RNA–Protein interactions for RNA: ENST00000340433.3

RTL4-201, Transcript of retrotransposon Gag like 4, humanhuman

APPRIS P1 BASIC

Gene RTL4, Length 2,613 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4-201ENST00000340433 SBF1O95248 1867 aa3.35□□□□□ -1.87
RTL4-201ENST00000340433 TOMM70O94826 608 aa3.34□□□□□ -1.87
RTL4-201ENST00000340433 CTSOP43234 321 aaPredicted RBP3.34□□□□□ -1.87
RTL4-201ENST00000340433 GSK3AP49840 483 aa3.34□□□□□ -1.87
RTL4-201ENST00000340433 EPHA4P54764 986 aa3.34□□□□□ -1.87
RTL4-201ENST00000340433 CABP4P57796 275 aa3.34□□□□□ -1.87
RTL4-201ENST00000340433 CC2D1BQ5T0F9 858 aaKnown RBP3.34□□□□□ -1.87
RTL4-201ENST00000340433 TRIM46Q7Z4K8 759 aa3.34□□□□□ -1.87
RTL4-201ENST00000340433 PIGBQ92521 554 aa3.34□□□□□ -1.87
RTL4-201ENST00000340433 CLP1Q92989 425 aaKnown RBP3.34□□□□□ -1.87
RTL4-201ENST00000340433 DCAF5Q96JK2 942 aa3.34□□□□□ -1.87
RTL4-201ENST00000340433 SLC4A9Q96Q91 983 aa3.34□□□□□ -1.87
RTL4-201ENST00000340433 HRH3Q9Y5N1 445 aa3.34□□□□□ -1.87
RTL4-201ENST00000340433 USP3Q9Y6I4 520 aa3.34□□□□□ -1.87
RTL4-201ENST00000340433 KDM6AO15550 1401 aaPredicted RBP3.34□□□□□ -1.88
RTL4-201ENST00000340433 LOC102724428A0A0B4J2F2 783 aa3.34□□□□□ -1.88
RTL4-201ENST00000340433 ERVV-2B6SEH9 535 aa3.34□□□□□ -1.88
RTL4-201ENST00000340433 SPINT1O43278 529 aa3.34□□□□□ -1.88
RTL4-201ENST00000340433 ATP2B4P23634 1241 aa3.34□□□□□ -1.88
RTL4-201ENST00000340433 MTHFSP49914 203 aa3.34□□□□□ -1.88
RTL4-201ENST00000340433 SIK1P57059 783 aa3.34□□□□□ -1.88
RTL4-201ENST00000340433 CNGB1Q14028 1251 aaPredicted RBP3.34□□□□□ -1.88
RTL4-201ENST00000340433 GPR162Q16538 588 aa3.34□□□□□ -1.88
RTL4-201ENST00000340433 SULT6B1Q6IMI4 303 aa3.34□□□□□ -1.88
RTL4-201ENST00000340433 SCG3Q8WXD2 468 aaKnown RBP3.34□□□□□ -1.88
RTL4-201ENST00000340433 ATP13A2Q9NQ11 1180 aa3.34□□□□□ -1.88
RTL4-201ENST00000340433 PRDM10Q9NQV6 1147 aa3.34□□□□□ -1.88
RTL4-201ENST00000340433 DNMT3AQ9Y6K1 912 aaPredicted RBP3.34□□□□□ -1.88
RTL4-201ENST00000340433 ITGB4P16144 1822 aa3.34□□□□□ -1.88
RTL4-201ENST00000340433 DLEC1Q9Y238 1755 aa3.34□□□□□ -1.88
RTL4-201ENST00000340433 DIAPH1O60610 1272 aaKnown RBP3.33□□□□□ -1.88
RTL4-201ENST00000340433 SSFA2P28290 1259 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 SCARF1Q14162 830 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 MTFR1Q15390 333 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 OCLNQ16625 522 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 MSL1Q68DK7 614 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 PHLDB3Q6NSJ2 640 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 COL23A1Q86Y22 540 aaPredicted RBP3.33□□□□□ -1.88
RTL4-201ENST00000340433 SLC9A9Q8IVB4 645 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 CFAP53Q96M91 514 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 ZFP42Q96MM3 310 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 CXXC1Q9P0U4 656 aaPredicted RBP3.33□□□□□ -1.88
RTL4-201ENST00000340433 SCHIP1Q9P0W5 487 aaPredicted RBP3.33□□□□□ -1.88
RTL4-201ENST00000340433 ASAP1Q9ULH1 1129 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 DICER1Q9UPY3 1922 aaKnown RBP3.33□□□□□ -1.88
RTL4-201ENST00000340433 C21orf2O43822 256 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 HMGB1P09429 215 aaKnown RBP3.33□□□□□ -1.88
RTL4-201ENST00000340433 YBX3P16989 372 aaKnown RBP eCLIP3.33□□□□□ -1.88
RTL4-201ENST00000340433 IL13P35225 146 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 TMEM214Q6NUQ4 689 aaKnown RBP3.33□□□□□ -1.88
RTL4-201ENST00000340433 MRRFQ96E11 262 aaKnown RBP3.33□□□□□ -1.88
RTL4-201ENST00000340433 ZSCAN10Q96SZ4 725 aaPredicted RBP3.33□□□□□ -1.88
RTL4-201ENST00000340433 MKNK1Q9BUB5 465 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 ATG3Q9NT62 314 aa3.33□□□□□ -1.88
RTL4-201ENST00000340433 C4BP0C0L5 1744 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 FIGNL2A6NMB9 653 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 CDK2AP1O14519 115 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 U2SURPO15042 1029 aaKnown RBP3.32□□□□□ -1.88
RTL4-201ENST00000340433 PPP1R12BO60237 982 aaPredicted RBP3.32□□□□□ -1.88
RTL4-201ENST00000340433 BRD1O95696 1058 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 HMOX1P09601 288 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 SNRPBP14678 240 aaKnown RBP3.32□□□□□ -1.88
RTL4-201ENST00000340433 WEE1P30291 646 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 RNF144AP50876 292 aaPredicted RBP3.32□□□□□ -1.88
RTL4-201ENST00000340433 FKBP5Q13451 457 aaPredicted RBP3.32□□□□□ -1.88
RTL4-201ENST00000340433 AKAP4Q5JQC9 854 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 GIMAP6Q6P9H5 292 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 PRICKLE2Q7Z3G6 844 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 LINC00116Q8NCU8 138 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 GRIP2Q9C0E4 1043 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 IQSEC3Q9UPP2 1182 aaPredicted RBP3.32□□□□□ -1.88
RTL4-201ENST00000340433 RTCBQ9Y3I0 505 aaKnown RBP3.32□□□□□ -1.88
RTL4-201ENST00000340433 PARP3Q9Y6F1 533 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 NPC1L1Q9UHC9 1359 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 IGFBP4P22692 258 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 PHKA2P46019 1235 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 TRAPPC3LQ5T215 181 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 CAPN12Q6ZSI9 719 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 RNF217Q8TC41 542 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 NUDCQ9Y266 331 aa3.32□□□□□ -1.88
RTL4-201ENST00000340433 KDRP35968 1356 aa3.31□□□□□ -1.88
RTL4-201ENST00000340433 TTLL8A6PVC2 850 aa3.31□□□□□ -1.88
RTL4-201ENST00000340433 PTCD1O75127 700 aaKnown RBP3.31□□□□□ -1.88
RTL4-201ENST00000340433 GTF2E1P29083 439 aaPredicted RBP3.31□□□□□ -1.88
RTL4-201ENST00000340433 GPC1P35052 558 aa3.31□□□□□ -1.88
RTL4-201ENST00000340433 RFC4P35249 363 aa3.31□□□□□ -1.88
RTL4-201ENST00000340433 ITPK1Q13572 414 aa3.31□□□□□ -1.88
RTL4-201ENST00000340433 COL13A1Q5TAT6 717 aaPredicted RBP3.31□□□□□ -1.88
RTL4-201ENST00000340433 SH3PXD2AQ5TCZ1 1133 aa3.31□□□□□ -1.88
RTL4-201ENST00000340433 B4GALNT3Q6L9W6 998 aa3.31□□□□□ -1.88
RTL4-201ENST00000340433 CNTNAP4Q9C0A0 1308 aa3.31□□□□□ -1.88
RTL4-201ENST00000340433 H3BM21 787 aa3.31□□□□□ -1.88
RTL4-201ENST00000340433 RNMTO43148 476 aaKnown RBP3.31□□□□□ -1.88
RTL4-201ENST00000340433 RPS6KA4O75676 772 aa3.31□□□□□ -1.88
RTL4-201ENST00000340433 NEFMP07197 916 aa3.31□□□□□ -1.88
RTL4-201ENST00000340433 RHOQP17081 205 aa3.31□□□□□ -1.88
RTL4-201ENST00000340433 POU4F2Q12837 409 aa3.31□□□□□ -1.88
RTL4-201ENST00000340433 NAA30Q147X3 362 aaPredicted RBP3.31□□□□□ -1.88
RTL4-201ENST00000340433 C4orf17Q53FE4 359 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms