RNA–Protein interactions for RNA: ENST00000336097.7

NME1-202, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NME1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-202ENST00000336097 USP40Q9NVE5 1235 aa22.79■■□□□ 1.24
NME1-202ENST00000336097 MKRN1Q9UHC7 482 aaKnown RBP22.79■■□□□ 1.24
NME1-202ENST00000336097 GPR75-ASB3A0A0A6YYF3 556 aa22.78■■□□□ 1.24
NME1-202ENST00000336097 UNCXA6NJT0 531 aa22.78■■□□□ 1.24
NME1-202ENST00000336097 TCP10L2B9ZVM9 353 aa22.78■■□□□ 1.24
NME1-202ENST00000336097 TTLL12Q14166 644 aaPredicted RBP22.78■■□□□ 1.24
NME1-202ENST00000336097 CEP350Q5VT06 3117 aa22.78■■□□□ 1.24
NME1-202ENST00000336097 AOX1Q06278 1338 aa22.78■■□□□ 1.24
NME1-202ENST00000336097 RPAP1Q9BWH6 1393 aaPredicted RBP22.77■■□□□ 1.24
NME1-202ENST00000336097 SMARCA5O60264 1052 aaPredicted RBP22.77■■□□□ 1.24
NME1-202ENST00000336097 IDH1O75874 414 aaKnown RBP22.77■■□□□ 1.24
NME1-202ENST00000336097 BTDP43251 543 aa22.77■■□□□ 1.24
NME1-202ENST00000336097 DLK2Q6UY11 383 aa22.77■■□□□ 1.24
NME1-202ENST00000336097 PIH1D3Q9NQM4 214 aaKnown RBP22.77■■□□□ 1.24
NME1-202ENST00000336097 ECM29Q5VYK3 1845 aa22.76■■□□□ 1.23
NME1-202ENST00000336097 PAXIP1Q6ZW49 1069 aaPredicted RBP22.76■■□□□ 1.23
NME1-202ENST00000336097 FAM151AQ8WW52 585 aa22.76■■□□□ 1.23
NME1-202ENST00000336097 CCDC102AQ96A19 550 aa22.76■■□□□ 1.23
NME1-202ENST00000336097 HAUS7Q99871 368 aa22.76■■□□□ 1.23
NME1-202ENST00000336097 IDI2Q9BXS1 227 aa22.76■■□□□ 1.23
NME1-202ENST00000336097 SCAF8Q9UPN6 1271 aaKnown RBP22.76■■□□□ 1.23
NME1-202ENST00000336097 ERC2O15083 957 aa22.75■■□□□ 1.23
NME1-202ENST00000336097 ENTPD3O75355 529 aa22.75■■□□□ 1.23
NME1-202ENST00000336097 NPM3O75607 178 aaKnown RBP22.75■■□□□ 1.23
NME1-202ENST00000336097 ANKRD45Q5TZF3 282 aa22.75■■□□□ 1.23
NME1-202ENST00000336097 PRAMEF18Q5VWM3 479 aa22.75■■□□□ 1.23
NME1-202ENST00000336097 JMYQ8N9B5 988 aa22.75■■□□□ 1.23
NME1-202ENST00000336097 CAPNS2Q96L46 248 aa22.75■■□□□ 1.23
NME1-202ENST00000336097 DNAJC2Q99543 621 aaKnown RBP22.75■■□□□ 1.23
NME1-202ENST00000336097 PAPPA2Q9BXP8 1791 aa22.75■■□□□ 1.23
NME1-202ENST00000336097 TTC41PQ6P2S7 1318 aa22.75■■□□□ 1.23
NME1-202ENST00000336097 IREB2P48200 963 aaKnown RBP22.74■■□□□ 1.23
NME1-202ENST00000336097 RGMBQ6NW40 437 aa22.74■■□□□ 1.23
NME1-202ENST00000336097 SMC5Q8IY18 1101 aa22.74■■□□□ 1.23
NME1-202ENST00000336097 ZNF384Q8TF68 577 aa22.74■■□□□ 1.23
NME1-202ENST00000336097 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.74■■□□□ 1.23
NME1-202ENST00000336097 PAG1Q9NWQ8 432 aa22.74■■□□□ 1.23
NME1-202ENST00000336097 GOLIM4O00461 696 aa22.73■■□□□ 1.23
NME1-202ENST00000336097 VEGFBP49765 207 aa22.73■■□□□ 1.23
NME1-202ENST00000336097 CACNB3P54284 484 aa22.73■■□□□ 1.23
NME1-202ENST00000336097 PPP4CP60510 307 aa22.73■■□□□ 1.23
NME1-202ENST00000336097 NOGQ13253 232 aa22.73■■□□□ 1.23
NME1-202ENST00000336097 MAP3K11Q16584 847 aa22.73■■□□□ 1.23
NME1-202ENST00000336097 DCAF15Q66K64 600 aa22.73■■□□□ 1.23
NME1-202ENST00000336097 TMEM39BQ9GZU3 492 aa22.73■■□□□ 1.23
NME1-202ENST00000336097 BOLA2Q9H3K6 86 aa22.73■■□□□ 1.23
NME1-202ENST00000336097 CYP7A1P22680 504 aa22.72■■□□□ 1.23
NME1-202ENST00000336097 MAP2K2P36507 400 aa22.72■■□□□ 1.23
NME1-202ENST00000336097 LRRFIP1Q32MZ4 808 aaKnown RBP22.72■■□□□ 1.23
NME1-202ENST00000336097 NBPF12Q5TAG4 269 aaPredicted RBP22.72■■□□□ 1.23
NME1-202ENST00000336097 ZSCAN25Q6NSZ9 544 aa22.72■■□□□ 1.23
NME1-202ENST00000336097 TEPSINQ96N21 525 aa22.72■■□□□ 1.23
NME1-202ENST00000336097 WDR33Q9C0J8 1336 aaKnown RBP22.72■■□□□ 1.23
NME1-202ENST00000336097 POLR2AP24928 1970 aaKnown RBP22.72■■□□□ 1.23
NME1-202ENST00000336097 GLRX3O76003 335 aaKnown RBP22.71■■□□□ 1.23
NME1-202ENST00000336097 ZNF157P51786 506 aaPredicted RBP22.71■■□□□ 1.23
NME1-202ENST00000336097 ANGEL1Q9UNK9 670 aaKnown RBP22.71■■□□□ 1.23
NME1-202ENST00000336097 AKAP11Q9UKA4 1901 aa22.7■■□□□ 1.23
NME1-202ENST00000336097 MX1P20591 662 aa22.7■■□□□ 1.22
NME1-202ENST00000336097 RGS3P49796 1198 aa22.7■■□□□ 1.22
NME1-202ENST00000336097 RHBDL3P58872 404 aa22.7■■□□□ 1.22
NME1-202ENST00000336097 LDLRAD1Q5T700 205 aa22.7■■□□□ 1.22
NME1-202ENST00000336097 TEX11Q8IYF3 940 aa22.7■■□□□ 1.22
NME1-202ENST00000336097 MAGEB6Q8N7X4 407 aa22.7■■□□□ 1.22
NME1-202ENST00000336097 ANTXR1Q9H6X2 564 aa22.7■■□□□ 1.22
NME1-202ENST00000336097 MAST2Q6P0Q8 1798 aa22.7■■□□□ 1.22
NME1-202ENST00000336097 RFX7Q2KHR2 1363 aa22.69■■□□□ 1.22
NME1-202ENST00000336097 UBE2Q2LH0YL09 131 aa22.69■■□□□ 1.22
NME1-202ENST00000336097 WDHD1O75717 1129 aaPredicted RBP22.69■■□□□ 1.22
NME1-202ENST00000336097 CENPBP07199 599 aaPredicted RBP22.69■■□□□ 1.22
NME1-202ENST00000336097 NFIAQ12857 509 aa22.69■■□□□ 1.22
NME1-202ENST00000336097 SLC9C2Q5TAH2 1124 aa22.69■■□□□ 1.22
NME1-202ENST00000336097 CYP4F22Q6NT55 531 aa22.69■■□□□ 1.22
NME1-202ENST00000336097 REM2Q8IYK8 340 aaPredicted RBP22.69■■□□□ 1.22
NME1-202ENST00000336097 FAM198AQ9UFP1 575 aa22.69■■□□□ 1.22
NME1-202ENST00000336097 NDUFB9Q9Y6M9 179 aa22.69■■□□□ 1.22
NME1-202ENST00000336097 PDE6AP16499 860 aa22.68■■□□□ 1.22
NME1-202ENST00000336097 IRX6P78412 446 aaPredicted RBP22.68■■□□□ 1.22
NME1-202ENST00000336097 MAP2K1Q02750 393 aaPredicted RBP22.68■■□□□ 1.22
NME1-202ENST00000336097 TCP10Q12799 353 aa22.68■■□□□ 1.22
NME1-202ENST00000336097 ANKRD13AQ8IZ07 590 aa22.68■■□□□ 1.22
NME1-202ENST00000336097 AATFQ9NY61 560 aaKnown RBP eCLIP22.68■■□□□ 1.22
NME1-202ENST00000336097 SSC5DA1L4H1 1573 aa22.67■■□□□ 1.22
NME1-202ENST00000336097 COL2A1P02458 1487 aaPredicted RBP22.67■■□□□ 1.22
NME1-202ENST00000336097 PRKG1Q13976 671 aa22.67■■□□□ 1.22
NME1-202ENST00000336097 ZSCAN29Q8IWY8 852 aaPredicted RBP22.67■■□□□ 1.22
NME1-202ENST00000336097 MYH2Q9UKX2 1941 aa22.67■■□□□ 1.22
NME1-202ENST00000336097 SLC10A3P09131 477 aa22.66■■□□□ 1.22
NME1-202ENST00000336097 GRM1Q13255 1194 aa22.66■■□□□ 1.22
NME1-202ENST00000336097 ZNF341Q9BYN7 854 aa22.66■■□□□ 1.22
NME1-202ENST00000336097 STAP2Q9UGK3 403 aa22.66■■□□□ 1.22
NME1-202ENST00000336097 CSADQ9Y600 493 aa22.66■■□□□ 1.22
NME1-202ENST00000336097 ATRNL1Q5VV63 1379 aa22.65■■□□□ 1.22
NME1-202ENST00000336097 USP2O75604 605 aaPredicted RBP22.65■■□□□ 1.22
NME1-202ENST00000336097 IGHDP01880 384 aa22.65■■□□□ 1.22
NME1-202ENST00000336097 NUCB1Q02818 461 aa22.65■■□□□ 1.22
NME1-202ENST00000336097 PICALMQ13492 652 aa22.65■■□□□ 1.22
NME1-202ENST00000336097 UBE3CQ15386 1083 aa22.65■■□□□ 1.22
NME1-202ENST00000336097 CHD1LQ86WJ1 897 aa22.65■■□□□ 1.22
NME1-202ENST00000336097 SH3RF3Q8TEJ3 882 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms