RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ZNF526Q8TF50 670 aaPredicted RBP25.78■■□□□ 1.72
TPM1-204ENST00000334895 MAP4K1Q92918 833 aa25.78■■□□□ 1.72
TPM1-204ENST00000334895 CDK5RAP2Q96SN8 1893 aa25.78■■□□□ 1.72
TPM1-204ENST00000334895 USP17L8P0C7I0 530 aa25.77■■□□□ 1.72
TPM1-204ENST00000334895 ZDHHC15Q96MV8 337 aa25.77■■□□□ 1.72
TPM1-204ENST00000334895 DSCC1Q9BVC3 393 aa25.77■■□□□ 1.72
TPM1-204ENST00000334895 RHBDL3P58872 404 aa25.77■■□□□ 1.72
TPM1-204ENST00000334895 GPC2Q8N158 579 aa25.77■■□□□ 1.72
TPM1-204ENST00000334895 SH3RF3Q8TEJ3 882 aaPredicted RBP25.77■■□□□ 1.72
TPM1-204ENST00000334895 EPB41L2O43491 1005 aaKnown RBP25.76■■□□□ 1.71
TPM1-204ENST00000334895 BAG3O95817 575 aa25.76■■□□□ 1.71
TPM1-204ENST00000334895 EPB41L4AQ9HCS5 686 aaPredicted RBP25.76■■□□□ 1.71
TPM1-204ENST00000334895 GSG1L2A8MUP6 293 aa25.75■■□□□ 1.71
TPM1-204ENST00000334895 CFAP100Q494V2 611 aa25.75■■□□□ 1.71
TPM1-204ENST00000334895 DPF2Q92785 391 aa25.75■■□□□ 1.71
TPM1-204ENST00000334895 SLC4A4Q9Y6R1 1079 aa25.75■■□□□ 1.71
TPM1-204ENST00000334895 GNAT2P19087 354 aa25.74■■□□□ 1.71
TPM1-204ENST00000334895 ZNF280AP59817 542 aaPredicted RBP25.74■■□□□ 1.71
TPM1-204ENST00000334895 ZNF784Q8NCA9 323 aaPredicted RBP25.74■■□□□ 1.71
TPM1-204ENST00000334895 SDR42E1Q8WUS8 393 aa25.74■■□□□ 1.71
TPM1-204ENST00000334895 HDAC9Q9UKV0 1011 aa25.74■■□□□ 1.71
TPM1-204ENST00000334895 RBM8AQ9Y5S9 174 aaKnown RBP25.74■■□□□ 1.71
TPM1-204ENST00000334895 ECM29Q5VYK3 1845 aa25.74■■□□□ 1.71
TPM1-204ENST00000334895 WDR90Q96KV7 1748 aa25.74■■□□□ 1.71
TPM1-204ENST00000334895 GLTPD2A6NH11 291 aa25.74■■□□□ 1.71
TPM1-204ENST00000334895 PATL2C9JE40 543 aaKnown RBP25.74■■□□□ 1.71
TPM1-204ENST00000334895 OGFOD1Q8N543 542 aa25.74■■□□□ 1.71
TPM1-204ENST00000334895 TBC1D32Q96NH3 1257 aa25.74■■□□□ 1.71
TPM1-204ENST00000334895 NOL10Q9BSC4 688 aaKnown RBP25.74■■□□□ 1.71
TPM1-204ENST00000334895 C22orf23Q9BZE7 217 aa25.74■■□□□ 1.71
TPM1-204ENST00000334895 UPF2Q9HAU5 1272 aaKnown RBP25.74■■□□□ 1.71
TPM1-204ENST00000334895 FOCADQ5VW36 1801 aa25.73■■□□□ 1.71
TPM1-204ENST00000334895 DDNO94850 711 aaPredicted RBP25.73■■□□□ 1.71
TPM1-204ENST00000334895 RBM5P52756 815 aaKnown RBP eCLIP25.73■■□□□ 1.71
TPM1-204ENST00000334895 PRMT6Q96LA8 375 aaPredicted RBP25.73■■□□□ 1.71
TPM1-204ENST00000334895 NECTIN1Q15223 517 aa25.72■■□□□ 1.71
TPM1-204ENST00000334895 DPY19L2Q6NUT2 758 aa25.72■■□□□ 1.71
TPM1-204ENST00000334895 CDC42EP5Q6NZY7 148 aa25.72■■□□□ 1.71
TPM1-204ENST00000334895 CERS3Q8IU89 383 aa25.72■■□□□ 1.71
TPM1-204ENST00000334895 MICALL2Q8IY33 904 aa25.72■■□□□ 1.71
TPM1-204ENST00000334895 ZBED3Q96IU2 234 aaPredicted RBP25.72■■□□□ 1.71
TPM1-204ENST00000334895 CRNKL1Q9BZJ0 848 aaKnown RBP25.72■■□□□ 1.71
TPM1-204ENST00000334895 TSHZ2Q9NRE2 1034 aa25.72■■□□□ 1.71
TPM1-204ENST00000334895 FGAP02671 866 aa25.71■■□□□ 1.71
TPM1-204ENST00000334895 PLCG2P16885 1265 aa25.71■■□□□ 1.71
TPM1-204ENST00000334895 HSPA4P34932 840 aa25.71■■□□□ 1.71
TPM1-204ENST00000334895 IFNL3Q8IZI9 196 aa25.71■■□□□ 1.71
TPM1-204ENST00000334895 MTMR14Q8NCE2 650 aa25.71■■□□□ 1.71
TPM1-204ENST00000334895 CNOT7Q9UIV1 285 aaKnown RBP25.71■■□□□ 1.71
TPM1-204ENST00000334895 U3KPZ7 1027 aaPredicted RBP25.71■■□□□ 1.71
TPM1-204ENST00000334895 RPAP1Q9BWH6 1393 aaPredicted RBP25.71■■□□□ 1.71
TPM1-204ENST00000334895 BAZ2AQ9UIF9 1905 aaKnown RBP25.71■■□□□ 1.71
TPM1-204ENST00000334895 SCN4AP35499 1836 aa25.71■■□□□ 1.71
TPM1-204ENST00000334895 SPDYE2BA6NHP3 402 aa25.7■■□□□ 1.71
TPM1-204ENST00000334895 EGFRP00533 1210 aa25.7■■□□□ 1.71
TPM1-204ENST00000334895 APPP05067 770 aa25.7■■□□□ 1.71
TPM1-204ENST00000334895 SPDYE6P0CI01 402 aa25.7■■□□□ 1.71
TPM1-204ENST00000334895 RBM25P49756 843 aaKnown RBP25.7■■□□□ 1.71
TPM1-204ENST00000334895 ALX1Q15699 326 aa25.7■■□□□ 1.71
TPM1-204ENST00000334895 MYOZ2Q9NPC6 264 aa25.7■■□□□ 1.71
TPM1-204ENST00000334895 USP40Q9NVE5 1235 aa25.7■■□□□ 1.71
TPM1-204ENST00000334895 MKRN1Q9UHC7 482 aaKnown RBP25.7■■□□□ 1.71
TPM1-204ENST00000334895 PALD1Q9ULE6 856 aa25.7■■□□□ 1.71
TPM1-204ENST00000334895 DDX60LQ5H9U9 1706 aaKnown RBP25.7■■□□□ 1.7
TPM1-204ENST00000334895 TEX11Q8IYF3 940 aa25.7■■□□□ 1.7
TPM1-204ENST00000334895 DCP1AQ9NPI6 582 aaPredicted RBP25.7■■□□□ 1.7
TPM1-204ENST00000334895 GPRC5DQ9NZD1 345 aa25.7■■□□□ 1.7
TPM1-204ENST00000334895 ZMYM6O95789 1325 aa25.69■■□□□ 1.7
TPM1-204ENST00000334895 NAV1Q8NEY1 1877 aa25.69■■□□□ 1.7
TPM1-204ENST00000334895 WDHD1O75717 1129 aaPredicted RBP25.69■■□□□ 1.7
TPM1-204ENST00000334895 MMP14P50281 582 aa25.69■■□□□ 1.7
TPM1-204ENST00000334895 DLGAP5Q15398 846 aa25.69■■□□□ 1.7
TPM1-204ENST00000334895 TGFBRAP1Q8WUH2 860 aa25.69■■□□□ 1.7
TPM1-204ENST00000334895 LAMA4Q16363 1823 aa25.68■■□□□ 1.7
TPM1-204ENST00000334895 CREB3L3Q68CJ9 461 aa25.68■■□□□ 1.7
TPM1-204ENST00000334895 RASEFQ8IZ41 740 aa25.68■■□□□ 1.7
TPM1-204ENST00000334895 KCNB2Q92953 911 aa25.68■■□□□ 1.7
TPM1-204ENST00000334895 GPBP1L1Q9HC44 474 aaPredicted RBP25.68■■□□□ 1.7
TPM1-204ENST00000334895 TAF6LQ9Y6J9 622 aa25.68■■□□□ 1.7
TPM1-204ENST00000334895 SLC27A2O14975 620 aa25.67■■□□□ 1.7
TPM1-204ENST00000334895 TDRD3Q9H7E2 651 aaKnown RBP25.67■■□□□ 1.7
TPM1-204ENST00000334895 NMRK2Q9NPI5 230 aa25.67■■□□□ 1.7
TPM1-204ENST00000334895 ATP8A2Q9NTI2 1148 aa25.67■■□□□ 1.7
TPM1-204ENST00000334895 GIMAP6Q6P9H5 292 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 SAMD7Q7Z3H4 446 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 NACAP1Q9BZK3 213 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 NAPBQ9H115 298 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 DDX4Q9NQI0 724 aaKnown RBP25.66■■□□□ 1.7
TPM1-204ENST00000334895 FLT1P17948 1338 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 WNT10BO00744 389 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 CYP21A2P08686 494 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 EPS15P42566 896 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 USP5P45974 858 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 TDO2P48775 406 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 CACNB3P54284 484 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 NFIAQ12857 509 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 NBPF9Q3BBW0 867 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 MAPKAPK5Q8IW41 473 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 KIF2CQ99661 725 aa25.66■■□□□ 1.7
TPM1-204ENST00000334895 MCCP23508 829 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms