RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 MROH1Q8NDA8 1641 aa7.21□□□□□ -1.26
PRKDC-202ENST00000338368 CALML3P27482 149 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 PDIA6Q15084 440 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 SDR42E1Q8WUS8 393 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 RBM17Q96I25 401 aaKnown RBP7.2□□□□□ -1.26
PRKDC-202ENST00000338368 URI1O94763 535 aaPredicted RBP7.2□□□□□ -1.26
PRKDC-202ENST00000338368 PPP2R5BQ15173 497 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 ARHGAP29Q52LW3 1261 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 SYNE4Q8N205 404 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 CALML4Q96GE6 196 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 TRIM28Q13263 835 aaKnown RBP7.2□□□□□ -1.26
PRKDC-202ENST00000338368 DHX58Q96C10 678 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 TNS3Q68CZ2 1445 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 KRT2P35908 639 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 HSP90AA4PQ58FG1 418 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 KIF1BO60333 1816 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 UBE4AQ14139 1066 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 NOM1Q5C9Z4 860 aaKnown RBP7.2□□□□□ -1.26
PRKDC-202ENST00000338368 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.2□□□□□ -1.26
PRKDC-202ENST00000338368 KIF20AO95235 890 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 FOXO4P98177 505 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 KIF18AQ8NI77 898 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 GGA1Q9UJY5 639 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 KCNQ4P56696 695 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 DEF6Q9H4E7 631 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 CYP19A1P11511 503 aaPredicted RBP7.2□□□□□ -1.26
PRKDC-202ENST00000338368 SKILP12757 684 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 SCRN1Q12765 414 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 ADD2P35612 726 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 C6orf50Q9HD87 102 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 UFL1O94874 794 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 RABL6Q3YEC7 729 aaPredicted RBP7.2□□□□□ -1.26
PRKDC-202ENST00000338368 WDR66Q8TBY9 1149 aa7.2□□□□□ -1.26
PRKDC-202ENST00000338368 PPARAQ07869 468 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 PTGS1P23219 599 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 MCM7P33993 719 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 MYL5Q02045 173 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 TFAP4Q01664 338 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 CAGE1Q8TC20 777 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 THRAP3Q9Y2W1 955 aaKnown RBP7.19□□□□□ -1.26
PRKDC-202ENST00000338368 PARP3Q9Y6F1 533 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 COL3A1P02461 1466 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-202ENST00000338368 FSD2A1L4K1 749 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 NAPAP54920 295 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 PDE4CQ08493 712 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 FAM182BQ5T319 152 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 NSUN7Q8NE18 718 aaKnown RBP7.19□□□□□ -1.26
PRKDC-202ENST00000338368 DIP2BQ9P265 1576 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 RRAGBQ5VZM2 374 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 PIH1D3Q9NQM4 214 aaKnown RBP7.19□□□□□ -1.26
PRKDC-202ENST00000338368 ZNF771Q7L3S4 317 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-202ENST00000338368 ZNF654Q8IZM8 581 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 MYO3AQ8NEV4 1616 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 FKBP15Q5T1M5 1219 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 DHX37Q8IY37 1157 aaKnown RBP7.19□□□□□ -1.26
PRKDC-202ENST00000338368 FBXO18Q8NFZ0 1043 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 SAP30BPQ9UHR5 308 aaKnown RBP7.19□□□□□ -1.26
PRKDC-202ENST00000338368 PRKCSHP14314 528 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-202ENST00000338368 KCNJ14Q9UNX9 436 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 RIMBP3CA6NJZ7 1639 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 RIMBP3BA6NNM3 1639 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 RIMBP3Q9UFD9 1639 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 ZNF174Q15697 407 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 ADALQ6DHV7 355 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 EYA3Q99504 573 aa7.19□□□□□ -1.26
PRKDC-202ENST00000338368 SNAP23O00161 211 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 ERFEQ4G0M1 354 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 HSP90B2PQ58FF3 399 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 CCDC150Q8NCX0 1101 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 LUC7LQ9NQ29 371 aaKnown RBP7.18□□□□□ -1.26
PRKDC-202ENST00000338368 BTBD18B2RXH4 712 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 STAT6P42226 847 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 SLFNL1Q499Z3 407 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 UBXN4Q92575 508 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 TTC14Q96N46 770 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 RMND1Q9NWS8 449 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 PDCL2Q8N4E4 241 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 ZNF397Q8NF99 534 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-202ENST00000338368 STX17P56962 302 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 FAM47AQ5JRC9 791 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 DTHD1Q6ZMT9 781 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 TICAM2Q86XR7 235 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 CBX8Q9HC52 389 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.18□□□□□ -1.26
PRKDC-202ENST00000338368 ARPP21Q9UBL0 812 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-202ENST00000338368 TNKSO95271 1327 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 N4BP3O15049 544 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 SPECC1Q5M775 1068 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 MAPKAPK5Q8IW41 473 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 PPP1R9BQ96SB3 815 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 USP42Q9H9J4 1324 aaKnown RBP7.18□□□□□ -1.26
PRKDC-202ENST00000338368 DEPDC5O75140 1603 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 RRP36Q96EU6 259 aaKnown RBP7.18□□□□□ -1.26
PRKDC-202ENST00000338368 PRIMPOLQ96LW4 560 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 PIK3AP1Q6ZUJ8 805 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 CMTR1Q8N1G2 835 aaKnown RBP7.18□□□□□ -1.26
PRKDC-202ENST00000338368 M0R2C6 588 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 SNW1Q13573 536 aaKnown RBP7.18□□□□□ -1.26
PRKDC-202ENST00000338368 FANCBQ8NB91 859 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 TRIM47Q96LD4 638 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms