RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 MRIQ9BWK5 157 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 TTF2Q9UNY4 1162 aaKnown RBP9.35□□□□□ -0.91
TMC1-202ENST00000340019 SLC4A4Q9Y6R1 1079 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 VIL1P09327 827 aaKnown RBP9.35□□□□□ -0.91
TMC1-202ENST00000340019 KCNA4P22459 653 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 SLF2Q8IX21 1173 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 CNKSR2Q8WXI2 1034 aa9.35□□□□□ -0.91
TMC1-202ENST00000340019 BAZ2AQ9UIF9 1905 aaKnown RBP9.35□□□□□ -0.91
TMC1-202ENST00000340019 ZKSCAN1P17029 563 aaPredicted RBP9.34□□□□□ -0.91
TMC1-202ENST00000340019 ADCK5Q3MIX3 580 aa9.34□□□□□ -0.91
TMC1-202ENST00000340019 CTNNA3Q9UI47 895 aa9.34□□□□□ -0.91
TMC1-202ENST00000340019 PSMD14O00487 310 aa9.34□□□□□ -0.91
TMC1-202ENST00000340019 BAG3O95817 575 aa9.34□□□□□ -0.91
TMC1-202ENST00000340019 HDLBPQ00341 1268 aaKnown RBP9.34□□□□□ -0.91
TMC1-202ENST00000340019 RSBN1LQ6PCB5 846 aaPredicted RBP9.34□□□□□ -0.91
TMC1-202ENST00000340019 HHIPL2Q6UWX4 724 aa9.34□□□□□ -0.91
TMC1-202ENST00000340019 CERS3Q8IU89 383 aa9.34□□□□□ -0.91
TMC1-202ENST00000340019 SDR42E1Q8WUS8 393 aa9.34□□□□□ -0.91
TMC1-202ENST00000340019 GMLQ99445 158 aa9.34□□□□□ -0.91
TMC1-202ENST00000340019 TM6SF1Q9BZW5 370 aa9.34□□□□□ -0.91
TMC1-202ENST00000340019 DAGLAQ9Y4D2 1042 aa9.34□□□□□ -0.91
TMC1-202ENST00000340019 MYO3BQ8WXR4 1341 aa9.34□□□□□ -0.91
TMC1-202ENST00000340019 ECM29Q5VYK3 1845 aa9.34□□□□□ -0.91
TMC1-202ENST00000340019 DDX60LQ5H9U9 1706 aaKnown RBP9.34□□□□□ -0.92
TMC1-202ENST00000340019 F8W031 263 aaPredicted RBP9.33□□□□□ -0.92
TMC1-202ENST00000340019 RAD17O75943 681 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 BTDP43251 543 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 GIMAP6Q6P9H5 292 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 KIAA0825Q8IV33 1275 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 JDP2Q8WYK2 163 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 SNX21Q969T3 373 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 TIAM2Q8IVF5 1701 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 APPP05067 770 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 YBX3P16989 372 aaKnown RBP eCLIP9.33□□□□□ -0.92
TMC1-202ENST00000340019 RHBDL3P58872 404 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 CXCL9Q07325 125 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 IMMTQ16891 758 aaKnown RBP9.33□□□□□ -0.92
TMC1-202ENST00000340019 SH3RF3Q8TEJ3 882 aaPredicted RBP9.33□□□□□ -0.92
TMC1-202ENST00000340019 DDRGK1Q96HY6 314 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 CRNKL1Q9BZJ0 848 aaKnown RBP9.33□□□□□ -0.92
TMC1-202ENST00000340019 NBPF3Q9H094 633 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 ZSWIM6Q9HCJ5 1215 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 MKRN1Q9UHC7 482 aaKnown RBP9.33□□□□□ -0.92
TMC1-202ENST00000340019 LAMB1P07942 1786 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 NAV1Q8NEY1 1877 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 FZD9O00144 591 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 CD2BP2O95400 341 aaKnown RBP9.33□□□□□ -0.92
TMC1-202ENST00000340019 STOX1Q6ZVD7 989 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 IL27Q8NEV9 243 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 ZDHHC15Q96MV8 337 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 IPO9Q96P70 1041 aaKnown RBP9.33□□□□□ -0.92
TMC1-202ENST00000340019 NACAP1Q9BZK3 213 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 NAPBQ9H115 298 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 SERPINA10Q9UK55 444 aa9.33□□□□□ -0.92
TMC1-202ENST00000340019 ZNF213O14771 459 aa9.32□□□□□ -0.92
TMC1-202ENST00000340019 CRKP46108 304 aa9.32□□□□□ -0.92
TMC1-202ENST00000340019 SCNN1DP51172 638 aa9.32□□□□□ -0.92
TMC1-202ENST00000340019 COL9A3Q14050 684 aaPredicted RBP9.32□□□□□ -0.92
TMC1-202ENST00000340019 KRT32Q14532 448 aa9.32□□□□□ -0.92
TMC1-202ENST00000340019 APOBEC3HQ6NTF7 200 aaKnown RBP9.32□□□□□ -0.92
TMC1-202ENST00000340019 TEKT1Q969V4 418 aa9.32□□□□□ -0.92
TMC1-202ENST00000340019 DCP1AQ9NPI6 582 aaPredicted RBP9.32□□□□□ -0.92
TMC1-202ENST00000340019 ATP8A2Q9NTI2 1148 aa9.32□□□□□ -0.92
TMC1-202ENST00000340019 ARHGAP27Q6ZUM4 889 aa9.32□□□□□ -0.92
TMC1-202ENST00000340019 AGBL3Q8NEM8 1001 aa9.32□□□□□ -0.92
TMC1-202ENST00000340019 JAKMIP1Q96N16 626 aaKnown RBP9.32□□□□□ -0.92
TMC1-202ENST00000340019 NOL10Q9BSC4 688 aaKnown RBP9.32□□□□□ -0.92
TMC1-202ENST00000340019 TBC1D2Q9BYX2 928 aa9.32□□□□□ -0.92
TMC1-202ENST00000340019 E7EWF7 191 aa9.31□□□□□ -0.92
TMC1-202ENST00000340019 PLCG2P16885 1265 aa9.31□□□□□ -0.92
TMC1-202ENST00000340019 LMNB1P20700 586 aa9.31□□□□□ -0.92
TMC1-202ENST00000340019 CASTP20810 708 aaKnown RBP9.31□□□□□ -0.92
TMC1-202ENST00000340019 PSMA5P28066 241 aa9.31□□□□□ -0.92
TMC1-202ENST00000340019 TDO2P48775 406 aa9.31□□□□□ -0.92
TMC1-202ENST00000340019 HAND2P61296 217 aa9.31□□□□□ -0.92
TMC1-202ENST00000340019 CIAPIN1Q6FI81 312 aa9.31□□□□□ -0.92
TMC1-202ENST00000340019 TTC14Q96N46 770 aa9.31□□□□□ -0.92
TMC1-202ENST00000340019 UPF3BQ9BZI7 483 aaKnown RBP9.31□□□□□ -0.92
TMC1-202ENST00000340019 NEK4P51957 841 aa9.31□□□□□ -0.92
TMC1-202ENST00000340019 RUFY3Q7L099 469 aa9.31□□□□□ -0.92
TMC1-202ENST00000340019 NEK1Q96PY6 1258 aa9.31□□□□□ -0.92
TMC1-202ENST00000340019 ANAPC4Q9UJX5 808 aa9.31□□□□□ -0.92
TMC1-202ENST00000340019 ZBTB12Q9Y330 459 aaPredicted RBP9.31□□□□□ -0.92
TMC1-202ENST00000340019 MYH1P12882 1939 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 CTR9Q6PD62 1173 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 TBC1D10CQ8IV04 446 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 PCDHAC2Q9Y5I4 1007 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 ST18O60284 1047 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 CPA1P15085 419 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 TNIP1Q15025 636 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 SBK1Q52WX2 424 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 TGFBRAP1Q8WUH2 860 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 WDHD1O75717 1129 aaPredicted RBP9.3□□□□□ -0.92
TMC1-202ENST00000340019 RPS6KB1P23443 525 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 PPARAQ07869 468 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 CDC42EP5Q6NZY7 148 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 TEX11Q8IYF3 940 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 ARPP21Q9UBL0 812 aaPredicted RBP9.3□□□□□ -0.92
TMC1-202ENST00000340019 CYP46A1Q9Y6A2 500 aa9.3□□□□□ -0.92
TMC1-202ENST00000340019 TACC3Q9Y6A5 838 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms