RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ATP2A2P16615 1042 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 ATXN3P54252 364 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 MAP3K10Q02779 954 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 NGEFQ8N5V2 710 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 SPATA32Q96LK8 384 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 TBC1D2Q9BYX2 928 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 RBSNQ9H1K0 784 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 KIF17Q9P2E2 1029 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 TEX14Q8IWB6 1497 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 GNB5O14775 395 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 MCF2LO15068 1137 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 AP1S2P56377 157 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 HORMAD1Q86X24 394 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 CASP10Q92851 521 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 HOOK2Q96ED9 719 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 GOLGA4Q13439 2230 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 ZBTB39O15060 712 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 KIAA0753Q2KHM9 967 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 ANKRD27Q96NW4 1050 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 SIN3AQ96ST3 1273 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 ATP6V1HQ9UI12 483 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 TBKBP1A7MCY6 615 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 CCND1P24385 295 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 RILPL1Q5EBL4 403 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 KANK4Q5T7N3 995 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 OLFM1Q99784 485 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 GJA8P48165 433 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 CUL3Q13618 768 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 RILPL2Q969X0 211 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 CCDC124Q96CT7 223 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 ARHGAP10A1A4S6 786 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 VDRP11473 427 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 SLC44A4Q53GD3 710 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 CSGALNACT2Q8N6G5 542 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 PLIN2Q99541 437 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 DCAF8L1A6NGE4 600 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 MCTP2Q6DN12 878 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 KLHL23Q8NBE8 558 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 CCDC14Q49A88 953 aa6.77□□□□□ -1.32
CDC42BPA-201ENST00000334218 OTUD6AQ7L8S5 288 aa6.77□□□□□ -1.32
CDC42BPA-201ENST00000334218 TEKT4Q8WW24 435 aa6.77□□□□□ -1.32
CDC42BPA-201ENST00000334218 TAF4BQ92750 862 aa6.77□□□□□ -1.32
CDC42BPA-201ENST00000334218 POLR2EP19388 210 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 MUM1Q2TAK8 710 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 UVSSAQ2YD98 709 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 PM20D2Q8IYS1 436 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 CABS1Q96KC9 395 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 KRT13P13646 458 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 GEN1Q17RS7 908 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 PARD3BQ8TEW8 1205 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 OSBPL9Q96SU4 736 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 PLVAPQ9BX97 442 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 COG4Q9H9E3 785 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 STX1BP61266 288 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 ARHGAP29Q52LW3 1261 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 NDEL1Q9GZM8 345 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 TUBAL3A6NHL2 446 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 PRC1O43663 620 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 TRAF7Q6Q0C0 670 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 SERPINB10P48595 397 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 TNNC2P02585 160 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 HOXA7P31268 230 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 IFI16Q16666 785 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 THUMPD2Q9BTF0 503 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 CARD8Q9Y2G2 431 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 SFPQP23246 707 aaKnown RBP eCLIP6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 SERPINB6P35237 376 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 TSHZ1Q6ZSZ6 1077 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 KIAA2013Q8IYS2 634 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 DPF3Q92784 378 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 DDX17Q92841 729 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 UPF3BQ9BZI7 483 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 KLHL31Q9H511 634 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 PRKRIP1Q9H875 184 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 ST7Q9NRC1 585 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 CEP126Q9P2H0 1117 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 FHOD3Q2V2M9 1422 aa6.77□□□□□ -1.33
CDC42BPA-201ENST00000334218 SCAMP1O15126 338 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 FLOT1O75955 427 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 STX1AQ16623 288 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 TDRD12Q587J7 1177 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 TRAIPQ9BWF2 469 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 TXLNGQ9NUQ3 528 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 EVLQ9UI08 416 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 SKIP12755 728 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 CASTP20810 708 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 PDE4AP27815 886 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 AFMP43652 599 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 INTS8Q75QN2 995 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 ANO2Q9NQ90 1003 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 SEPT3Q9UH03 358 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 GRIN2AQ12879 1464 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 CD109Q6YHK3 1445 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 GSTTP1A0A1W2PQM5 241 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 SLU7O95391 586 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 HP1BP3Q5SSJ5 553 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 STAG1Q8WVM7 1258 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 CALR3Q96L12 384 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 CEP70Q8NHQ1 597 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms