RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 C1orf115Q9H7X2 142 aa6.57□□□□□ -1.36
CBX3P1-201ENST00000325243 ZFYVE1Q9HBF4 777 aa6.57□□□□□ -1.36
CBX3P1-201ENST00000325243 NPHS2Q9NP85 383 aa6.57□□□□□ -1.36
CBX3P1-201ENST00000325243 PDE3AQ14432 1141 aa6.56□□□□□ -1.36
CBX3P1-201ENST00000325243 DDX54Q8TDD1 881 aaKnown RBP6.56□□□□□ -1.36
CBX3P1-201ENST00000325243 EHD4Q9H223 541 aa6.56□□□□□ -1.36
CBX3P1-201ENST00000325243 BRPF3Q9ULD4 1205 aa6.56□□□□□ -1.36
CBX3P1-201ENST00000325243 SLC5A6Q9Y289 635 aa6.56□□□□□ -1.36
CBX3P1-201ENST00000325243 H3BRB1 525 aa6.55□□□□□ -1.36
CBX3P1-201ENST00000325243 TMPRSS2O15393 492 aa6.55□□□□□ -1.36
CBX3P1-201ENST00000325243 SERPINB4P48594 390 aa6.55□□□□□ -1.36
CBX3P1-201ENST00000325243 ARHGAP4P98171 946 aa6.55□□□□□ -1.36
CBX3P1-201ENST00000325243 WDR89Q96FK6 387 aaPredicted RBP6.55□□□□□ -1.36
CBX3P1-201ENST00000325243 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
CBX3P1-201ENST00000325243 TUT1Q9H6E5 874 aaKnown RBP6.55□□□□□ -1.36
CBX3P1-201ENST00000325243 ABCB6Q9NP58 842 aa6.55□□□□□ -1.36
CBX3P1-201ENST00000325243 EGFL7Q9UHF1 273 aa6.55□□□□□ -1.36
CBX3P1-201ENST00000325243 SYNGAP1Q96PV0 1343 aa6.54□□□□□ -1.36
CBX3P1-201ENST00000325243 LIG1P18858 919 aa6.54□□□□□ -1.36
CBX3P1-201ENST00000325243 BNIP3Q12983 259 aa6.54□□□□□ -1.36
CBX3P1-201ENST00000325243 CDK5R2Q13319 367 aa6.54□□□□□ -1.36
CBX3P1-201ENST00000325243 PLCL1Q15111 1095 aa6.54□□□□□ -1.36
CBX3P1-201ENST00000325243 ZNF792Q3KQV3 632 aa6.54□□□□□ -1.36
CBX3P1-201ENST00000325243 CCDC86Q9H6F5 360 aaKnown RBP6.54□□□□□ -1.36
CBX3P1-201ENST00000325243 CRIM1Q9NZV1 1036 aa6.54□□□□□ -1.36
CBX3P1-201ENST00000325243 U3KQE9 123 aa6.54□□□□□ -1.36
CBX3P1-201ENST00000325243 CPNE3O75131 537 aaKnown RBP6.53□□□□□ -1.36
CBX3P1-201ENST00000325243 ZNF157P51786 506 aaPredicted RBP6.53□□□□□ -1.36
CBX3P1-201ENST00000325243 PTPN12Q05209 780 aaKnown RBP6.53□□□□□ -1.36
CBX3P1-201ENST00000325243 FAAP100Q0VG06 881 aa6.53□□□□□ -1.36
CBX3P1-201ENST00000325243 AP3B2Q13367 1082 aa6.53□□□□□ -1.36
CBX3P1-201ENST00000325243 PLD6Q8N2A8 252 aaKnown RBP6.53□□□□□ -1.36
CBX3P1-201ENST00000325243 FAM181AQ8N9Y4 354 aa6.53□□□□□ -1.36
CBX3P1-201ENST00000325243 FAM129BQ96TA1 746 aa6.53□□□□□ -1.36
CBX3P1-201ENST00000325243 ZC3H12CQ9C0D7 883 aaKnown RBP6.53□□□□□ -1.36
CBX3P1-201ENST00000325243 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.53□□□□□ -1.36
CBX3P1-201ENST00000325243 CARMIL2Q6F5E8 1435 aa6.52□□□□□ -1.37
CBX3P1-201ENST00000325243 IGHA2P01877 340 aa6.52□□□□□ -1.37
CBX3P1-201ENST00000325243 FAM87AP0C7U9 286 aa6.52□□□□□ -1.37
CBX3P1-201ENST00000325243 PRPF40BQ6NWY9 871 aaKnown RBP6.52□□□□□ -1.37
CBX3P1-201ENST00000325243 GLYCTKQ8IVS8 523 aa6.52□□□□□ -1.37
CBX3P1-201ENST00000325243 STK11IPQ8N1F8 1099 aa6.52□□□□□ -1.37
CBX3P1-201ENST00000325243 FANCD2OSQ96PS1 177 aa6.52□□□□□ -1.37
CBX3P1-201ENST00000325243 PCDHGC5Q9Y5F6 944 aa6.52□□□□□ -1.37
CBX3P1-201ENST00000325243 TMEM238LA0A1B0GVL6 79 aa6.51□□□□□ -1.37
CBX3P1-201ENST00000325243 NDUFB5O43674 189 aa6.51□□□□□ -1.37
CBX3P1-201ENST00000325243 ZNF862O60290 1169 aa6.51□□□□□ -1.37
CBX3P1-201ENST00000325243 NEFLP07196 543 aa6.51□□□□□ -1.37
CBX3P1-201ENST00000325243 CYP27C1Q4G0S4 372 aa6.51□□□□□ -1.37
CBX3P1-201ENST00000325243 GLIS3Q8NEA6 775 aa6.51□□□□□ -1.37
CBX3P1-201ENST00000325243 CCDC74AQ96AQ1 378 aa6.51□□□□□ -1.37
CBX3P1-201ENST00000325243 DISC1Q9NRI5 854 aa6.51□□□□□ -1.37
CBX3P1-201ENST00000325243 EIF1AYO14602 144 aaKnown RBP6.5□□□□□ -1.37
CBX3P1-201ENST00000325243 GPR182O15218 404 aa6.5□□□□□ -1.37
CBX3P1-201ENST00000325243 CD8BP10966 210 aa6.5□□□□□ -1.37
CBX3P1-201ENST00000325243 CD96P40200 585 aa6.5□□□□□ -1.37
CBX3P1-201ENST00000325243 ID3Q02535 119 aa6.5□□□□□ -1.37
CBX3P1-201ENST00000325243 RPS26P11Q5JNZ5 115 aaPredicted RBP6.5□□□□□ -1.37
CBX3P1-201ENST00000325243 ZNF648Q5T619 568 aaPredicted RBP6.5□□□□□ -1.37
CBX3P1-201ENST00000325243 NETO1Q8TDF5 533 aa6.5□□□□□ -1.37
CBX3P1-201ENST00000325243 MISP3Q96FF7 219 aa6.5□□□□□ -1.37
CBX3P1-201ENST00000325243 PIDD1Q9HB75 910 aa6.5□□□□□ -1.37
CBX3P1-201ENST00000325243 ADAMTS6Q9UKP5 1117 aa6.5□□□□□ -1.37
CBX3P1-201ENST00000325243 LEFTY1O75610 366 aa6.49□□□□□ -1.37
CBX3P1-201ENST00000325243 FUT4P22083 530 aa6.49□□□□□ -1.37
CBX3P1-201ENST00000325243 PDE3BQ13370 1112 aa6.49□□□□□ -1.37
CBX3P1-201ENST00000325243 GRM2Q14416 872 aa6.49□□□□□ -1.37
CBX3P1-201ENST00000325243 TTLL4Q14679 1199 aa6.49□□□□□ -1.37
CBX3P1-201ENST00000325243 KIF4BQ2VIQ3 1234 aa6.49□□□□□ -1.37
CBX3P1-201ENST00000325243 SMYD4Q8IYR2 804 aaPredicted RBP6.49□□□□□ -1.37
CBX3P1-201ENST00000325243 ATXN3LQ9H3M9 355 aa6.49□□□□□ -1.37
CBX3P1-201ENST00000325243 MBNL3Q9NUK0 354 aaKnown RBP6.49□□□□□ -1.37
CBX3P1-201ENST00000325243 GADD45BO75293 160 aaPredicted RBP6.48□□□□□ -1.37
CBX3P1-201ENST00000325243 RNASE1P07998 156 aaKnown RBP6.48□□□□□ -1.37
CBX3P1-201ENST00000325243 GSTP1P09211 210 aaKnown RBP6.48□□□□□ -1.37
CBX3P1-201ENST00000325243 HCLS1P14317 486 aaPredicted RBP6.48□□□□□ -1.37
CBX3P1-201ENST00000325243 NIF3L1Q9GZT8 377 aa6.48□□□□□ -1.37
CBX3P1-201ENST00000325243 BIN1O00499 593 aa6.47□□□□□ -1.37
CBX3P1-201ENST00000325243 SLFN14P0C7P3 912 aa6.47□□□□□ -1.37
CBX3P1-201ENST00000325243 PDZD3Q86UT5 571 aa6.47□□□□□ -1.37
CBX3P1-201ENST00000325243 EPS8L3Q8TE67 593 aaKnown RBP6.47□□□□□ -1.37
CBX3P1-201ENST00000325243 DNAJC25Q9H1X3 360 aa6.47□□□□□ -1.37
CBX3P1-201ENST00000325243 RC3H2Q9HBD1 1191 aaKnown RBP6.47□□□□□ -1.37
CBX3P1-201ENST00000325243 KRT82Q9NSB4 513 aa6.47□□□□□ -1.37
CBX3P1-201ENST00000325243 USTQ9Y2C2 406 aa6.47□□□□□ -1.37
CBX3P1-201ENST00000325243 RNGTTO60942 597 aaKnown RBP6.46□□□□□ -1.38
CBX3P1-201ENST00000325243 NEFMP07197 916 aa6.46□□□□□ -1.38
CBX3P1-201ENST00000325243 OXCT1P55809 520 aa6.46□□□□□ -1.38
CBX3P1-201ENST00000325243 PRKCQQ04759 706 aa6.46□□□□□ -1.38
CBX3P1-201ENST00000325243 ZNF124Q15973 351 aa6.46□□□□□ -1.38
CBX3P1-201ENST00000325243 ATG4DQ86TL0 474 aaPredicted RBP6.46□□□□□ -1.38
CBX3P1-201ENST00000325243 LRRN4CLQ8ND94 238 aa6.46□□□□□ -1.38
CBX3P1-201ENST00000325243 STK35Q8TDR2 534 aa6.46□□□□□ -1.38
CBX3P1-201ENST00000325243 CITED4Q96RK1 184 aa6.46□□□□□ -1.38
CBX3P1-201ENST00000325243 DUSP23Q9BVJ7 150 aa6.46□□□□□ -1.38
CBX3P1-201ENST00000325243 VAV3Q9UKW4 847 aa6.46□□□□□ -1.38
CBX3P1-201ENST00000325243 PLAGL2Q9UPG8 496 aa6.46□□□□□ -1.38
CBX3P1-201ENST00000325243 TRAK1Q9UPV9 953 aa6.46□□□□□ -1.38
CBX3P1-201ENST00000325243 IFI16Q16666 785 aaKnown RBP6.45□□□□□ -1.38
CBX3P1-201ENST00000325243 B4GALNT3Q6L9W6 998 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms