RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 CCDC171Q6TFL3 1326 aa17.69■□□□□ 0.42
CSRP1-201ENST00000340006 RAD50Q92878 1312 aa17.69■□□□□ 0.42
CSRP1-201ENST00000340006 LMOD1P29536 600 aaPredicted RBP17.68■□□□□ 0.42
CSRP1-201ENST00000340006 LCORLQ8N3X6 602 aa17.68■□□□□ 0.42
CSRP1-201ENST00000340006 ZDHHC15Q96MV8 337 aa17.68■□□□□ 0.42
CSRP1-201ENST00000340006 STRBPQ96SI9 672 aaKnown RBP17.68■□□□□ 0.42
CSRP1-201ENST00000340006 MMP14P50281 582 aa17.68■□□□□ 0.42
CSRP1-201ENST00000340006 MYOZ2Q9NPC6 264 aa17.68■□□□□ 0.42
CSRP1-201ENST00000340006 USP40Q9NVE5 1235 aa17.68■□□□□ 0.42
CSRP1-201ENST00000340006 PCDHAC2Q9Y5I4 1007 aa17.68■□□□□ 0.42
CSRP1-201ENST00000340006 SLC4A4Q9Y6R1 1079 aa17.68■□□□□ 0.42
CSRP1-201ENST00000340006 SHTN1A0MZ66 631 aa17.67■□□□□ 0.42
CSRP1-201ENST00000340006 GLTPD2A6NH11 291 aa17.67■□□□□ 0.42
CSRP1-201ENST00000340006 PLCG2P16885 1265 aa17.67■□□□□ 0.42
CSRP1-201ENST00000340006 PPP4CP60510 307 aa17.67■□□□□ 0.42
CSRP1-201ENST00000340006 PRMT6Q96LA8 375 aaPredicted RBP17.67■□□□□ 0.42
CSRP1-201ENST00000340006 RIOK1Q9BRS2 568 aaKnown RBP17.67■□□□□ 0.42
CSRP1-201ENST00000340006 CRNKL1Q9BZJ0 848 aaKnown RBP17.67■□□□□ 0.42
CSRP1-201ENST00000340006 GPRC5DQ9NZD1 345 aa17.67■□□□□ 0.42
CSRP1-201ENST00000340006 MAST2Q6P0Q8 1798 aa17.67■□□□□ 0.42
CSRP1-201ENST00000340006 ZC3H4Q9UPT8 1303 aaKnown RBP17.67■□□□□ 0.42
CSRP1-201ENST00000340006 PATL2C9JE40 543 aaKnown RBP17.66■□□□□ 0.42
CSRP1-201ENST00000340006 GNAT2P19087 354 aa17.66■□□□□ 0.42
CSRP1-201ENST00000340006 APOBEC3HQ6NTF7 200 aaKnown RBP17.66■□□□□ 0.42
CSRP1-201ENST00000340006 CERS3Q8IU89 383 aa17.66■□□□□ 0.42
CSRP1-201ENST00000340006 SH3RF3Q8TEJ3 882 aaPredicted RBP17.66■□□□□ 0.42
CSRP1-201ENST00000340006 UPF2Q9HAU5 1272 aaKnown RBP17.66■□□□□ 0.42
CSRP1-201ENST00000340006 GAKO14976 1311 aa17.66■□□□□ 0.42
CSRP1-201ENST00000340006 HSPD1P10809 573 aaKnown RBP17.66■□□□□ 0.42
CSRP1-201ENST00000340006 USP5P45974 858 aa17.66■□□□□ 0.42
CSRP1-201ENST00000340006 VPS53Q5VIR6 699 aa17.66■□□□□ 0.42
CSRP1-201ENST00000340006 SAMD7Q7Z3H4 446 aa17.66■□□□□ 0.42
CSRP1-201ENST00000340006 PRKAB2O43741 272 aa17.65■□□□□ 0.42
CSRP1-201ENST00000340006 MYO1BO43795 1136 aa17.65■□□□□ 0.42
CSRP1-201ENST00000340006 PRKCSHP14314 528 aaPredicted RBP17.65■□□□□ 0.42
CSRP1-201ENST00000340006 EPS15P42566 896 aa17.65■□□□□ 0.42
CSRP1-201ENST00000340006 PTH1RQ03431 593 aa17.65■□□□□ 0.42
CSRP1-201ENST00000340006 TBC1D10BQ4KMP7 808 aaPredicted RBP17.65■□□□□ 0.42
CSRP1-201ENST00000340006 TEX11Q8IYF3 940 aa17.65■□□□□ 0.42
CSRP1-201ENST00000340006 DDRGK1Q96HY6 314 aa17.65■□□□□ 0.42
CSRP1-201ENST00000340006 TDRD3Q9H7E2 651 aaKnown RBP17.65■□□□□ 0.42
CSRP1-201ENST00000340006 ZNF280AP59817 542 aaPredicted RBP17.64■□□□□ 0.41
CSRP1-201ENST00000340006 TGFBRAP1Q8WUH2 860 aa17.64■□□□□ 0.41
CSRP1-201ENST00000340006 SDR42E1Q8WUS8 393 aa17.64■□□□□ 0.41
CSRP1-201ENST00000340006 NACAP1Q9BZK3 213 aa17.64■□□□□ 0.41
CSRP1-201ENST00000340006 CDC42EP5Q6NZY7 148 aa17.64■□□□□ 0.41
CSRP1-201ENST00000340006 ADAMTSL1Q8N6G6 1762 aa17.64■□□□□ 0.41
CSRP1-201ENST00000340006 SPDYE2BA6NHP3 402 aa17.63■□□□□ 0.41
CSRP1-201ENST00000340006 SPDYE6P0CI01 402 aa17.63■□□□□ 0.41
CSRP1-201ENST00000340006 USP26Q9BXU7 913 aa17.63■□□□□ 0.41
CSRP1-201ENST00000340006 LSG1Q9H089 658 aaKnown RBP17.63■□□□□ 0.41
CSRP1-201ENST00000340006 GSG1L2A8MUP6 293 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 WNT10BO00744 389 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 PICALMQ13492 652 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 NBPF9Q3BBW0 867 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 IFNL3Q8IZI9 196 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 MTMR14Q8NCE2 650 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 DSCC1Q9BVC3 393 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 TMOD2Q9NZR1 351 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 CLRN2A0PK11 232 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 TDO2P48775 406 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 RHBDL3P58872 404 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 KIF4BQ2VIQ3 1234 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 MAP4K1Q92918 833 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 ATP8A2Q9NTI2 1148 aa17.62■□□□□ 0.41
CSRP1-201ENST00000340006 EGFRP00533 1210 aa17.61■□□□□ 0.41
CSRP1-201ENST00000340006 FGAP02671 866 aa17.61■□□□□ 0.41
CSRP1-201ENST00000340006 CACNB3P54284 484 aa17.61■□□□□ 0.41
CSRP1-201ENST00000340006 MAPKAPK5Q8IW41 473 aa17.61■□□□□ 0.41
CSRP1-201ENST00000340006 NAPBQ9H115 298 aa17.61■□□□□ 0.41
CSRP1-201ENST00000340006 VEZTQ9HBM0 779 aa17.61■□□□□ 0.41
CSRP1-201ENST00000340006 CTNNA3Q9UI47 895 aa17.61■□□□□ 0.41
CSRP1-201ENST00000340006 HACL1Q9UJ83 578 aa17.61■□□□□ 0.41
CSRP1-201ENST00000340006 ADARB2Q9NS39 739 aaKnown RBP17.6■□□□□ 0.41
CSRP1-201ENST00000340006 ZNF70Q9UC06 446 aaPredicted RBP17.6■□□□□ 0.41
CSRP1-201ENST00000340006 U3KPZ7 1027 aaPredicted RBP17.6■□□□□ 0.41
CSRP1-201ENST00000340006 MCCP23508 829 aa17.6■□□□□ 0.41
CSRP1-201ENST00000340006 L3MBTL3Q96JM7 780 aaPredicted RBP17.6■□□□□ 0.41
CSRP1-201ENST00000340006 MCM9Q9NXL9 1143 aa17.6■□□□□ 0.41
CSRP1-201ENST00000340006 RBM8AQ9Y5S9 174 aaKnown RBP17.6■□□□□ 0.41
CSRP1-201ENST00000340006 IQCA1LA6NCM1 817 aa17.59■□□□□ 0.41
CSRP1-201ENST00000340006 MINDY4BA8MYZ0 360 aa17.59■□□□□ 0.41
CSRP1-201ENST00000340006 TCP10L2B9ZVM9 353 aa17.59■□□□□ 0.41
CSRP1-201ENST00000340006 TCP10Q12799 353 aa17.59■□□□□ 0.41
CSRP1-201ENST00000340006 DCP1AQ9NPI6 582 aaPredicted RBP17.59■□□□□ 0.41
CSRP1-201ENST00000340006 RPAP1Q9BWH6 1393 aaPredicted RBP17.59■□□□□ 0.41
CSRP1-201ENST00000340006 BAZ2AQ9UIF9 1905 aaKnown RBP17.59■□□□□ 0.41
CSRP1-201ENST00000340006 AMOTL1Q8IY63 956 aa17.59■□□□□ 0.41
CSRP1-201ENST00000340006 ZNF526Q8TF50 670 aaPredicted RBP17.59■□□□□ 0.41
CSRP1-201ENST00000340006 C22orf23Q9BZE7 217 aa17.59■□□□□ 0.41
CSRP1-201ENST00000340006 RRAGCQ9HB90 399 aa17.59■□□□□ 0.41
CSRP1-201ENST00000340006 SAP30BPQ9UHR5 308 aaKnown RBP17.59■□□□□ 0.41
CSRP1-201ENST00000340006 ECM29Q5VYK3 1845 aa17.59■□□□□ 0.41
CSRP1-201ENST00000340006 ZNF213O14771 459 aa17.58■□□□□ 0.4
CSRP1-201ENST00000340006 WDHD1O75717 1129 aaPredicted RBP17.58■□□□□ 0.4
CSRP1-201ENST00000340006 POLR3DP05423 398 aaPredicted RBP17.58■□□□□ 0.4
CSRP1-201ENST00000340006 EPHX2P34913 555 aa17.58■□□□□ 0.4
CSRP1-201ENST00000340006 SLC4A8Q2Y0W8 1093 aa17.58■□□□□ 0.4
CSRP1-201ENST00000340006 GIMAP6Q6P9H5 292 aa17.58■□□□□ 0.4
CSRP1-201ENST00000340006 ZSCAN29Q8IWY8 852 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms