RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 LRRC2Q9BYS8 371 aa14.32□□□□□ -0.12
USP47-202ENST00000339865 PTCD1O75127 700 aaKnown RBP14.32□□□□□ -0.12
USP47-202ENST00000339865 STK10O94804 968 aaKnown RBP14.32□□□□□ -0.12
USP47-202ENST00000339865 DNM1Q05193 864 aaKnown RBP14.32□□□□□ -0.12
USP47-202ENST00000339865 CERS3Q8IU89 383 aa14.32□□□□□ -0.12
USP47-202ENST00000339865 GNL1P36915 607 aaPredicted RBP14.32□□□□□ -0.12
USP47-202ENST00000339865 ZBTB33Q86T24 672 aa14.32□□□□□ -0.12
USP47-202ENST00000339865 SPATS2Q86XZ4 545 aaKnown RBP14.32□□□□□ -0.12
USP47-202ENST00000339865 TTC30BQ8N4P2 665 aa14.32□□□□□ -0.12
USP47-202ENST00000339865 MYD88Q99836 296 aa14.32□□□□□ -0.12
USP47-202ENST00000339865 ELF2Q15723 593 aa14.31□□□□□ -0.12
USP47-202ENST00000339865 GPR162Q16538 588 aa14.31□□□□□ -0.12
USP47-202ENST00000339865 MRPS27Q92552 414 aaKnown RBP14.31□□□□□ -0.12
USP47-202ENST00000339865 HS2ST1Q7LGA3 356 aa14.31□□□□□ -0.12
USP47-202ENST00000339865 UBL4BQ8N7F7 174 aa14.31□□□□□ -0.12
USP47-202ENST00000339865 ERO1AQ96HE7 468 aa14.31□□□□□ -0.12
USP47-202ENST00000339865 NAPGQ99747 312 aaPredicted RBP14.31□□□□□ -0.12
USP47-202ENST00000339865 SFMBT1Q9UHJ3 866 aa14.31□□□□□ -0.12
USP47-202ENST00000339865 DDX41Q9UJV9 622 aaKnown RBP14.31□□□□□ -0.12
USP47-202ENST00000339865 OAS2P29728 719 aaKnown RBP14.31□□□□□ -0.12
USP47-202ENST00000339865 STX10O60499 249 aa14.31□□□□□ -0.12
USP47-202ENST00000339865 WTAPQ15007 396 aa14.31□□□□□ -0.12
USP47-202ENST00000339865 NUB1Q9Y5A7 615 aa14.31□□□□□ -0.12
USP47-202ENST00000339865 THEGQ9P2T0 379 aa14.31□□□□□ -0.12
USP47-202ENST00000339865 KIFAP3Q92845 792 aa14.3□□□□□ -0.12
USP47-202ENST00000339865 ZBBXA8MT70 800 aa14.3□□□□□ -0.12
USP47-202ENST00000339865 EAPPQ56P03 285 aaPredicted RBP14.3□□□□□ -0.12
USP47-202ENST00000339865 PRDM11Q9NQV5 511 aa14.3□□□□□ -0.12
USP47-202ENST00000339865 PPFIA1Q13136 1202 aa14.3□□□□□ -0.12
USP47-202ENST00000339865 ZBTB21Q9ULJ3 1066 aa14.3□□□□□ -0.12
USP47-202ENST00000339865 ARHGAP4P98171 946 aa14.3□□□□□ -0.12
USP47-202ENST00000339865 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.3□□□□□ -0.12
USP47-202ENST00000339865 DHX29Q7Z478 1369 aaKnown RBP14.3□□□□□ -0.12
USP47-202ENST00000339865 ZBTB43O43298 467 aa14.3□□□□□ -0.12
USP47-202ENST00000339865 TSHZ3Q63HK5 1081 aa14.3□□□□□ -0.12
USP47-202ENST00000339865 BAZ1AQ9NRL2 1556 aaPredicted RBP14.3□□□□□ -0.12
USP47-202ENST00000339865 TSPY3P0CV98 308 aa14.3□□□□□ -0.12
USP47-202ENST00000339865 TSPY8P0CW00 308 aa14.3□□□□□ -0.12
USP47-202ENST00000339865 SCINQ9Y6U3 715 aa14.3□□□□□ -0.12
USP47-202ENST00000339865 LARSQ9P2J5 1176 aaKnown RBP14.29□□□□□ -0.12
USP47-202ENST00000339865 SLC8A1P32418 973 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 LGSNQ5TDP6 509 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 C6orf50Q9HD87 102 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 LONP1P36776 959 aaKnown RBP14.29□□□□□ -0.12
USP47-202ENST00000339865 HSP90AA5PQ58FG0 334 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 DUSP27Q5VZP5 1158 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 HELBQ8NG08 1087 aaPredicted RBP14.29□□□□□ -0.12
USP47-202ENST00000339865 IWS1Q96ST2 819 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 ADRA2BP18089 450 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 SLC12A2P55011 1212 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 RTN1Q16799 776 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 MMEL1Q495T6 779 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 UBE3BQ7Z3V4 1068 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 CARD6Q9BX69 1037 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 FHOD3Q2V2M9 1422 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 GNAT3A8MTJ3 354 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 BAG3O95817 575 aa14.29□□□□□ -0.12
USP47-202ENST00000339865 TROVE2P10155 538 aaKnown RBP eCLIP14.29□□□□□ -0.12
USP47-202ENST00000339865 RRS1Q15050 365 aaKnown RBP14.29□□□□□ -0.12
USP47-202ENST00000339865 KLF18A0A0U1RQI7 1052 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 HP1BP3Q5SSJ5 553 aaPredicted RBP14.28□□□□□ -0.12
USP47-202ENST00000339865 ANKRD42Q8N9B4 389 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 ATAD2Q6PL18 1390 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 BMP15O95972 392 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 CFAP61Q8NHU2 1237 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 CABP5Q9NP86 173 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 TMX3Q96JJ7 454 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 RNF40O75150 1001 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 HINFPQ9BQA5 517 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 PLEKHA4Q9H4M7 779 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 HLA-DOAP06340 250 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 ESRRGP62508 458 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 PLIN2Q99541 437 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 CCDC138Q96M89 665 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 GSTA1P08263 222 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 GSTA2P09210 222 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 KRT71Q3SY84 523 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 SUFUQ9UMX1 484 aa14.28□□□□□ -0.12
USP47-202ENST00000339865 ESYT2A0FGR8 921 aa14.27□□□□□ -0.12
USP47-202ENST00000339865 STX2P32856 288 aa14.27□□□□□ -0.12
USP47-202ENST00000339865 SNCBQ16143 134 aa14.27□□□□□ -0.12
USP47-202ENST00000339865 PPWD1Q96BP3 646 aaKnown RBP14.27□□□□□ -0.12
USP47-202ENST00000339865 ZKSCAN3Q9BRR0 538 aa14.27□□□□□ -0.12
USP47-202ENST00000339865 NACA2Q9H009 215 aa14.27□□□□□ -0.12
USP47-202ENST00000339865 EEF1B2P24534 225 aaKnown RBP14.27□□□□□ -0.12
USP47-202ENST00000339865 LIG3P49916 1009 aa14.27□□□□□ -0.12
USP47-202ENST00000339865 PIP4K2CQ8TBX8 421 aa14.27□□□□□ -0.12
USP47-202ENST00000339865 WAPLQ7Z5K2 1190 aa14.27□□□□□ -0.13
USP47-202ENST00000339865 GDAP1L1Q96MZ0 367 aa14.27□□□□□ -0.13
USP47-202ENST00000339865 KLHL14Q9P2G3 628 aa14.27□□□□□ -0.13
USP47-202ENST00000339865 ORC6Q9Y5N6 252 aa14.27□□□□□ -0.13
USP47-202ENST00000339865 KRT10P13645 584 aa14.27□□□□□ -0.13
USP47-202ENST00000339865 EEF1DP29692 281 aaKnown RBP14.27□□□□□ -0.13
USP47-202ENST00000339865 JADE1Q6IE81 842 aa14.27□□□□□ -0.13
USP47-202ENST00000339865 CASP2P42575 452 aa14.27□□□□□ -0.13
USP47-202ENST00000339865 NAPAP54920 295 aa14.27□□□□□ -0.13
USP47-202ENST00000339865 GABPB1Q06547 395 aaPredicted RBP14.27□□□□□ -0.13
USP47-202ENST00000339865 SPDYE3A6NKU9 549 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 SERPINI2O75830 405 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 MUM1L1Q5H9M0 696 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms