RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 LINC00301Q8NCQ3 95 aa12.69□□□□□ -0.38
SEMA4D-201ENST00000339861 EXOC5O00471 708 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 BMS1Q14692 1282 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 PDIA6Q15084 440 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 EEF2KMTQ96G04 330 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 G3V3G9 751 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 DCAF8Q5TAQ9 597 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 NOC3LQ8WTT2 800 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 CCDC47Q96A33 483 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 VWA3AA6NCI4 1184 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 RRAGBQ5VZM2 374 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 ERO1AQ96HE7 468 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 MRFAP1L1Q96HT8 127 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 ZHX3Q9H4I2 956 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 NIP7Q9Y221 180 aaKnown RBP eCLIP12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 IFT172Q9UG01 1749 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 PCDH11XQ9BZA7 1347 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 PCDH11YQ9BZA8 1340 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 NBPF26B4DH59 902 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 ZNF609O15014 1411 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 PHACTR2O75167 634 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 UQCRFS1P1P0C7P4 283 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 NCBP1Q09161 790 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 NBPF14Q5TI25 921 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 NBPF10Q6P3W6 841 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 NBPF15Q8N660 670 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 SDR42E1Q8WUS8 393 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 BAG1Q99933 345 aaPredicted RBP12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 VPS54Q9P1Q0 977 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 SERTAD1Q9UHV2 236 aa12.68□□□□□ -0.38
SEMA4D-201ENST00000339861 EVCP57679 992 aa12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 IFIT1BQ5T764 474 aaKnown RBP12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 WWC3Q9ULE0 1092 aa12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 PCDHA5Q9Y5H7 936 aa12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 TSPY2A6NKD2 308 aa12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 PRKAB2O43741 272 aa12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 MCM7P33993 719 aa12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 CAVIN4Q5BKX8 364 aa12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 DENND2AQ9ULE3 1009 aa12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 V9GY48 417 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 TRIM75PA6NK02 468 aa12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 ATL3Q6DD88 541 aa12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 TANGO6Q9C0B7 1094 aa12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 RNF41Q9H4P4 317 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-201ENST00000339861 YEATS4O95619 227 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 RHOXF2BP0C7M4 288 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 PDE6AP16499 860 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 ERCC3P19447 782 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 USP5P45974 858 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 KIAA1328Q86T90 577 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 ZNF710Q8N1W2 664 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 RHOXF2Q9BQY4 288 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 AXDND1Q5T1B0 1012 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 KRT23Q9C075 422 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 VPS16Q9H269 839 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 MKNK2Q9HBH9 465 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 SPTLC3Q9NUV7 552 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 BTG4Q9NY30 223 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 RTEL1Q9NZ71 1219 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 STX8Q9UNK0 236 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 JAKMIP3Q5VZ66 844 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 FEZ1Q99689 392 aa12.66□□□□□ -0.38
SEMA4D-201ENST00000339861 ATP6V1AP38606 617 aa12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 LMAN1P49257 510 aa12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 BCAMP50895 628 aa12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 NR5A1Q13285 461 aa12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 USP42Q9H9J4 1324 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 CEMIPQ8WUJ3 1361 aa12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 PLA2G4DQ86XP0 818 aa12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 FUCA2Q9BTY2 467 aa12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 BLZF1Q9H2G9 400 aa12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 CTDNEP1O95476 244 aa12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 ZNF569Q5MCW4 686 aa12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 SMYD4Q8IYR2 804 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 ESR2Q92731 530 aa12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 DEF6Q9H4E7 631 aa12.65□□□□□ -0.38
SEMA4D-201ENST00000339861 APOA5Q6Q788 366 aa12.65□□□□□ -0.39
SEMA4D-201ENST00000339861 DRC1Q96MC2 740 aa12.65□□□□□ -0.39
SEMA4D-201ENST00000339861 TEX13AQ9BXU3 409 aaPredicted RBP12.65□□□□□ -0.39
SEMA4D-201ENST00000339861 RIMS1Q86UR5 1692 aaKnown RBP12.65□□□□□ -0.39
SEMA4D-201ENST00000339861 ATG9AQ7Z3C6 839 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 CDK5RAP3Q96JB5 506 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 ZNHIT6Q9NWK9 470 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 SH3TC1Q8TE82 1336 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 KIF28PB7ZC32 967 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 H7C1W4 665 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 CASP1P29466 404 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 MATR3P43243 847 aaKnown RBP eCLIP12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 PPP1R13BQ96KQ4 1090 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 EPC1Q9H2F5 836 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 REREQ9P2R6 1566 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 CCDC194A0A1B0GVG4 234 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 CMA1P23946 247 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 HLFQ16534 295 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 CCDC70Q6NSX1 233 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 DZIP1Q86YF9 867 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 SPATA5Q8NB90 893 aa12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 GTPBP4Q9BZE4 634 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-201ENST00000339861 UBE2Q2LH0YL09 131 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms