RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 BCL2L13Q9BXK5 485 aa12.3□□□□□ -0.44
UBE2D3-202ENST00000338145 RTFDC1Q9BY42 306 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-202ENST00000338145 ATP6V0A2Q9Y487 856 aa12.3□□□□□ -0.44
UBE2D3-202ENST00000338145 WASF2Q9Y6W5 498 aa12.3□□□□□ -0.44
UBE2D3-202ENST00000338145 MAP3K15Q6ZN16 1313 aa12.3□□□□□ -0.44
UBE2D3-202ENST00000338145 TNRC18O15417 2968 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-202ENST00000338145 H7C1D1 291 aa12.29□□□□□ -0.44
UBE2D3-202ENST00000338145 AVPP01185 164 aa12.29□□□□□ -0.44
UBE2D3-202ENST00000338145 PRKAR2BP31323 418 aa12.29□□□□□ -0.44
UBE2D3-202ENST00000338145 KIF6Q6ZMV9 814 aa12.29□□□□□ -0.44
UBE2D3-202ENST00000338145 PPP1R42Q7Z4L9 355 aa12.29□□□□□ -0.44
UBE2D3-202ENST00000338145 CLUAP1Q96AJ1 413 aa12.29□□□□□ -0.44
UBE2D3-202ENST00000338145 PHACTR3Q96KR7 559 aa12.29□□□□□ -0.44
UBE2D3-202ENST00000338145 NLRP3Q96P20 1036 aa12.29□□□□□ -0.44
UBE2D3-202ENST00000338145 COL3A1P02461 1466 aaPredicted RBP12.28□□□□□ -0.44
UBE2D3-202ENST00000338145 J3QL48 77 aa12.28□□□□□ -0.44
UBE2D3-202ENST00000338145 GRM5P41594 1212 aa12.28□□□□□ -0.44
UBE2D3-202ENST00000338145 TAF7Q15545 349 aaPredicted RBP12.28□□□□□ -0.44
UBE2D3-202ENST00000338145 RGMBQ6NW40 437 aa12.28□□□□□ -0.44
UBE2D3-202ENST00000338145 NUDCQ9Y266 331 aa12.28□□□□□ -0.44
UBE2D3-202ENST00000338145 PCDHB9Q9Y5E1 797 aa12.28□□□□□ -0.44
UBE2D3-202ENST00000338145 PDE4DIPQ5VU43 2346 aa12.27□□□□□ -0.44
UBE2D3-202ENST00000338145 FAM187AA6NFU0 413 aa12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 ESPNB1AK53 854 aa12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 TCERG1O14776 1098 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 BBOX1O75936 387 aa12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 HIRAP54198 1017 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 SOX10P56693 466 aa12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 VAC14Q08AM6 782 aa12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 KIAA2012Q0VF49 1180 aa12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 ARID5BQ14865 1188 aa12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 PARP10Q53GL7 1025 aa12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 SUSD4Q5VX71 490 aa12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 DPP8Q6V1X1 898 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 C2orf69Q8N8R5 385 aa12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 CFAP53Q96M91 514 aa12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 KCTD15Q96SI1 283 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 CNOT7Q9UIV1 285 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-202ENST00000338145 FAM155AB1AL88 458 aaPredicted RBP12.26□□□□□ -0.45
UBE2D3-202ENST00000338145 PKDCCQ504Y2 493 aa12.26□□□□□ -0.45
UBE2D3-202ENST00000338145 MCM10Q7L590 875 aa12.26□□□□□ -0.45
UBE2D3-202ENST00000338145 CTU1Q7Z7A3 348 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-202ENST00000338145 USP48Q86UV5 1035 aa12.26□□□□□ -0.45
UBE2D3-202ENST00000338145 SP8Q8IXZ3 490 aa12.26□□□□□ -0.45
UBE2D3-202ENST00000338145 ZNF34Q8IZ26 560 aa12.26□□□□□ -0.45
UBE2D3-202ENST00000338145 NGEFQ8N5V2 710 aa12.26□□□□□ -0.45
UBE2D3-202ENST00000338145 PNISRQ8TF01 805 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-202ENST00000338145 DPF2Q92785 391 aa12.26□□□□□ -0.45
UBE2D3-202ENST00000338145 GCC1Q96CN9 775 aa12.26□□□□□ -0.45
UBE2D3-202ENST00000338145 ZIC5Q96T25 663 aa12.26□□□□□ -0.45
UBE2D3-202ENST00000338145 RNF186Q9NXI6 227 aa12.26□□□□□ -0.45
UBE2D3-202ENST00000338145 NTSR2O95665 410 aa12.25□□□□□ -0.45
UBE2D3-202ENST00000338145 GPTP24298 496 aa12.25□□□□□ -0.45
UBE2D3-202ENST00000338145 ZNF157P51786 506 aaPredicted RBP12.25□□□□□ -0.45
UBE2D3-202ENST00000338145 KIF23Q02241 960 aaPredicted RBP12.25□□□□□ -0.45
UBE2D3-202ENST00000338145 DHX9Q08211 1270 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-202ENST00000338145 PKN2Q16513 984 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-202ENST00000338145 SLC10A5Q5PT55 438 aa12.25□□□□□ -0.45
UBE2D3-202ENST00000338145 TRPM4Q8TD43 1214 aa12.25□□□□□ -0.45
UBE2D3-202ENST00000338145 GBA2Q9HCG7 927 aaPredicted RBP12.25□□□□□ -0.45
UBE2D3-202ENST00000338145 UBN2Q6ZU65 1347 aa12.25□□□□□ -0.45
UBE2D3-202ENST00000338145 TRPA1O75762 1119 aa12.24□□□□□ -0.45
UBE2D3-202ENST00000338145 RAD17O75943 681 aa12.24□□□□□ -0.45
UBE2D3-202ENST00000338145 FSHRP23945 695 aa12.24□□□□□ -0.45
UBE2D3-202ENST00000338145 NNTQ13423 1086 aa12.24□□□□□ -0.45
UBE2D3-202ENST00000338145 CTC1Q2NKJ3 1217 aa12.24□□□□□ -0.45
UBE2D3-202ENST00000338145 KRT26Q7Z3Y9 468 aa12.24□□□□□ -0.45
UBE2D3-202ENST00000338145 CRIPAKQ8N1N5 446 aa12.24□□□□□ -0.45
UBE2D3-202ENST00000338145 DCPSQ96C86 337 aaKnown RBP12.24□□□□□ -0.45
UBE2D3-202ENST00000338145 ZMYND15Q9H091 742 aa12.24□□□□□ -0.45
UBE2D3-202ENST00000338145 NUP98P52948 1817 aa12.23□□□□□ -0.45
UBE2D3-202ENST00000338145 ABCC4O15439 1325 aa12.23□□□□□ -0.45
UBE2D3-202ENST00000338145 SMCPP49901 116 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-202ENST00000338145 RNF20Q5VTR2 975 aa12.23□□□□□ -0.45
UBE2D3-202ENST00000338145 TTLL7Q6ZT98 887 aa12.23□□□□□ -0.45
UBE2D3-202ENST00000338145 TMC4Q7Z404 712 aa12.23□□□□□ -0.45
UBE2D3-202ENST00000338145 UTP14AQ9BVJ6 771 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-202ENST00000338145 RRP7AQ9Y3A4 280 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-202ENST00000338145 ERBB4Q15303 1308 aa12.22□□□□□ -0.45
UBE2D3-202ENST00000338145 RPS12P25398 132 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-202ENST00000338145 CCDC116Q8IYX3 515 aa12.22□□□□□ -0.45
UBE2D3-202ENST00000338145 CSRNP1Q96S65 589 aa12.22□□□□□ -0.45
UBE2D3-202ENST00000338145 LAMB4A4D0S4 1761 aa12.21□□□□□ -0.45
UBE2D3-202ENST00000338145 U2AF1L5P0DN76 240 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-202ENST00000338145 MYL6BP14649 208 aa12.21□□□□□ -0.45
UBE2D3-202ENST00000338145 U2AF1Q01081 240 aaKnown RBP eCLIP12.21□□□□□ -0.452e-12■□□□□ 11.1
UBE2D3-202ENST00000338145 SEMA3FQ13275 785 aa12.21□□□□□ -0.45
UBE2D3-202ENST00000338145 DCTN1Q14203 1278 aa12.21□□□□□ -0.45
UBE2D3-202ENST00000338145 INTS6LQ5JSJ4 861 aaKnown RBP12.21□□□□□ -0.45
UBE2D3-202ENST00000338145 DDX46Q7L014 1031 aaKnown RBP12.21□□□□□ -0.45
UBE2D3-202ENST00000338145 YDJCA8MPS7 323 aa12.2□□□□□ -0.46
UBE2D3-202ENST00000338145 NEFMP07197 916 aa12.2□□□□□ -0.46
UBE2D3-202ENST00000338145 EIF4A1P60842 406 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-202ENST00000338145 GRAPQ13588 217 aa12.2□□□□□ -0.46
UBE2D3-202ENST00000338145 SLC51AQ86UW1 340 aa12.2□□□□□ -0.46
UBE2D3-202ENST00000338145 GRAPLQ8TC17 118 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-202ENST00000338145 ALG2Q9H553 416 aa12.2□□□□□ -0.46
UBE2D3-202ENST00000338145 MIS18AQ9NYP9 233 aa12.2□□□□□ -0.46
UBE2D3-202ENST00000338145 CEP126Q9P2H0 1117 aa12.2□□□□□ -0.46
UBE2D3-202ENST00000338145 TRAK2O60296 914 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms