RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 DICER1Q9UPY3 1922 aaKnown RBP14.42□□□□□ -0.1
TRIM49B-201ENST00000332682 SBF1O95248 1867 aa14.42□□□□□ -0.1
TRIM49B-201ENST00000332682 BAZ2AQ9UIF9 1905 aaKnown RBP14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 PSMD14O00487 310 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 APPP05067 770 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 VIL1P09327 827 aaKnown RBP14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 YBX3P16989 372 aaKnown RBP eCLIP14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 BTDP43251 543 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 ALX1Q15699 326 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 TSGA10IPQ3SY00 556 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 KIAA0825Q8IV33 1275 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 IFNL3Q8IZI9 196 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 SDR42E1Q8WUS8 393 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 FOCADQ5VW36 1801 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 MYO3BQ8WXR4 1341 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 BAG3O95817 575 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 SCNN1DP51172 638 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 CXCL9Q07325 125 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 ADCK5Q3MIX3 580 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 RSBN1LQ6PCB5 846 aaPredicted RBP14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 ARHGAP27Q6ZUM4 889 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 CERS3Q8IU89 383 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 GMLQ99445 158 aa14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 NOL10Q9BSC4 688 aaKnown RBP14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 CRNKL1Q9BZJ0 848 aaKnown RBP14.41□□□□□ -0.1
TRIM49B-201ENST00000332682 TIAM2Q8IVF5 1701 aa14.4□□□□□ -0.1
TRIM49B-201ENST00000332682 LAMB1P07942 1786 aa14.4□□□□□ -0.1
TRIM49B-201ENST00000332682 NAV1Q8NEY1 1877 aa14.4□□□□□ -0.1
TRIM49B-201ENST00000332682 DDX60LQ5H9U9 1706 aaKnown RBP14.4□□□□□ -0.1
TRIM49B-201ENST00000332682 IMMTQ16891 758 aaKnown RBP14.4□□□□□ -0.1
TRIM49B-201ENST00000332682 HHIPL2Q6UWX4 724 aa14.4□□□□□ -0.1
TRIM49B-201ENST00000332682 SH3RF3Q8TEJ3 882 aaPredicted RBP14.4□□□□□ -0.1
TRIM49B-201ENST00000332682 TEKT1Q969V4 418 aa14.4□□□□□ -0.1
TRIM49B-201ENST00000332682 NACAP1Q9BZK3 213 aa14.4□□□□□ -0.1
TRIM49B-201ENST00000332682 NAPBQ9H115 298 aa14.4□□□□□ -0.1
TRIM49B-201ENST00000332682 ECM29Q5VYK3 1845 aa14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 FZD9O00144 591 aa14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 CRKP46108 304 aa14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 TDO2P48775 406 aa14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 RHBDL3P58872 404 aa14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 HAND2P61296 217 aa14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 HDLBPQ00341 1268 aaKnown RBP14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 CIAPIN1Q6FI81 312 aa14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 STOX1Q6ZVD7 989 aa14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 DDRGK1Q96HY6 314 aa14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 JAKMIP1Q96N16 626 aaKnown RBP14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 MRIQ9BWK5 157 aa14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 UPF3BQ9BZI7 483 aaKnown RBP14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 NBPF3Q9H094 633 aa14.39□□□□□ -0.11
TRIM49B-201ENST00000332682 PLCG2P16885 1265 aa14.38□□□□□ -0.11
TRIM49B-201ENST00000332682 LMNB1P20700 586 aa14.38□□□□□ -0.11
TRIM49B-201ENST00000332682 KRT32Q14532 448 aa14.38□□□□□ -0.11
TRIM49B-201ENST00000332682 GIMAP6Q6P9H5 292 aa14.38□□□□□ -0.11
TRIM49B-201ENST00000332682 ZDHHC15Q96MV8 337 aa14.38□□□□□ -0.11
TRIM49B-201ENST00000332682 TM6SF1Q9BZW5 370 aa14.38□□□□□ -0.11
TRIM49B-201ENST00000332682 DCP1AQ9NPI6 582 aaPredicted RBP14.38□□□□□ -0.11
TRIM49B-201ENST00000332682 ATP8A2Q9NTI2 1148 aa14.38□□□□□ -0.11
TRIM49B-201ENST00000332682 SERPINA10Q9UK55 444 aa14.38□□□□□ -0.11
TRIM49B-201ENST00000332682 ZBTB12Q9Y330 459 aaPredicted RBP14.38□□□□□ -0.11
TRIM49B-201ENST00000332682 ZNF213O14771 459 aa14.37□□□□□ -0.11
TRIM49B-201ENST00000332682 CD2BP2O95400 341 aaKnown RBP14.37□□□□□ -0.11
TRIM49B-201ENST00000332682 CASTP20810 708 aaKnown RBP14.37□□□□□ -0.11
TRIM49B-201ENST00000332682 COL9A3Q14050 684 aaPredicted RBP14.37□□□□□ -0.11
TRIM49B-201ENST00000332682 APOBEC3HQ6NTF7 200 aaKnown RBP14.37□□□□□ -0.11
TRIM49B-201ENST00000332682 AGBL3Q8NEM8 1001 aa14.37□□□□□ -0.11
TRIM49B-201ENST00000332682 MKRN1Q9UHC7 482 aaKnown RBP14.37□□□□□ -0.11
TRIM49B-201ENST00000332682 NEK4P51957 841 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 TNIP1Q15025 636 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 TBC1D10CQ8IV04 446 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 TEX11Q8IYF3 940 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 SNX21Q969T3 373 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 IPO9Q96P70 1041 aaKnown RBP14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 ZSWIM6Q9HCJ5 1215 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 PCDHAC2Q9Y5I4 1007 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 ZNF541Q9H0D2 1346 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 E7EWF7 191 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 CPA1P15085 419 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 PSMA5P28066 241 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 USP5P45974 858 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 CDC42EP5Q6NZY7 148 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 CTR9Q6PD62 1173 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 TGFBRAP1Q8WUH2 860 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 TBC1D2Q9BYX2 928 aa14.36□□□□□ -0.11
TRIM49B-201ENST00000332682 FLT1P17948 1338 aa14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 UTRNP46939 3433 aa14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 MYH1P12882 1939 aa14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 ST18O60284 1047 aa14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 WDHD1O75717 1129 aaPredicted RBP14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 USP17L8P0C7I0 530 aa14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 EIF6P56537 245 aaKnown RBP14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 PPARAQ07869 468 aa14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 CFAP100Q494V2 611 aa14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 BLOC1S2Q6QNY1 142 aa14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 RUFY3Q7L099 469 aa14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 IL27Q8NEV9 243 aa14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 TTC14Q96N46 770 aa14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 NEK1Q96PY6 1258 aa14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 ARPP21Q9UBL0 812 aaPredicted RBP14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 ANAPC4Q9UJX5 808 aa14.35□□□□□ -0.11
TRIM49B-201ENST00000332682 CYP46A1Q9Y6A2 500 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms