RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 HHIPL2Q6UWX4 724 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 GMLQ99445 158 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 CRNKL1Q9BZJ0 848 aaKnown RBP12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 PALD1Q9ULE6 856 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 SLC4A4Q9Y6R1 1079 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 FOCADQ5VW36 1801 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 NAV1Q8NEY1 1877 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 SLC27A2O14975 620 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 RNF20Q5VTR2 975 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 KIAA0825Q8IV33 1275 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 AGBL3Q8NEM8 1001 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 TEKT1Q969V4 418 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 KIF2CQ99661 725 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 EPB41L4AQ9HCS5 686 aaPredicted RBP12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 CTNNA3Q9UI47 895 aa12.24□□□□□ -0.45
VIPAS39-201ENST00000327028 ECM29Q5VYK3 1845 aa12.23□□□□□ -0.45
VIPAS39-201ENST00000327028 GSG1L2A8MUP6 293 aa12.23□□□□□ -0.45
VIPAS39-201ENST00000327028 PRKAB2O43741 272 aa12.23□□□□□ -0.45
VIPAS39-201ENST00000327028 PLCG2P16885 1265 aa12.23□□□□□ -0.45
VIPAS39-201ENST00000327028 SCNN1DP51172 638 aa12.23□□□□□ -0.45
VIPAS39-201ENST00000327028 SERPINA10Q9UK55 444 aa12.23□□□□□ -0.45
VIPAS39-201ENST00000327028 LAMB1P07942 1786 aa12.23□□□□□ -0.45
VIPAS39-201ENST00000327028 DDX60LQ5H9U9 1706 aaKnown RBP12.23□□□□□ -0.45
VIPAS39-201ENST00000327028 GOLGB1Q14789 3259 aaKnown RBP12.23□□□□□ -0.45
VIPAS39-201ENST00000327028 CRKP46108 304 aa12.23□□□□□ -0.45
VIPAS39-201ENST00000327028 EIF6P56537 245 aaKnown RBP12.23□□□□□ -0.45
VIPAS39-201ENST00000327028 NACAP1Q9BZK3 213 aa12.23□□□□□ -0.45
VIPAS39-201ENST00000327028 SNX14Q9Y5W7 946 aa12.23□□□□□ -0.45
VIPAS39-201ENST00000327028 FGAP02671 866 aa12.22□□□□□ -0.45
VIPAS39-201ENST00000327028 APPP05067 770 aa12.22□□□□□ -0.45
VIPAS39-201ENST00000327028 ZKSCAN1P17029 563 aaPredicted RBP12.22□□□□□ -0.45
VIPAS39-201ENST00000327028 GIMAP6Q6P9H5 292 aa12.22□□□□□ -0.45
VIPAS39-201ENST00000327028 IFNL3Q8IZI9 196 aa12.22□□□□□ -0.45
VIPAS39-201ENST00000327028 SH3RF3Q8TEJ3 882 aaPredicted RBP12.22□□□□□ -0.45
VIPAS39-201ENST00000327028 ZDHHC15Q96MV8 337 aa12.22□□□□□ -0.45
VIPAS39-201ENST00000327028 RPS12P25398 132 aaKnown RBP12.22□□□□□ -0.45
VIPAS39-201ENST00000327028 RASEFQ8IZ41 740 aa12.22□□□□□ -0.45
VIPAS39-201ENST00000327028 ZNF541Q9H0D2 1346 aa12.21□□□□□ -0.45
VIPAS39-201ENST00000327028 BAZ2AQ9UIF9 1905 aaKnown RBP12.21□□□□□ -0.45
VIPAS39-201ENST00000327028 CYP21A2P08686 494 aa12.21□□□□□ -0.45
VIPAS39-201ENST00000327028 ANP32AP39687 249 aaKnown RBP12.21□□□□□ -0.45
VIPAS39-201ENST00000327028 RHBDL3P58872 404 aa12.21□□□□□ -0.45
VIPAS39-201ENST00000327028 GPR162Q16538 588 aa12.21□□□□□ -0.45
VIPAS39-201ENST00000327028 TSGA10IPQ3SY00 556 aa12.21□□□□□ -0.45
VIPAS39-201ENST00000327028 SDR42E1Q8WUS8 393 aa12.21□□□□□ -0.45
VIPAS39-201ENST00000327028 NAPBQ9H115 298 aa12.21□□□□□ -0.45
VIPAS39-201ENST00000327028 HDAC9Q9UKV0 1011 aa12.21□□□□□ -0.45
VIPAS39-201ENST00000327028 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
VIPAS39-201ENST00000327028 GRIN3BO60391 1043 aa12.21□□□□□ -0.46
VIPAS39-201ENST00000327028 TDO2P48775 406 aa12.21□□□□□ -0.46
VIPAS39-201ENST00000327028 MMP14P50281 582 aa12.21□□□□□ -0.46
VIPAS39-201ENST00000327028 RABEP1Q15276 862 aa12.21□□□□□ -0.46
VIPAS39-201ENST00000327028 IMMTQ16891 758 aaKnown RBP12.21□□□□□ -0.46
VIPAS39-201ENST00000327028 ATP8A2Q9NTI2 1148 aa12.21□□□□□ -0.46
VIPAS39-201ENST00000327028 KRT32Q14532 448 aa12.2□□□□□ -0.46
VIPAS39-201ENST00000327028 APOBEC3HQ6NTF7 200 aaKnown RBP12.2□□□□□ -0.46
VIPAS39-201ENST00000327028 TEX11Q8IYF3 940 aa12.2□□□□□ -0.46
VIPAS39-201ENST00000327028 USP17L8P0C7I0 530 aa12.2□□□□□ -0.46
VIPAS39-201ENST00000327028 CFAP100Q494V2 611 aa12.2□□□□□ -0.46
VIPAS39-201ENST00000327028 OGFOD1Q8N543 542 aa12.2□□□□□ -0.46
VIPAS39-201ENST00000327028 DDRGK1Q96HY6 314 aa12.2□□□□□ -0.46
VIPAS39-201ENST00000327028 DCP1AQ9NPI6 582 aaPredicted RBP12.2□□□□□ -0.46
VIPAS39-201ENST00000327028 RNF181Q9P0P0 153 aa12.2□□□□□ -0.46
VIPAS39-201ENST00000327028 TAF6LQ9Y6J9 622 aa12.2□□□□□ -0.46
VIPAS39-201ENST00000327028 USP5P45974 858 aa12.19□□□□□ -0.46
VIPAS39-201ENST00000327028 RBM5P52756 815 aaKnown RBP eCLIP12.19□□□□□ -0.46
VIPAS39-201ENST00000327028 CDC42EP5Q6NZY7 148 aa12.19□□□□□ -0.46
VIPAS39-201ENST00000327028 DPF2Q92785 391 aa12.19□□□□□ -0.46
VIPAS39-201ENST00000327028 TM6SF1Q9BZW5 370 aa12.19□□□□□ -0.46
VIPAS39-201ENST00000327028 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
VIPAS39-201ENST00000327028 GJA3Q9Y6H8 435 aa12.19□□□□□ -0.46
VIPAS39-201ENST00000327028 MYH1P12882 1939 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 ZNF213O14771 459 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 GMPSP49915 693 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 ZNF280AP59817 542 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 C9orf131Q5VYM1 1079 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 MTMR14Q8NCE2 650 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 USP40Q9NVE5 1235 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 ARPP21Q9UBL0 812 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 SPDYE2BA6NHP3 402 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 SPDYE6P0CI01 402 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 PSMA5P28066 241 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 HAND2P61296 217 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 SBK1Q52WX2 424 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 GPC2Q8N158 579 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 IL27Q8NEV9 243 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 TGFBRAP1Q8WUH2 860 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 JAKMIP1Q96N16 626 aaKnown RBP12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 ANAPC4Q9UJX5 808 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 PCDHAC2Q9Y5I4 1007 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 FLT1P17948 1338 aa12.18□□□□□ -0.46
VIPAS39-201ENST00000327028 WDHD1O75717 1129 aaPredicted RBP12.17□□□□□ -0.46
VIPAS39-201ENST00000327028 ADCK5Q3MIX3 580 aa12.17□□□□□ -0.46
VIPAS39-201ENST00000327028 CTR9Q6PD62 1173 aa12.17□□□□□ -0.46
VIPAS39-201ENST00000327028 STOX1Q6ZVD7 989 aa12.17□□□□□ -0.46
VIPAS39-201ENST00000327028 ZC3H4Q9UPT8 1303 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-201ENST00000327028 E7EWF7 191 aa12.17□□□□□ -0.46
VIPAS39-201ENST00000327028 PPARAQ07869 468 aa12.17□□□□□ -0.46
VIPAS39-201ENST00000327028 DLGAP5Q15398 846 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms