RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 LRRCC1Q9C099 1032 aa7.59□□□□□ -1.19
ZNF28-201ENST00000339844 GOPCQ9HD26 462 aa7.59□□□□□ -1.19
ZNF28-201ENST00000339844 ZDHHC9Q9Y397 364 aa7.59□□□□□ -1.19
ZNF28-201ENST00000339844 ARFGEF1Q9Y6D6 1849 aa7.59□□□□□ -1.19
ZNF28-201ENST00000339844 WDR33Q9C0J8 1336 aaKnown RBP7.58□□□□□ -1.2
ZNF28-201ENST00000339844 NFKBIEO00221 500 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 HRO43593 1189 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 KDM4AO75164 1064 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 PRPF40AO75400 957 aaKnown RBP7.58□□□□□ -1.2
ZNF28-201ENST00000339844 CHMLP26374 656 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 NEK4P51957 841 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 PPP4CP60510 307 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 RASSF7Q02833 373 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 SF3B3Q15393 1217 aaKnown RBP7.58□□□□□ -1.2
ZNF28-201ENST00000339844 SKIV2LQ15477 1246 aaKnown RBP7.58□□□□□ -1.2
ZNF28-201ENST00000339844 GRIPAP1Q4V328 841 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 HSP90AB4PQ58FF6 505 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 TMEM87AQ8NBN3 555 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 SPIRE2Q8WWL2 714 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 RBM17Q96I25 401 aaKnown RBP7.58□□□□□ -1.2
ZNF28-201ENST00000339844 CRAMP1Q96RY5 1269 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 SEC31BQ9NQW1 1179 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 ZKSCAN5Q9Y2L8 839 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 ATP6V1DQ9Y5K8 247 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 TAF1P21675 1872 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 CACNA1SQ13698 1873 aa7.58□□□□□ -1.2
ZNF28-201ENST00000339844 GRM8O00222 908 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 DYNC1I1O14576 645 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 PDE8AO60658 829 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 ALDH1L1O75891 902 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 TPM3P06753 285 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 CFHP08603 1231 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 NBPF7P0C2Y1 421 aaPredicted RBP7.57□□□□□ -1.2
ZNF28-201ENST00000339844 ALDH1B1P30837 517 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 GCGRP47871 477 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 CTSWP56202 376 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 EPHA10Q5JZY3 1008 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 CAVIN1Q6NZI2 390 aaKnown RBP7.57□□□□□ -1.2
ZNF28-201ENST00000339844 KIAA1211Q6ZU35 1233 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 CELF1Q92879 486 aaKnown RBP7.57□□□□□ -1.2
ZNF28-201ENST00000339844 MEIS3Q99687 375 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 PLA2G12BQ9BX93 195 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 RBSNQ9H1K0 784 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 SNED1Q8TER0 1413 aa7.57□□□□□ -1.2
ZNF28-201ENST00000339844 PPEF1O14829 653 aaPredicted RBP7.56□□□□□ -1.2
ZNF28-201ENST00000339844 MX1P20591 662 aa7.56□□□□□ -1.2
ZNF28-201ENST00000339844 CLK2P49760 499 aaKnown RBP7.56□□□□□ -1.2
ZNF28-201ENST00000339844 USP46P62068 366 aa7.56□□□□□ -1.2
ZNF28-201ENST00000339844 FOXO4P98177 505 aa7.56□□□□□ -1.2
ZNF28-201ENST00000339844 GRAPQ13588 217 aa7.56□□□□□ -1.2
ZNF28-201ENST00000339844 MYSM1Q5VVJ2 828 aa7.56□□□□□ -1.2
ZNF28-201ENST00000339844 DDX46Q7L014 1031 aaKnown RBP7.56□□□□□ -1.2
ZNF28-201ENST00000339844 TTLL11Q8NHH1 800 aa7.56□□□□□ -1.2
ZNF28-201ENST00000339844 GRAPLQ8TC17 118 aaPredicted RBP7.56□□□□□ -1.2
ZNF28-201ENST00000339844 GPT2Q8TD30 523 aa7.56□□□□□ -1.2
ZNF28-201ENST00000339844 SSH3Q8TE77 659 aa7.56□□□□□ -1.2
ZNF28-201ENST00000339844 KAZALD1Q96I82 304 aa7.56□□□□□ -1.2
ZNF28-201ENST00000339844 SUCLG2Q96I99 432 aa7.56□□□□□ -1.2
ZNF28-201ENST00000339844 ZSCAN31Q96LW9 406 aaPredicted RBP7.56□□□□□ -1.2
ZNF28-201ENST00000339844 PRR14Q9BWN1 585 aa7.56□□□□□ -1.2
ZNF28-201ENST00000339844 TSPY26PQ9H489 355 aa7.56□□□□□ -1.2
ZNF28-201ENST00000339844 GREM2Q9H772 168 aa7.56□□□□□ -1.2
ZNF28-201ENST00000339844 UTYO14607 1347 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 CHD4Q14839 1912 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 SMARCA5O60264 1052 aaPredicted RBP7.55□□□□□ -1.2
ZNF28-201ENST00000339844 CSF1RP07333 972 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 SLC10A3P09131 477 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 YY1P25490 414 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 HSPA4P34932 840 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 CCDC152Q4G0S7 254 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 CCDC93Q567U6 631 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 C9orf131Q5VYM1 1079 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 TM6SF1Q9BZW5 370 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 USP44Q9H0E7 712 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 TAOK3Q9H2K8 898 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 C9orf78Q9NZ63 289 aaPredicted RBP7.55□□□□□ -1.2
ZNF28-201ENST00000339844 HPS5Q9UPZ3 1129 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 ATP6V0A2Q9Y487 856 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.55□□□□□ -1.2
ZNF28-201ENST00000339844 FER1L6Q2WGJ9 1857 aa7.55□□□□□ -1.2
ZNF28-201ENST00000339844 SOWAHBA6NEL2 793 aa7.54□□□□□ -1.2
ZNF28-201ENST00000339844 BBOX1O75936 387 aa7.54□□□□□ -1.2
ZNF28-201ENST00000339844 HSP90B1P14625 803 aaKnown RBP7.54□□□□□ -1.2
ZNF28-201ENST00000339844 BCAMP50895 628 aa7.54□□□□□ -1.2
ZNF28-201ENST00000339844 RPS8P62241 208 aaKnown RBP7.54□□□□□ -1.2
ZNF28-201ENST00000339844 HMGN5P82970 282 aaKnown RBP7.54□□□□□ -1.2
ZNF28-201ENST00000339844 SASS6Q6UVJ0 657 aa7.54□□□□□ -1.2
ZNF28-201ENST00000339844 LMBR1LQ6UX01 489 aa7.54□□□□□ -1.2
ZNF28-201ENST00000339844 ZGPATQ8N5A5 531 aaKnown RBP7.54□□□□□ -1.2
ZNF28-201ENST00000339844 OTUD7AQ8TE49 926 aaPredicted RBP7.54□□□□□ -1.2
ZNF28-201ENST00000339844 RUFY2Q8WXA3 655 aa7.54□□□□□ -1.2
ZNF28-201ENST00000339844 KCNB2Q92953 911 aa7.54□□□□□ -1.2
ZNF28-201ENST00000339844 KCTD12Q96CX2 325 aaKnown RBP7.54□□□□□ -1.2
ZNF28-201ENST00000339844 KIF1BPQ96EK5 621 aa7.54□□□□□ -1.2
ZNF28-201ENST00000339844 PRIMPOLQ96LW4 560 aa7.54□□□□□ -1.2
ZNF28-201ENST00000339844 ALDH8A1Q9H2A2 487 aaPredicted RBP7.54□□□□□ -1.2
ZNF28-201ENST00000339844 RNF181Q9P0P0 153 aa7.54□□□□□ -1.2
ZNF28-201ENST00000339844 TMEM63CQ9P1W3 806 aa7.54□□□□□ -1.2
ZNF28-201ENST00000339844 RTL9Q8NET4 1388 aa7.54□□□□□ -1.2
ZNF28-201ENST00000339844 LTBP3Q9NS15 1303 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms