RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 ARHGAP45Q92619 1136 aa10.11□□□□□ -0.79
CCNC-201ENST00000326298 MRIQ9BWK5 157 aa10.11□□□□□ -0.79
CCNC-201ENST00000326298 C1orf115Q9H7X2 142 aa10.11□□□□□ -0.79
CCNC-201ENST00000326298 RANBP2P49792 3224 aaKnown RBP10.11□□□□□ -0.79
CCNC-201ENST00000326298 ZSWIM8A7E2V4 1837 aa10.11□□□□□ -0.79
CCNC-201ENST00000326298 A0A1B0GUL7 405 aa10.11□□□□□ -0.79
CCNC-201ENST00000326298 TESPA1A2RU30 521 aaPredicted RBP10.11□□□□□ -0.79
CCNC-201ENST00000326298 HNRNPUQ00839 825 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCNC-201ENST00000326298 MTX1Q13505 466 aa10.11□□□□□ -0.79
CCNC-201ENST00000326298 SH3BP5LQ7L8J4 393 aa10.11□□□□□ -0.79
CCNC-201ENST00000326298 WDR66Q8TBY9 1149 aa10.11□□□□□ -0.79
CCNC-201ENST00000326298 XAGE2Q96GT9 111 aa10.11□□□□□ -0.79
CCNC-201ENST00000326298 WRNIP1Q96S55 665 aa10.11□□□□□ -0.79
CCNC-201ENST00000326298 KIAA0100Q14667 2235 aaKnown RBP10.1□□□□□ -0.79
CCNC-201ENST00000326298 IRF6O14896 467 aa10.1□□□□□ -0.79
CCNC-201ENST00000326298 TBC1D9Q6ZT07 1266 aa10.1□□□□□ -0.79
CCNC-201ENST00000326298 OTOP1Q7RTM1 612 aa10.1□□□□□ -0.79
CCNC-201ENST00000326298 CD99L2Q8TCZ2 262 aa10.1□□□□□ -0.79
CCNC-201ENST00000326298 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.1□□□□□ -0.79
CCNC-201ENST00000326298 ECM2O94769 699 aaPredicted RBP10.1□□□□□ -0.79
CCNC-201ENST00000326298 TNNI2P48788 182 aa10.1□□□□□ -0.79
CCNC-201ENST00000326298 NOM1Q5C9Z4 860 aaKnown RBP10.1□□□□□ -0.79
CCNC-201ENST00000326298 FAM83AQ86UY5 434 aa10.1□□□□□ -0.79
CCNC-201ENST00000326298 DDX4Q9NQI0 724 aaKnown RBP10.1□□□□□ -0.79
CCNC-201ENST00000326298 FBXO3Q9UK99 471 aa10.1□□□□□ -0.79
CCNC-201ENST00000326298 SUGT1Q9Y2Z0 365 aa10.1□□□□□ -0.79
CCNC-201ENST00000326298 CCL15-CCL14A0A0B4J2E2 113 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 SPDYE5A6NIY4 337 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 LDHBP07195 334 aaKnown RBP10.09□□□□□ -0.79
CCNC-201ENST00000326298 INHBEP58166 350 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 CCL15Q16663 113 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 DIEXFQ68CQ4 756 aaKnown RBP10.09□□□□□ -0.79
CCNC-201ENST00000326298 USP40Q9NVE5 1235 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 ABCF2Q9UG63 623 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 TRIM17Q9Y577 477 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 UNCXA6NJT0 531 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 GNAI3P08754 354 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 FKBP1CQ5VVH2 108 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 FAM151AQ8WW52 585 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 ARHGAP39Q9C0H5 1083 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 HMG20BQ9P0W2 317 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 SALL1Q9NSC2 1324 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 ATRNL1Q5VV63 1379 aa10.09□□□□□ -0.79
CCNC-201ENST00000326298 MYH2Q9UKX2 1941 aa10.08□□□□□ -0.8
CCNC-201ENST00000326298 RFX7Q2KHR2 1363 aa10.08□□□□□ -0.8
CCNC-201ENST00000326298 BTBD19C9JJ37 291 aa10.08□□□□□ -0.8
CCNC-201ENST00000326298 ALDH1A1P00352 501 aa10.08□□□□□ -0.8
CCNC-201ENST00000326298 FBXO46Q6PJ61 603 aaPredicted RBP10.08□□□□□ -0.8
CCNC-201ENST00000326298 CCDC84Q86UT8 332 aaPredicted RBP10.08□□□□□ -0.8
CCNC-201ENST00000326298 NEUROD6Q96NK8 337 aa10.08□□□□□ -0.8
CCNC-201ENST00000326298 DENND2AQ9ULE3 1009 aa10.08□□□□□ -0.8
CCNC-201ENST00000326298 SZT2Q5T011 3432 aa10.08□□□□□ -0.8
CCNC-201ENST00000326298 GAKO14976 1311 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 MAST3O60307 1309 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 DDTLA6NHG4 134 aaPredicted RBP10.07□□□□□ -0.8
CCNC-201ENST00000326298 WDHD1O75717 1129 aaPredicted RBP10.07□□□□□ -0.8
CCNC-201ENST00000326298 GNAI2P04899 355 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 CTGFP29279 349 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 RGS3P49796 1198 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 MECOMQ03112 1051 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 MOGSQ13724 837 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.07□□□□□ -0.8
CCNC-201ENST00000326298 CSADQ9Y600 493 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 AK9Q5TCS8 1911 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 POTEFA5A3E0 1075 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 FAM196BA6NMK8 535 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 MCAMP43121 646 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 SNRKQ9NRH2 765 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 GNL3LQ9NVN8 582 aaKnown RBP10.07□□□□□ -0.8
CCNC-201ENST00000326298 TMOD2Q9NZR1 351 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 ZNF112Q9UJU3 913 aa10.07□□□□□ -0.8
CCNC-201ENST00000326298 RPAP1Q9BWH6 1393 aaPredicted RBP10.06□□□□□ -0.8
CCNC-201ENST00000326298 PHF20L1A8MW92 1017 aa10.06□□□□□ -0.8
CCNC-201ENST00000326298 BTDP43251 543 aa10.06□□□□□ -0.8
CCNC-201ENST00000326298 RHBDL3P58872 404 aa10.06□□□□□ -0.8
CCNC-201ENST00000326298 SP3Q02447 781 aa10.06□□□□□ -0.8
CCNC-201ENST00000326298 PICALMQ13492 652 aa10.06□□□□□ -0.8
CCNC-201ENST00000326298 TAF1CQ15572 869 aaPredicted RBP10.06□□□□□ -0.8
CCNC-201ENST00000326298 ZKSCAN2Q63HK3 967 aa10.06□□□□□ -0.8
CCNC-201ENST00000326298 ERO1BQ86YB8 467 aa10.06□□□□□ -0.8
CCNC-201ENST00000326298 TLR7Q9NYK1 1049 aaKnown RBP10.06□□□□□ -0.8
CCNC-201ENST00000326298 SEMA3EO15041 775 aa10.06□□□□□ -0.8
CCNC-201ENST00000326298 IPO8O15397 1037 aaKnown RBP10.06□□□□□ -0.8
CCNC-201ENST00000326298 GTF2A2P52657 109 aa10.06□□□□□ -0.8
CCNC-201ENST00000326298 POLA2Q14181 598 aa10.06□□□□□ -0.8
CCNC-201ENST00000326298 PKN2Q16513 984 aaKnown RBP10.06□□□□□ -0.8
CCNC-201ENST00000326298 PTPN22Q9Y2R2 807 aa10.06□□□□□ -0.8
CCNC-201ENST00000326298 ZBTB7BO15156 539 aaPredicted RBP10.05□□□□□ -0.8
CCNC-201ENST00000326298 RRP1BQ14684 758 aaKnown RBP10.05□□□□□ -0.8
CCNC-201ENST00000326298 SPATA5Q8NB90 893 aa10.05□□□□□ -0.8
CCNC-201ENST00000326298 PANK1Q8TE04 598 aa10.05□□□□□ -0.8
CCNC-201ENST00000326298 NSUN4Q96CB9 384 aaKnown RBP10.05□□□□□ -0.8
CCNC-201ENST00000326298 DBNDD2Q9BQY9 259 aa10.05□□□□□ -0.8
CCNC-201ENST00000326298 IDI2Q9BXS1 227 aa10.05□□□□□ -0.8
CCNC-201ENST00000326298 ZNF341Q9BYN7 854 aa10.05□□□□□ -0.8
CCNC-201ENST00000326298 NDUFB9Q9Y6M9 179 aa10.05□□□□□ -0.8
CCNC-201ENST00000326298 CEP290O15078 2479 aa10.05□□□□□ -0.8
CCNC-201ENST00000326298 MYO5AQ9Y4I1 1855 aaKnown RBP10.05□□□□□ -0.8
CCNC-201ENST00000326298 MYCP01106 439 aaPredicted RBP10.05□□□□□ -0.8
CCNC-201ENST00000326298 PPIL2Q13356 520 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms