RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 IP6K1Q92551 441 aa23.37■■□□□ 1.33
RUNX3-202ENST00000338888 LRRC59Q96AG4 307 aaKnown RBP23.37■■□□□ 1.33
RUNX3-202ENST00000338888 HELLSQ9NRZ9 838 aa23.37■■□□□ 1.33
RUNX3-202ENST00000338888 C1orf167Q5SNV9 1468 aa23.37■■□□□ 1.33
RUNX3-202ENST00000338888 GCP02774 474 aa23.37■■□□□ 1.33
RUNX3-202ENST00000338888 BEND6Q5SZJ8 279 aaPredicted RBP23.37■■□□□ 1.33
RUNX3-202ENST00000338888 SHC4Q6S5L8 630 aa23.37■■□□□ 1.33
RUNX3-202ENST00000338888 KCNH5Q8NCM2 988 aa23.37■■□□□ 1.33
RUNX3-202ENST00000338888 MRPL44Q9H9J2 332 aaKnown RBP23.37■■□□□ 1.33
RUNX3-202ENST00000338888 CDC27P30260 824 aa23.36■■□□□ 1.33
RUNX3-202ENST00000338888 MTF1Q14872 753 aa23.36■■□□□ 1.33
RUNX3-202ENST00000338888 PDIA6Q15084 440 aa23.36■■□□□ 1.33
RUNX3-202ENST00000338888 FOXP4Q8IVH2 680 aaPredicted RBP23.36■■□□□ 1.33
RUNX3-202ENST00000338888 ANKZF1Q9H8Y5 726 aa23.36■■□□□ 1.33
RUNX3-202ENST00000338888 SUGCTQ9HAC7 445 aa23.36■■□□□ 1.33
RUNX3-202ENST00000338888 KDM4FA0A1W2PPD8 638 aa23.36■■□□□ 1.33
RUNX3-202ENST00000338888 KLF18A0A0U1RQI7 1052 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 CPLX1O14810 134 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 PLEKHO1Q53GL0 409 aaPredicted RBP23.35■■□□□ 1.33
RUNX3-202ENST00000338888 WWC2Q6AWC2 1192 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 SRGAP1Q7Z6B7 1085 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 NEUROD6Q96NK8 337 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 CLIC6Q96NY7 704 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 LZTFL1Q9NQ48 299 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 PAG1Q9NWQ8 432 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 GOLGA8BA8MQT2 603 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 CUTAO60888 179 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 HAND2P61296 217 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 HDXQ7Z353 690 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 PNKPQ96T60 521 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 HPSEQ9Y251 543 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 FAN1Q9Y2M0 1017 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 PCDHA5Q9Y5H7 936 aa23.35■■□□□ 1.33
RUNX3-202ENST00000338888 IVLP07476 585 aa23.34■■□□□ 1.33
RUNX3-202ENST00000338888 C1orf141Q5JVX7 400 aa23.34■■□□□ 1.33
RUNX3-202ENST00000338888 SPECC1LQ69YQ0 1117 aa23.34■■□□□ 1.33
RUNX3-202ENST00000338888 METTL16Q86W50 562 aaKnown RBP23.34■■□□□ 1.33
RUNX3-202ENST00000338888 PLEKHG2Q9H7P9 1386 aa23.34■■□□□ 1.33
RUNX3-202ENST00000338888 BMP6P22004 513 aa23.34■■□□□ 1.33
RUNX3-202ENST00000338888 LONRF3Q496Y0 759 aa23.34■■□□□ 1.33
RUNX3-202ENST00000338888 ZMYM1Q5SVZ6 1142 aa23.34■■□□□ 1.33
RUNX3-202ENST00000338888 HPS5Q9UPZ3 1129 aa23.33■■□□□ 1.33
RUNX3-202ENST00000338888 HEG1Q9ULI3 1381 aa23.33■■□□□ 1.33
RUNX3-202ENST00000338888 GOLGA6L1Q8N7Z2 621 aa23.33■■□□□ 1.33
RUNX3-202ENST00000338888 HNRNPLLQ8WVV9 542 aaKnown RBP23.33■■□□□ 1.33
RUNX3-202ENST00000338888 AIFM3Q96NN9 605 aa23.33■■□□□ 1.33
RUNX3-202ENST00000338888 ABCB6Q9NP58 842 aa23.33■■□□□ 1.33
RUNX3-202ENST00000338888 MAST3O60307 1309 aa23.33■■□□□ 1.32
RUNX3-202ENST00000338888 A0A0U1RQJ8 604 aa23.32■■□□□ 1.32
RUNX3-202ENST00000338888 FOXN1O15353 648 aa23.32■■□□□ 1.32
RUNX3-202ENST00000338888 XAGE3Q8WTP9 111 aa23.32■■□□□ 1.32
RUNX3-202ENST00000338888 ATRIPQ8WXE1 791 aa23.32■■□□□ 1.32
RUNX3-202ENST00000338888 LTN1O94822 1766 aa23.32■■□□□ 1.32
RUNX3-202ENST00000338888 COPS6Q7L5N1 327 aa23.32■■□□□ 1.32
RUNX3-202ENST00000338888 CNNM3Q8NE01 707 aa23.32■■□□□ 1.32
RUNX3-202ENST00000338888 MYO1BO43795 1136 aa23.31■■□□□ 1.32
RUNX3-202ENST00000338888 GTF2A1P52655 376 aaPredicted RBP23.31■■□□□ 1.32
RUNX3-202ENST00000338888 NOM1Q5C9Z4 860 aaKnown RBP23.31■■□□□ 1.32
RUNX3-202ENST00000338888 UBE3BQ7Z3V4 1068 aa23.31■■□□□ 1.32
RUNX3-202ENST00000338888 STRCP1A6NGW2 1772 aa23.31■■□□□ 1.32
RUNX3-202ENST00000338888 NFAT5O94916 1531 aa23.31■■□□□ 1.32
RUNX3-202ENST00000338888 SOWAHDA6NJG2 315 aa23.31■■□□□ 1.32
RUNX3-202ENST00000338888 PHACTR2O75167 634 aa23.31■■□□□ 1.32
RUNX3-202ENST00000338888 L1RE1Q9UN81 338 aa23.31■■□□□ 1.32
RUNX3-202ENST00000338888 NFE2L3Q9Y4A8 694 aa23.31■■□□□ 1.32
RUNX3-202ENST00000338888 PRC1O43663 620 aa23.3■■□□□ 1.32
RUNX3-202ENST00000338888 EIF3JO75822 258 aaKnown RBP23.3■■□□□ 1.32
RUNX3-202ENST00000338888 CCDC175P0C221 793 aa23.3■■□□□ 1.32
RUNX3-202ENST00000338888 ZC3H6P61129 1189 aaKnown RBP23.3■■□□□ 1.32
RUNX3-202ENST00000338888 TIMM10P62072 90 aa23.3■■□□□ 1.32
RUNX3-202ENST00000338888 CCDC102BQ68D86 513 aa23.3■■□□□ 1.32
RUNX3-202ENST00000338888 PALLDQ8WX93 1383 aa23.3■■□□□ 1.32
RUNX3-202ENST00000338888 ANKRD65E5RJM6 399 aa23.3■■□□□ 1.32
RUNX3-202ENST00000338888 RHOXF2BP0C7M4 288 aa23.3■■□□□ 1.32
RUNX3-202ENST00000338888 ICE2Q659A1 982 aa23.3■■□□□ 1.32
RUNX3-202ENST00000338888 CTR9Q6PD62 1173 aa23.3■■□□□ 1.32
RUNX3-202ENST00000338888 TRMT44Q8IYL2 757 aaKnown RBP23.3■■□□□ 1.32
RUNX3-202ENST00000338888 RHOXF2Q9BQY4 288 aa23.3■■□□□ 1.32
RUNX3-202ENST00000338888 METTL22Q9BUU2 404 aaPredicted RBP23.3■■□□□ 1.32
RUNX3-202ENST00000338888 M0R2C6 588 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 TFRCP02786 760 aaKnown RBP23.29■■□□□ 1.32
RUNX3-202ENST00000338888 FMR1Q06787 632 aaKnown RBP eCLIP23.29■■□□□ 1.32
RUNX3-202ENST00000338888 PACS2Q86VP3 889 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 CDC23Q9UJX2 597 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 RAB21Q9UL25 225 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 USP54Q70EL1 1684 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 A0A1B0GUL7 405 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 ERLIN1O75477 346 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 USP5P45974 858 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 CEP112Q8N8E3 955 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 CCDC102AQ96A19 550 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 PPP6R2O75170 966 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 MAGEA9P43362 315 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 PTPAQ15257 358 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 RESP18Q5W5W9 173 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 JMYQ8N9B5 988 aa23.29■■□□□ 1.32
RUNX3-202ENST00000338888 EIF3CLB5ME19 914 aaKnown RBP23.28■■□□□ 1.32
RUNX3-202ENST00000338888 SPECC1Q5M775 1068 aa23.28■■□□□ 1.32
RUNX3-202ENST00000338888 ARHGEF25Q86VW2 580 aa23.28■■□□□ 1.32
RUNX3-202ENST00000338888 VPS37DQ86XT2 251 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms