93■□□□□ 0.62
VAPA-201ENST00000340541 GORABQ5T7V8 394 aa18.93■□□□□ 0.62
VAPA-201ENST00000340541 ERC1Q8IUD2 1116 aa18.93■□□□□ 0.62
VAPA-201ENST00000340541 SSC5DA1L4H1 1573 aa18.93■□□□□ 0.62
VAPA-201ENST00000340541 LDHBP07195 334 aaKnown RBP18.92■□□□□ 0.62
VAPA-201ENST00000340541 TNFAIP1Q13829 316 aa18.92■□□□□ 0.62
VAPA-201ENST00000340541 HSP90AB4PQ58FF6 505 aa18.92■□□□□ 0.62
VAPA-201ENST00000340541 SPATA5Q8NB90 893 aa18.92■□□□□ 0.62
VAPA-201ENST00000340541 RHPN1Q8TCX5 695 aa18.92■□□□□ 0.62
VAPA-201ENST00000340541 VEZTQ9HBM0 779 aa18.92■□□□□ 0.62
VAPA-201ENST00000340541 FKTNO75072 461 aa18.91■□□□□ 0.62
VAPA-201ENST00000340541 UQCRFS1P1P0C7P4 283 aa18.91■□□□□ 0.62
VAPA-201ENST00000340541 IREB2P48200 963 aaKnown RBP18.91■□□□□ 0.62
VAPA-201ENST00000340541 ZGPATQ8N5A5 531 aaKnown RBP18.91■□□□□ 0.62
VAPA-201ENST00000340541 ZNF512BQ96KM6 892 aaPredicted RBP18.91■□□□□ 0.62
VAPA-201ENST00000340541 CCDC8Q9H0W5 538 aaPredicted RBP18.91■□□□□ 0.62
VAPA-201ENST00000340541 HPS5Q9UPZ3 1129 aa18.91■□□□□ 0.62
VAPA-201ENST00000340541 DAGLAQ9Y4D2 1042 aa18.91■□□□□ 0.62
VAPA-201ENST00000340541 MYH2Q9UKX2 1941 aa18.9■□□□□ 0.62
VAPA-201ENST00000340541 MKRN3Q13064 507 aaKnown RBP18.9■□□□□ 0.62
VAPA-201ENST00000340541 RASA3Q14644 834 aa18.9■□□□□ 0.62
VAPA-201ENST00000340541 ZNF384Q8TF68 577 aa18.9■□□□□ 0.62
VAPA-201ENST00000340541 IL1RAPL2Q9NP60 686 aa18.9■□□□□ 0.62
VAPA-201ENST00000340541 USP2O75604 605 aaPredicted RBP18.89■□□□□ 0.61
VAPA-201ENST00000340541 CACNB3P54284 484 aa18.89■□□□□ 0.61
VAPA-201ENST00000340541 CCDC158Q5M9N0 1113 aa18.89■□□□□ 0.61
VAPA-201ENST00000340541 NBPF12Q5TAG4 269 aaPredicted RBP18.89■□□□□ 0.61
VAPA-201ENST00000340541 FBXO46Q6PJ61 603 aaPredicted RBP18.89■□□□□ 0.61
VAPA-201ENST00000340541 TBC1D9Q6ZT07 1266 aa18.89■□□□□ 0.61
VAPA-201ENST00000340541 IFNL1Q8IU54 200 aa18.89■□□□□ 0.61
VAPA-201ENST00000340541 ANKRD13AQ8IZ07 590 aa18.89■□□□□ 0.61
VAPA-201ENST00000340541 WNK4Q96J92 1243 aa18.89■□□□□ 0.61
VAPA-201ENST00000340541 TEPSINQ96N21 525 aa18.89■□□□□ 0.61
VAPA-201ENST00000340541 ABCF2Q9UG63 623 aa18.89■□□□□ 0.61
VAPA-201ENST00000340541 RAB11FIP3O75154 756 aa18.88■□□□□ 0.61
VAPA-201ENST00000340541 TTC39AQ5SRH9 613 aa18.88■□□□□ 0.61
VAPA-201ENST00000340541 OTUD7BQ6GQQ9 843 aa18.88■□□□□ 0.61
VAPA-201ENST00000340541 AACSQ86V21 672 aa18.88■□□□□ 0.61
VAPA-201ENST00000340541 CDAN1Q8IWY9 1227 aa18.88■□□□□ 0.61
VAPA-201ENST00000340541 KIF1BPQ96EK5 621 aa18.88■□□□□ 0.61
VAPA-201ENST00000340541 CRBNQ96SW2 442 aa18.88■□□□□ 0.61
VAPA-201ENST00000340541 PCDHB15Q9Y5E8 787 aa18.88■□□□□ 0.61
VAPA-201ENST00000340541 GAKO14976 1311 aa18.88■□□□□ 0.61
VAPA-201ENST00000340541 TCP10L2B9ZVM9 353 aa18.87■□□□□ 0.61
VAPA-201ENST00000340541 APBB1O00213 710 aa18.87■□□□□ 0.61
VAPA-201ENST00000340541 FKBP1CQ5VVH2 108 aa18.87■□□□□ 0.61
VAPA-201ENST00000340541 SPTY2D1Q68D10 685 aaPredicted RBP18.87■□□□□ 0.61
VAPA-201ENST00000340541 CDC42EP5Q6NZY7 148 aa18.87■□□□□ 0.61
VAPA-201ENST00000340541 FAM163AQ96GL9 167 aaPredicted RBP18.87■□□□□ 0.61
VAPA-201ENST00000340541 CLMNQ96JQ2 1002 aa18.87■□□□□ 0.61
VAPA-201ENST00000340541 SNRKQ9NRH2 765 aa18.87■□□□□ 0.61
VAPA-201ENST00000340541 FZD1Q9UP38 647 aa18.87■□□□□ 0.61
VAPA-201ENST00000340541 MYO5AQ9Y4I1 1855 aaKnown RBP18.87■□□□□ 0.61
VAPA-201ENST00000340541 LAMB1P07942 1786 aa18.86■□□□□ 0.61
VAPA-201ENST00000340541 TNRC18O15417 2968 aaPredicted RBP18.86■□□□□ 0.61
VAPA-201ENST00000340541 CYP2E1P05181 493 aaPredicted RBP18.86■□□□□ 0.61
VAPA-201ENST00000340541 TNNI2P48788 182 aa18.86■□□□□ 0.61
VAPA-201ENST00000340541 SOX10P56693 466 aa18.86■□□□□ 0.61
VAPA-201ENST00000340541 MECOMQ03112 1051 aa18.86■□□□□ 0.61
VAPA-201ENST00000340541 ERICH6Q7L0X2 663 aa18.86■□□□□ 0.61
VAPA-201ENST00000340541 DZIP1Q86YF9 867 aaKnown RBP18.86■□□□□ 0.61
VAPA-201ENST00000340541 TMEM39BQ9GZU3 492 aa18.86■□□□□ 0.61
VAPA-201ENST00000340541 TESPA1A2RU30 521 aaPredicted RBP18.85■□□□□ 0.61
VAPA-201ENST00000340541 SLC34A2O95436 690 aa18.85■□□□□ 0.61
VAPA-201ENST00000340541 FAM83AQ86UY5 434 aa18.85■□□□□ 0.61
VAPA-201ENST00000340541 CLASRPQ8N2M8 674 aaKnown RBP18.85■□□□□ 0.61
VAPA-201ENST00000340541 NSUN4Q96CB9 384 aaKnown RBP18.85■□□□□ 0.61
VAPA-201ENST00000340541 R3HDMLQ9H3Y0 253 aa18.85■□□□□ 0.61
VAPA-201ENST00000340541 MAST2Q6P0Q8 1798 aa18.85■□□□□ 0.61
VAPA-201ENST00000340541 RFX7Q2KHR2 1363 aa18.84■□□□□ 0.61
VAPA-201ENST00000340541 ZAP70P43403 619 aa18.84■□□□□ 0.61
VAPA-201ENST00000340541 DCTPP1Q9H773 170 aa18.84■□□□□ 0.61
VAPA-201ENST00000340541 MROH7-TTC4A0A0A0MT08 1334 aa18.83■□□□□ 0.61
VAPA-201ENST00000340541 IGF2BP3O00425 579 aaKnown RBP eCLIP18.83■□□□□ 0.6
VAPA-201ENST00000340541 NFIAQ12857 509 aa18.83■□□□□ 0.6
VAPA-201ENST00000340541 PIH1D3Q9NQM4 214 aaKnown RBP18.83■□□□□ 0.6
VAPA-201ENST00000340541 TMOD2Q9NZR1 351 aa18.83■□□□□ 0.6
VAPA-201ENST00000340541 OTOFQ9HC10 1997 aa18.82■□□□□ 0.6
VAPA-201ENST00000340541 RPAP1Q9BWH6 1393 aaPredicted RBP18.82■□□□□ 0.6
VAPA-201ENST00000340541 DOCK2Q92608 1830 aa18.82■□□□□ 0.6
VAPA-201ENST00000340541 GPR75-ASB3A0A0A6YYF3 556 aa18.82■□□□□ 0.6
VAPA-201ENST00000340541 SLF2Q8IX21 1173 aa18.82■□□□□ 0.6
VAPA-201ENST00000340541 USP40Q9NVE5 1235 aa18.82■□□□□ 0.6
VAPA-201ENST00000340541 RAI14Q9P0K7 980 aa18.82■□□□□ 0.6
VAPA-201ENST00000340541 FAM198AQ9UFP1 575 aa18.82■□□□□ 0.6
VAPA-201ENST00000340541 NDUFB9Q9Y6M9 179 aa18.82■□□□□ 0.6
VAPA-201ENST00000340541 GJA5P36382 358 aa18.81■□□□□ 0.6
VAPA-201ENST00000340541 BTDP43251 543 aa18.81■□□□□ 0.6
VAPA-201ENST00000340541 MAP3K9P80192 1104 aa18.81■□□□□ 0.6
VAPA-201ENST00000340541 HOOK2Q96ED9 719 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms